| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008250
Identifier: 150008250
GI number: 150008250
Start: 1897232
End: 1899502
Strand: Reverse
Name: 150008250
Synonym: BDI_1619
Alternate gene names: NA
Gene position: 1899502-1897232 (Counterclockwise)
Preceding gene: 150008251
Following gene: 150008249
Centisome position: 39.48
GC content: 47.03
Gene sequence:
>2271_bases ATGAATTTCATTCATAAACCATTAATGTCAGGCATAGCGATATGCCTGACATTTTTCGCATACTCCTGTGCTACACCGGA GAAGATGGAAAACAAGACAGACTTTACCGCATATGTAGATCCTTATATCGGATCGGGAGAGCACGGACACGTATTTGTCG GGGCGAACGTTCCGTTTGGAGCTGTTCAGGTAGGTCCTCAGAATATTTTTAAGGGATGGGACTGGTGTTCCGGTTATCAT TACTCCGATAGTATCATTATCGGATTTAGTCATACGCATTTGAGCGGAACCGGATGTTCTGATCTGGGGGATATCCTTCT GATGCCTTATACGGGCGAGGTACGTACCGCCCGTGGCGAGCAAGATAATATAGAGGGAGCCGCTTCTTCCTATTATAAAC ATGCCAACGAAGCCGTAGCTCCGGGATATTACTCTTTGCTGATGGATAATGGCGTAAAGGCGGAGTTGACAGCGACCGAG CGTGTAGCCTTACATCGTTATACGTATCCGTCGGGAAGTGAGCATCGCCTCTTGATCAACTTGAAGGAGGGTATCGGTGA TAAAGCGTATGACACTTATTTGAAGAAGATTGATGAGTACACGATCGAGGGGTACCGCTTTTCCAAAGGTTGGAGCCCAC GTCACAAAGTATTCTTTACGTTGAAATGTGATCAGCCGATCGAGTCTTTGGCTGTATTCAACGATGATGAGGCCGCAGGT AATGATGAGTTGACGGGCGAGTCCGTTAAGGGAGTGATTACCTTTAAGGGAGATGCCCCGACCGCCTTGGTAAAGGTCGC TATCTCTTCCGTAAGTTGTGAGAATGCCTTGGCTAACTTACGTACGGAGCTTTCTCATTGGGATTTCGACGAGGTTCGTA ACGAGGCTATCGATAAATGGAATGACCAATTGTCTTGTATCTCCATCGATACGAAAGATGAGCGTGCCAAGAAGATTTTC TATACCGCCATGTACCATGCGTTTATCGCTCCGACGTTGTATTGCGACGCGAATGGCGATTTCCGTGGCCATGACGATAA GGTGTATACGAACAATACTTGGAAGAACTATTCCACTTTCTCTCTATGGGATACGTATCGTACCTTGCATCCGTTGTTCA CGATTATCAAGCCTCAATATGTGTCGGATTTGGTGAACTCGATGTTAAGCATTTACGACCAGCAAGAGAAATTACCGATC TGGCCGTTGATTGGTGGTGAGACGGACCAAATGCCGGGATATAGCGCTGTGCCTATTATCGCAGATGCCTATCTGAAAGG TTTTACCGGCTTTGACGCCGACCGTGCGTATCGTTATATGGTTGCTTCATCTGTCTATGAGAAGCAAAACGGGGTGCCGT ACGTGTTGGAAAAAGGCTATATCCCTTGTGATAAGGTACGTGAGGCTACTTCTATCGCGATGGAATATGCCGCTGATGAT TGGGGTATCGCCTTGATGGCGAAAAAAATGGGCAAGACGGAGGATTACCAAAATTACTTGAAACGTGGTAAATATTATAC GCAGTATTTCGATAAGGATATCAACTTTATCCGTCCGAAAATGAATGATGGCAGCTGGCGTACGCCGTACGATCCGATCC AGTCCATACATAGCGTAGGCGATTTCTGTGAGGGAAATGGCTGGCATTATACATTCTTCGTGCCCCAGCATCCGGAAGGC TTGATCGAGTTGATGGGTGGTGACGCTCCGTTTATCTCGAAACTGGATTCTTTGTTCTTGGTGGAAGGTGAGTTAGGGGA GAACGCCTCTCCGGATATCAGTGGCTTGATCGGCATGTACGCCCATGGAAATGAGCCGAGCCATCATGTTACTTACTTGT ATCCTTACGCCGGCGAGCAATGGAAGACAGCCGAGAAAGTTCGTTACATTCAAGATGTGTTCTATACCGACCAGCCGGAA GGCATCATCGGAAACGAGGATTGTGGCCAGATGTCCGCTTGGCATATCATGTCTGCCTTGGGATTTTACCAAGTGAATCC TTCCAATGGCGTATTCGTGTTCGGTAGCCCGTTATTCGATAAGGCTTCCGTTCATTTGCCGGAGGGTAAGACTTTCGAGG TCGTAGCCCAGAACAACAGCAAGGAGAATGTATATATCCAATCCGTGTTGCTAAATGGTAAACCTTATAACAATTCTTAT ATTCTGTATGATGATATCGTGAAGGGAGGGAATCTTACCTTTGTGATGGGCAACACGCCGAATAAGGAGTTCGGAGCTGC CCCGGAAAATCGTCCGAAGACGGCTGAGTAA
Upstream 100 bases:
>100_bases GGAGGATATGCCTTACTCATTCTCCGTAAACGAGGAAGGGATCAATAAACTTTCCCCTATTTCCGTAAAACCTAGTAAAA AGAAGAAATAAGCAATTAAG
Downstream 100 bases:
>100_bases ATAGCTCCCTTACCAGTGAGCGGTTTGCTCTGTTACCCGTGAGACAACGTCTCACGGATTGCCGGGAAAGTACCCGGCTG AGGAGCAAAGAATAATTAAC
Product: glycoside hydrolase family protein
Products: NA
Alternate protein names: Alpha-1 2-Mannosidase Family Protein; Glycoside Hydrolase Family; Glycosyl Hydrolase Family; Secreted Protein; Sugar Hydrolase; Glycoside Hydrolase Family Protein; Outer Membrane Protein; Immunoreactive; Exported Alpha-1 2-Mannosidase; Antigen; Glycosyltransferase; Alpha-1 2-Mannosidase Protein; Lipoprotein
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MNFIHKPLMSGIAICLTFFAYSCATPEKMENKTDFTAYVDPYIGSGEHGHVFVGANVPFGAVQVGPQNIFKGWDWCSGYH YSDSIIIGFSHTHLSGTGCSDLGDILLMPYTGEVRTARGEQDNIEGAASSYYKHANEAVAPGYYSLLMDNGVKAELTATE RVALHRYTYPSGSEHRLLINLKEGIGDKAYDTYLKKIDEYTIEGYRFSKGWSPRHKVFFTLKCDQPIESLAVFNDDEAAG NDELTGESVKGVITFKGDAPTALVKVAISSVSCENALANLRTELSHWDFDEVRNEAIDKWNDQLSCISIDTKDERAKKIF YTAMYHAFIAPTLYCDANGDFRGHDDKVYTNNTWKNYSTFSLWDTYRTLHPLFTIIKPQYVSDLVNSMLSIYDQQEKLPI WPLIGGETDQMPGYSAVPIIADAYLKGFTGFDADRAYRYMVASSVYEKQNGVPYVLEKGYIPCDKVREATSIAMEYAADD WGIALMAKKMGKTEDYQNYLKRGKYYTQYFDKDINFIRPKMNDGSWRTPYDPIQSIHSVGDFCEGNGWHYTFFVPQHPEG LIELMGGDAPFISKLDSLFLVEGELGENASPDISGLIGMYAHGNEPSHHVTYLYPYAGEQWKTAEKVRYIQDVFYTDQPE GIIGNEDCGQMSAWHIMSALGFYQVNPSNGVFVFGSPLFDKASVHLPEGKTFEVVAQNNSKENVYIQSVLLNGKPYNNSY ILYDDIVKGGNLTFVMGNTPNKEFGAAPENRPKTAE
Sequences:
>Translated_756_residues MNFIHKPLMSGIAICLTFFAYSCATPEKMENKTDFTAYVDPYIGSGEHGHVFVGANVPFGAVQVGPQNIFKGWDWCSGYH YSDSIIIGFSHTHLSGTGCSDLGDILLMPYTGEVRTARGEQDNIEGAASSYYKHANEAVAPGYYSLLMDNGVKAELTATE RVALHRYTYPSGSEHRLLINLKEGIGDKAYDTYLKKIDEYTIEGYRFSKGWSPRHKVFFTLKCDQPIESLAVFNDDEAAG NDELTGESVKGVITFKGDAPTALVKVAISSVSCENALANLRTELSHWDFDEVRNEAIDKWNDQLSCISIDTKDERAKKIF YTAMYHAFIAPTLYCDANGDFRGHDDKVYTNNTWKNYSTFSLWDTYRTLHPLFTIIKPQYVSDLVNSMLSIYDQQEKLPI WPLIGGETDQMPGYSAVPIIADAYLKGFTGFDADRAYRYMVASSVYEKQNGVPYVLEKGYIPCDKVREATSIAMEYAADD WGIALMAKKMGKTEDYQNYLKRGKYYTQYFDKDINFIRPKMNDGSWRTPYDPIQSIHSVGDFCEGNGWHYTFFVPQHPEG LIELMGGDAPFISKLDSLFLVEGELGENASPDISGLIGMYAHGNEPSHHVTYLYPYAGEQWKTAEKVRYIQDVFYTDQPE GIIGNEDCGQMSAWHIMSALGFYQVNPSNGVFVFGSPLFDKASVHLPEGKTFEVVAQNNSKENVYIQSVLLNGKPYNNSY ILYDDIVKGGNLTFVMGNTPNKEFGAAPENRPKTAE >Mature_756_residues MNFIHKPLMSGIAICLTFFAYSCATPEKMENKTDFTAYVDPYIGSGEHGHVFVGANVPFGAVQVGPQNIFKGWDWCSGYH YSDSIIIGFSHTHLSGTGCSDLGDILLMPYTGEVRTARGEQDNIEGAASSYYKHANEAVAPGYYSLLMDNGVKAELTATE RVALHRYTYPSGSEHRLLINLKEGIGDKAYDTYLKKIDEYTIEGYRFSKGWSPRHKVFFTLKCDQPIESLAVFNDDEAAG NDELTGESVKGVITFKGDAPTALVKVAISSVSCENALANLRTELSHWDFDEVRNEAIDKWNDQLSCISIDTKDERAKKIF YTAMYHAFIAPTLYCDANGDFRGHDDKVYTNNTWKNYSTFSLWDTYRTLHPLFTIIKPQYVSDLVNSMLSIYDQQEKLPI WPLIGGETDQMPGYSAVPIIADAYLKGFTGFDADRAYRYMVASSVYEKQNGVPYVLEKGYIPCDKVREATSIAMEYAADD WGIALMAKKMGKTEDYQNYLKRGKYYTQYFDKDINFIRPKMNDGSWRTPYDPIQSIHSVGDFCEGNGWHYTFFVPQHPEG LIELMGGDAPFISKLDSLFLVEGELGENASPDISGLIGMYAHGNEPSHHVTYLYPYAGEQWKTAEKVRYIQDVFYTDQPE GIIGNEDCGQMSAWHIMSALGFYQVNPSNGVFVFGSPLFDKASVHLPEGKTFEVVAQNNSKENVYIQSVLLNGKPYNNSY ILYDDIVKGGNLTFVMGNTPNKEFGAAPENRPKTAE
Specific function: Unknown
COG id: COG3537
COG function: function code G; Putative alpha-1,2-mannosidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84872; Mature: 84872
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFIHKPLMSGIAICLTFFAYSCATPEKMENKTDFTAYVDPYIGSGEHGHVFVGANVPFG CCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCC AVQVGPQNIFKGWDWCSGYHYSDSIIIGFSHTHLSGTGCSDLGDILLMPYTGEVRTARGE EEEECHHHHHCCCCCCCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCC QDNIEGAASSYYKHANEAVAPGYYSLLMDNGVKAELTATERVALHRYTYPSGSEHRLLIN CCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHEEEEEEEECCCCCCCEEEEE LKEGIGDKAYDTYLKKIDEYTIEGYRFSKGWSPRHKVFFTLKCDQPIESLAVFNDDEAAG ECCCCCCHHHHHHHHHHHHHEECCEEECCCCCCCCEEEEEEECCCCHHHHEEECCCCCCC NDELTGESVKGVITFKGDAPTALVKVAISSVSCENALANLRTELSHWDFDEVRNEAIDKW CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH NDQLSCISIDTKDERAKKIFYTAMYHAFIAPTLYCDANGDFRGHDDKVYTNNTWKNYSTF CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCCCEE SLWDTYRTLHPLFTIIKPQYVSDLVNSMLSIYDQQEKLPIWPLIGGETDQMPGYSAVPII EHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHH ADAYLKGFTGFDADRAYRYMVASSVYEKQNGVPYVLEKGYIPCDKVREATSIAMEYAADD HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC WGIALMAKKMGKTEDYQNYLKRGKYYTQYFDKDINFIRPKMNDGSWRTPYDPIQSIHSVG CCHHHHHHHCCCCHHHHHHHHCCCEEEHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHH DFCEGNGWHYTFFVPQHPEGLIELMGGDAPFISKLDSLFLVEGELGENASPDISGLIGMY HHHCCCCEEEEEEECCCCCHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHEEEE AHGNEPSHHVTYLYPYAGEQWKTAEKVRYIQDVFYTDQPEGIIGNEDCGQMSAWHIMSAL ECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH GFYQVNPSNGVFVFGSPLFDKASVHLPEGKTFEVVAQNNSKENVYIQSVLLNGKPYNNSY CEEEECCCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCE ILYDDIVKGGNLTFVMGNTPNKEFGAAPENRPKTAE EEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MNFIHKPLMSGIAICLTFFAYSCATPEKMENKTDFTAYVDPYIGSGEHGHVFVGANVPFG CCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCCCC AVQVGPQNIFKGWDWCSGYHYSDSIIIGFSHTHLSGTGCSDLGDILLMPYTGEVRTARGE EEEECHHHHHCCCCCCCCCEECCEEEEEEEECCCCCCCCCCCCCEEEECCCCCEEECCCC QDNIEGAASSYYKHANEAVAPGYYSLLMDNGVKAELTATERVALHRYTYPSGSEHRLLIN CCCCCHHHHHHHHHCCCCCCCCHHHHHHCCCCEEEEEHHHEEEEEEEECCCCCCCEEEEE LKEGIGDKAYDTYLKKIDEYTIEGYRFSKGWSPRHKVFFTLKCDQPIESLAVFNDDEAAG ECCCCCCHHHHHHHHHHHHHEECCEEECCCCCCCCEEEEEEECCCCHHHHEEECCCCCCC NDELTGESVKGVITFKGDAPTALVKVAISSVSCENALANLRTELSHWDFDEVRNEAIDKW CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHH NDQLSCISIDTKDERAKKIFYTAMYHAFIAPTLYCDANGDFRGHDDKVYTNNTWKNYSTF CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEECCCCCCCCEE SLWDTYRTLHPLFTIIKPQYVSDLVNSMLSIYDQQEKLPIWPLIGGETDQMPGYSAVPII EHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHH ADAYLKGFTGFDADRAYRYMVASSVYEKQNGVPYVLEKGYIPCDKVREATSIAMEYAADD HHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHCCCC WGIALMAKKMGKTEDYQNYLKRGKYYTQYFDKDINFIRPKMNDGSWRTPYDPIQSIHSVG CCHHHHHHHCCCCHHHHHHHHCCCEEEHHHHCCCCEECCCCCCCCCCCCHHHHHHHHHHH DFCEGNGWHYTFFVPQHPEGLIELMGGDAPFISKLDSLFLVEGELGENASPDISGLIGMY HHHCCCCEEEEEEECCCCCHHHHHHCCCCHHHHHCCCEEEEECCCCCCCCCCHHHHEEEE AHGNEPSHHVTYLYPYAGEQWKTAEKVRYIQDVFYTDQPEGIIGNEDCGQMSAWHIMSAL ECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHH GFYQVNPSNGVFVFGSPLFDKASVHLPEGKTFEVVAQNNSKENVYIQSVLLNGKPYNNSY CEEEECCCCCEEEECCCCCCCCEEECCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCCE ILYDDIVKGGNLTFVMGNTPNKEFGAAPENRPKTAE EEEEHEECCCCEEEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA