| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008251
Identifier: 150008251
GI number: 150008251
Start: 1899512
End: 1901866
Strand: Reverse
Name: 150008251
Synonym: BDI_1620
Alternate gene names: NA
Gene position: 1901866-1899512 (Counterclockwise)
Preceding gene: 150008254
Following gene: 150008250
Centisome position: 39.53
GC content: 45.27
Gene sequence:
>2355_bases ATGAAGAAAAAAAGCGTTTGGGCTTTAGCTTTAGCGGCGATGCTGATGTGGGTGGGGAAACCTGCGGCAGCGGCTGTGAA TGAGTCTTTTGACCCAGTAGAGTATGTAAACCCGCTAATGGGGACGCAATCTTCCTATGAGTTGTCTACAGGAAATACCT ATCCGGCGATCGCTCGTCCGTGGGGTATGAATTTCTGGACTCCTCAGACTGGTAAGATGGGAGATGGATGGCAGTATGTA TATACGGCTAACAAGATCCGTGGTTTTAAACAGACCCACCAGCCAAGTCCGTGGATCAATGATTACGGACAATTTGCGAT CATGCCGGTGGTTGGTAAACCGGAGTTCGACCAAGATAAACGTGCGAGCTGGTTCTCTCACAAAGGGGAGATCGCCAAGG CTTATTATTATAAGGTATATTTGGCGGAGCATGATGTGGTGACGGAATTAACGCCGACAGATCGTGCGGCTATGTTCCGT TTCACTTTCCCGGAAAACGAGCATTCTTATATCGTGGTGGATGCCTTGGATAAGGGCTCTTATATCAAGGTAATTCCGGA GGAGAATAAGATCATCGGTTATTCAACGAAGAATAGCGGTGGGGTTCCCGATAATTTCAAGAATTACTTTGTGATCGAGT TTGATAAACCTTTCACATACGAGGCTACATTTGCTGACGCTTCCTTGAAAGAGGGAACGAAGGAACAAACGAGTGACCAT GTAGGAGCCGTTATCGGTTTCAAGACGAAGAAAGGTGAGATCGTCCACGCTAAGGTGGCTTCCTCATTTATTAGCTTCGA TCAGGCCGCTATCAATATGAAGGAATTAGGTAACGATAACTTTGATACTTTGGTTCAGAAAGGTAAGGATGTTTGGAATG AGCATCTGAGCAAGATCGAGGTTGAAGGTGGAGATTTGGATCAATACCGTACTTTCTATTCTTGCTTCTATCGTTCATTG TTGTTCCCTCGTAAGTTCTATGAGATCAACGCTCAAGGCGAGGTGGTTCATTACAGCCCGTATAATGGTGAGGTATTACC CGGTTATATGTTTACCGATACCGGATTCTGGGATACGTTCCGTAGTTTGTTCCCATTCTTGAACTTGATGTTCCCGTCTG TAAACAAGGAAATGCAAGAGGGTTTGATCAATACGTATAAGGAAAGCGGCTTCTTCCCGGAATGGGCAAGTCCGGGCCAC CGTGGTTGCATGGTCGGTAATAACTCGGCATCTATCTTGGTAGACGCTTATATGAAAGGCGTGAAGGTTGACGATTTGGA GACTCTATATAAAGGTTTGATCCATGGTACGGAAAACGTTCATCCGACGGTTTCTTCTACAGGACGTCTGGGGCATGAAT ATTATAATAAGTTGGGATATGTTCCTTACGATGTGAAGATTAACGAGAATGCCGCTCGTACATTGGAATATGCTTACAAT GACTGGTGTATCTGGCAGATCGCTAAACAACTAGGCCGTCCGAAAAAGGAATTGGATTTATATGCCCGTCGTGCGTTGAA CTATAAGAACCTGTACGACAAGGAAACCAAGTTGATGCGTGGCAAGAATGAGAATGGCGAGTTCATGGCTCCGTTCTCTC CGCTGAAATGGGGTGACGCTTTCACGGAAGGTAATAGCTGGCACTATTCATGGTCTGTATTCCACGATCCTCAGGGATTG ATCGACTTGATGGGCGGTAAGGATTCATTTGTGATGATGCTTGACTCCGTATTTGCTGTGCCGCCTTTGTTCGATGATAG CTACTACGGTGGTGTGATCCACGAGATCCGCGAGATGACCGTGATGAATATGGGTAACTACGCTCACGGTAACCAGCCGA TCCAGCATATGATTTATTTATACAACTATGCGGGTCAACCTTGGAAGGCTCAATATTGGTTGCGTCAAGTAATGAATAAG ATGTATACTCCGGGTCCGGATGGTTATTGCGGTGATGAGGATAATGGCCAGACTTCCGCTTGGTATGTATTCTCAGCGTT AGGATTCTATCCGGTAGCTCCGGGTACGACCCAATATGTGTTGGGCGCTCCGCTGTTCAAGAAGGCTACGATCCATTTTG AGAATGGAAACAACTTGGTGATCAACGCCCCGAACAACAGCGATAAGAATATCTATATCGAATCTATGACGTTCAACGGC AAGAACTACACCAAGAATTATTTGGATCATAACGATTTGTTTAAGGGTGGCGTGATTGACTTCAAGATGGGTGACAAGCC GAATATGAATCGTGGTATTAATCCGGAGGATATGCCTTACTCATTCTCCGTAAACGAGGAAGGGATCAATAAACTTTCCC CTATTTCCGTAAAACCTAGTAAAAAGAAGAAATAA
Upstream 100 bases:
>100_bases TCACTTTCTATTCATGTTAATTAAATGGATATTTGTAGTCTAACTATGAATATAAAACACAAAAACGGATAAATTATATT ATTAATTAAATAGCTATATC
Downstream 100 bases:
>100_bases GCAATTAAGATGAATTTCATTCATAAACCATTAATGTCAGGCATAGCGATATGCCTGACATTTTTCGCATACTCCTGTGC TACACCGGAGAAGATGGAAA
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Sugar Hydrolase; Secreted Protein; Glycoside Hydrolase Family Protein; Glycosyl Hydrolase Family; Outer Membrane Protein; Immunoreactive; Cell Wall Antigen; Glycosyl Hydrolase; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Mannosidase
Number of amino acids: Translated: 784; Mature: 784
Protein sequence:
>784_residues MKKKSVWALALAAMLMWVGKPAAAAVNESFDPVEYVNPLMGTQSSYELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYV YTANKIRGFKQTHQPSPWINDYGQFAIMPVVGKPEFDQDKRASWFSHKGEIAKAYYYKVYLAEHDVVTELTPTDRAAMFR FTFPENEHSYIVVDALDKGSYIKVIPEENKIIGYSTKNSGGVPDNFKNYFVIEFDKPFTYEATFADASLKEGTKEQTSDH VGAVIGFKTKKGEIVHAKVASSFISFDQAAINMKELGNDNFDTLVQKGKDVWNEHLSKIEVEGGDLDQYRTFYSCFYRSL LFPRKFYEINAQGEVVHYSPYNGEVLPGYMFTDTGFWDTFRSLFPFLNLMFPSVNKEMQEGLINTYKESGFFPEWASPGH RGCMVGNNSASILVDAYMKGVKVDDLETLYKGLIHGTENVHPTVSSTGRLGHEYYNKLGYVPYDVKINENAARTLEYAYN DWCIWQIAKQLGRPKKELDLYARRALNYKNLYDKETKLMRGKNENGEFMAPFSPLKWGDAFTEGNSWHYSWSVFHDPQGL IDLMGGKDSFVMMLDSVFAVPPLFDDSYYGGVIHEIREMTVMNMGNYAHGNQPIQHMIYLYNYAGQPWKAQYWLRQVMNK MYTPGPDGYCGDEDNGQTSAWYVFSALGFYPVAPGTTQYVLGAPLFKKATIHFENGNNLVINAPNNSDKNIYIESMTFNG KNYTKNYLDHNDLFKGGVIDFKMGDKPNMNRGINPEDMPYSFSVNEEGINKLSPISVKPSKKKK
Sequences:
>Translated_784_residues MKKKSVWALALAAMLMWVGKPAAAAVNESFDPVEYVNPLMGTQSSYELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYV YTANKIRGFKQTHQPSPWINDYGQFAIMPVVGKPEFDQDKRASWFSHKGEIAKAYYYKVYLAEHDVVTELTPTDRAAMFR FTFPENEHSYIVVDALDKGSYIKVIPEENKIIGYSTKNSGGVPDNFKNYFVIEFDKPFTYEATFADASLKEGTKEQTSDH VGAVIGFKTKKGEIVHAKVASSFISFDQAAINMKELGNDNFDTLVQKGKDVWNEHLSKIEVEGGDLDQYRTFYSCFYRSL LFPRKFYEINAQGEVVHYSPYNGEVLPGYMFTDTGFWDTFRSLFPFLNLMFPSVNKEMQEGLINTYKESGFFPEWASPGH RGCMVGNNSASILVDAYMKGVKVDDLETLYKGLIHGTENVHPTVSSTGRLGHEYYNKLGYVPYDVKINENAARTLEYAYN DWCIWQIAKQLGRPKKELDLYARRALNYKNLYDKETKLMRGKNENGEFMAPFSPLKWGDAFTEGNSWHYSWSVFHDPQGL IDLMGGKDSFVMMLDSVFAVPPLFDDSYYGGVIHEIREMTVMNMGNYAHGNQPIQHMIYLYNYAGQPWKAQYWLRQVMNK MYTPGPDGYCGDEDNGQTSAWYVFSALGFYPVAPGTTQYVLGAPLFKKATIHFENGNNLVINAPNNSDKNIYIESMTFNG KNYTKNYLDHNDLFKGGVIDFKMGDKPNMNRGINPEDMPYSFSVNEEGINKLSPISVKPSKKKK >Mature_784_residues MKKKSVWALALAAMLMWVGKPAAAAVNESFDPVEYVNPLMGTQSSYELSTGNTYPAIARPWGMNFWTPQTGKMGDGWQYV YTANKIRGFKQTHQPSPWINDYGQFAIMPVVGKPEFDQDKRASWFSHKGEIAKAYYYKVYLAEHDVVTELTPTDRAAMFR FTFPENEHSYIVVDALDKGSYIKVIPEENKIIGYSTKNSGGVPDNFKNYFVIEFDKPFTYEATFADASLKEGTKEQTSDH VGAVIGFKTKKGEIVHAKVASSFISFDQAAINMKELGNDNFDTLVQKGKDVWNEHLSKIEVEGGDLDQYRTFYSCFYRSL LFPRKFYEINAQGEVVHYSPYNGEVLPGYMFTDTGFWDTFRSLFPFLNLMFPSVNKEMQEGLINTYKESGFFPEWASPGH RGCMVGNNSASILVDAYMKGVKVDDLETLYKGLIHGTENVHPTVSSTGRLGHEYYNKLGYVPYDVKINENAARTLEYAYN DWCIWQIAKQLGRPKKELDLYARRALNYKNLYDKETKLMRGKNENGEFMAPFSPLKWGDAFTEGNSWHYSWSVFHDPQGL IDLMGGKDSFVMMLDSVFAVPPLFDDSYYGGVIHEIREMTVMNMGNYAHGNQPIQHMIYLYNYAGQPWKAQYWLRQVMNK MYTPGPDGYCGDEDNGQTSAWYVFSALGFYPVAPGTTQYVLGAPLFKKATIHFENGNNLVINAPNNSDKNIYIESMTFNG KNYTKNYLDHNDLFKGGVIDFKMGDKPNMNRGINPEDMPYSFSVNEEGINKLSPISVKPSKKKK
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 89285; Mature: 89285
Theoretical pI: Translated: 6.56; Mature: 6.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKSVWALALAAMLMWVGKPAAAAVNESFDPVEYVNPLMGTQSSYELSTGNTYPAIARP CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCC WGMNFWTPQTGKMGDGWQYVYTANKIRGFKQTHQPSPWINDYGQFAIMPVVGKPEFDQDK CCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCH RASWFSHKGEIAKAYYYKVYLAEHDVVTELTPTDRAAMFRFTFPENEHSYIVVDALDKGS HHHHHHCCCCEEEEEEEEEEEECCCEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCC YIKVIPEENKIIGYSTKNSGGVPDNFKNYFVIEFDKPFTYEATFADASLKEGTKEQTSDH EEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHCCCHHHHCCC VGAVIGFKTKKGEIVHAKVASSFISFDQAAINMKELGNDNFDTLVQKGKDVWNEHLSKIE CEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEE VEGGDLDQYRTFYSCFYRSLLFPRKFYEINAQGEVVHYSPYNGEVLPGYMFTDTGFWDTF ECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEECCEEEECCCHHHHH RSLFPFLNLMFPSVNKEMQEGLINTYKESGFFPEWASPGHRGCMVGNNSASILVDAYMKG HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEHHHCC VKVDDLETLYKGLIHGTENVHPTVSSTGRLGHEYYNKLGYVPYDVKINENAARTLEYAYN CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHCC DWCIWQIAKQLGRPKKELDLYARRALNYKNLYDKETKLMRGKNENGEFMAPFSPLKWGDA CCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC FTEGNSWHYSWSVFHDPQGLIDLMGGKDSFVMMLDSVFAVPPLFDDSYYGGVIHEIREMT CCCCCCEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VMNMGNYAHGNQPIQHMIYLYNYAGQPWKAQYWLRQVMNKMYTPGPDGYCGDEDNGQTSA HHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH WYVFSALGFYPVAPGTTQYVLGAPLFKKATIHFENGNNLVINAPNNSDKNIYIESMTFNG EEEEECCCCEECCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEEECC KNYTKNYLDHNDLFKGGVIDFKMGDKPNMNRGINPEDMPYSFSVNEEGINKLSPISVKPS CCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCCC KKKK CCCC >Mature Secondary Structure MKKKSVWALALAAMLMWVGKPAAAAVNESFDPVEYVNPLMGTQSSYELSTGNTYPAIARP CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCC WGMNFWTPQTGKMGDGWQYVYTANKIRGFKQTHQPSPWINDYGQFAIMPVVGKPEFDQDK CCCCCCCCCCCCCCCCEEEEEEHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCCCCCH RASWFSHKGEIAKAYYYKVYLAEHDVVTELTPTDRAAMFRFTFPENEHSYIVVDALDKGS HHHHHHCCCCEEEEEEEEEEEECCCEEEECCCCCCEEEEEEECCCCCCCEEEEEECCCCC YIKVIPEENKIIGYSTKNSGGVPDNFKNYFVIEFDKPFTYEATFADASLKEGTKEQTSDH EEEEECCCCEEEEEECCCCCCCCCCCCCEEEEEECCCCEEEEEECCCHHHCCCHHHHCCC VGAVIGFKTKKGEIVHAKVASSFISFDQAAINMKELGNDNFDTLVQKGKDVWNEHLSKIE CEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHEEE VEGGDLDQYRTFYSCFYRSLLFPRKFYEINAQGEVVHYSPYNGEVLPGYMFTDTGFWDTF ECCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCEEEECCCCCCEECCEEEECCCHHHHH RSLFPFLNLMFPSVNKEMQEGLINTYKESGFFPEWASPGHRGCMVGNNSASILVDAYMKG HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCEEEEEHHHCC VKVDDLETLYKGLIHGTENVHPTVSSTGRLGHEYYNKLGYVPYDVKINENAARTLEYAYN CCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEEECCCHHHHHHHHCC DWCIWQIAKQLGRPKKELDLYARRALNYKNLYDKETKLMRGKNENGEFMAPFSPLKWGDA CCHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCC FTEGNSWHYSWSVFHDPQGLIDLMGGKDSFVMMLDSVFAVPPLFDDSYYGGVIHEIREMT CCCCCCEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH VMNMGNYAHGNQPIQHMIYLYNYAGQPWKAQYWLRQVMNKMYTPGPDGYCGDEDNGQTSA HHCCCCCCCCCCHHHHHEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH WYVFSALGFYPVAPGTTQYVLGAPLFKKATIHFENGNNLVINAPNNSDKNIYIESMTFNG EEEEECCCCEECCCCCCCEEECCCCEEEEEEEEECCCEEEEECCCCCCCEEEEEEEEECC KNYTKNYLDHNDLFKGGVIDFKMGDKPNMNRGINPEDMPYSFSVNEEGINKLSPISVKPS CCCCHHHCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCHHCCCCCCCCCCCCC KKKK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA