Click here to switch to the map view.

The map label for this gene is 150395287

Identifier: 150395287

GI number: 150395287

Start: 65391

End: 65936

Strand: Direct

Name: 150395287

Synonym: Smed_0059

Alternate gene names: NA

Gene position: 65391-65936 (Clockwise)

Preceding gene: 150395284

Following gene: 150395293

Centisome position: 1.73

GC content: 56.59

Gene sequence:

>546_bases
ATGGAAGCAGGGGGAAATCTGTACAGACTCGATCCTTCCAGTGAAGGAGCGGGCCCCGAGGTGGCGTCGGGGGCCTATTA
CGACCACATCAGGAAGATCAACGACGTCTTTGCCGATCAGATAAAGACGTCCGACCAGAAAGCGGCCTATATCTTCACTT
TCATGTTCGCCTTTCTGGTTACTTCGCAAGAAGGGCGCAGCGTCTTTGCCTGGCATCGCTACATGGAGGCCAGCAGCATT
TCGATGGTATTCTCGGCTATGCTGGCGCTTGCGTCTATCTTCTCGATCATATCGGCCATCCTCGTGGTGCTTCCCAGGAA
GAGCGCAACCTCGACGACATTGTTCTGGGGCGCCTGGTCCAAGCACCGCGACAGCTTTATCCGGGCGGCGGGAAGCGGCG
ACCAAGCCTATCTTTTCCGCCAATATGCCGAGAATGCGGATGCGCTTGCTGCGATCGCCTGTGGAAAATACCGCTGCGTC
AGCTTCGCCTTCCGCGGGCTGCTCGTGACAGTGCTTTCCTTTATCTGTCTCCTCGCGGTGAAATAG

Upstream 100 bases:

>100_bases
AGTGTATTTATAGGGAGGAAAAGTCAAGAGCCCAGTTTTGGGCCTATCTCTTTACTGGAGTGGTGTAATAAAGAGGAGAC
GGAATAAAGGGGAGCGGTGC

Downstream 100 bases:

>100_bases
ATTGCGCGGATTCCTTCTGCCCATCGCGAATGATGATCACGAATGCAGCCCAATCAAACCGGCATCAGTCCGAGCAGGCG
CTGCAGGAACTGCATGATCA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MEAGGNLYRLDPSSEGAGPEVASGAYYDHIRKINDVFADQIKTSDQKAAYIFTFMFAFLVTSQEGRSVFAWHRYMEASSI
SMVFSAMLALASIFSIISAILVVLPRKSATSTTLFWGAWSKHRDSFIRAAGSGDQAYLFRQYAENADALAAIACGKYRCV
SFAFRGLLVTVLSFICLLAVK

Sequences:

>Translated_181_residues
MEAGGNLYRLDPSSEGAGPEVASGAYYDHIRKINDVFADQIKTSDQKAAYIFTFMFAFLVTSQEGRSVFAWHRYMEASSI
SMVFSAMLALASIFSIISAILVVLPRKSATSTTLFWGAWSKHRDSFIRAAGSGDQAYLFRQYAENADALAAIACGKYRCV
SFAFRGLLVTVLSFICLLAVK
>Mature_181_residues
MEAGGNLYRLDPSSEGAGPEVASGAYYDHIRKINDVFADQIKTSDQKAAYIFTFMFAFLVTSQEGRSVFAWHRYMEASSI
SMVFSAMLALASIFSIISAILVVLPRKSATSTTLFWGAWSKHRDSFIRAAGSGDQAYLFRQYAENADALAAIACGKYRCV
SFAFRGLLVTVLSFICLLAVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19890; Mature: 19890

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEAGGNLYRLDPSSEGAGPEVASGAYYDHIRKINDVFADQIKTSDQKAAYIFTFMFAFLV
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TSQEGRSVFAWHRYMEASSISMVFSAMLALASIFSIISAILVVLPRKSATSTTLFWGAWS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH
KHRDSFIRAAGSGDQAYLFRQYAENADALAAIACGKYRCVSFAFRGLLVTVLSFICLLAV
HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
K
C
>Mature Secondary Structure
MEAGGNLYRLDPSSEGAGPEVASGAYYDHIRKINDVFADQIKTSDQKAAYIFTFMFAFLV
CCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
TSQEGRSVFAWHRYMEASSISMVFSAMLALASIFSIISAILVVLPRKSATSTTLFWGAWS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHH
KHRDSFIRAAGSGDQAYLFRQYAENADALAAIACGKYRCVSFAFRGLLVTVLSFICLLAV
HHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA