| Definition | Parabacteroides distasonis ATCC 8503 chromosome, complete genome. |
|---|---|
| Accession | NC_009615 |
| Length | 4,811,379 |
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The map label for this gene is 150008254
Identifier: 150008254
GI number: 150008254
Start: 1907691
End: 1909283
Strand: Reverse
Name: 150008254
Synonym: BDI_1623
Alternate gene names: NA
Gene position: 1909283-1907691 (Counterclockwise)
Preceding gene: 150008255
Following gene: 150008251
Centisome position: 39.68
GC content: 41.68
Gene sequence:
>1593_bases ATGAAAAAAATATTAACAACGGCTATTTTATGTGCGGGATTGGTAGGATTTACCGCATGTGACAGTTTTTTGGATGAGGA ACCAAAGTCATCCTTGACGCTGGATACCTATTATAAGACAAGTGCTGATATTATTGGCAATGTCAATTATCTATATCGTG ACGGTGCTCCCGATAAGATGGGTAATATGACAGGCGCTTATAGAGGTTCTAGCTTGTCAGTAATGAACATGGTAACTGGT TATTTTGTGAATGAGTATGAAGGCCAGGAAGTAGACTGTTCTTATGCTCGCCAGTTGACTCGTCAGAACTTTACGCAATC TTGTTGTAATTATTTGACTAATGACACATGGAAAGGTTGTTATAAGTCGATCAATGTAGCTAACGCAGTTATTAAATATG TGGATGGCGTAGAGATGGACGGACAAGCTCAGTATAAAGCAGAGGCTCGTTTCTTCCGTGCGCTAAACTATTTCTATCTT GTGAAGATGTTTGGTGATGTTCCAATGATTACAGAGCCAACAGAAGATGCTACTTTGGTTGAATATCCGGCTCGTACAGC TGCGTCGGAGGTTTACAAAACTGTTATTATTCCTGATTTACAGTTTGCTGTAGAGAATTTGCCTGATGCTACTTTCGCGG GAAATAGTCACCGTGTGACAAAATATGCGGCTGATATGTTGCTGGCCGATGTTTACATGCGACTAGGCGAGTACGCTAAT GCGATTACTCCATTGAAAGATGTAATCAATAGCGGAAAATTCGCTTTGGCTACTAACGATAACCTTGCGGAAGGTAGTGC GTTCAATAAGTTACGTACAACAGATGATCTGCCAGAGGTTATTTATGCCCGTGAATATGATGCGGCTATTTCTCCTAACG GTAATATCCCTGTTCACGCATTCAATTTGATTTCTCCGACATTCTTCGCCAACTCTTCTACTGGAAACAAGTACTCTTTG TGGGTAAATGTGTATGGTGTTAGCGAGCGTTATTTAAATGTGTATGGTGAGAAAGACTTGCGTGCCCAGATGAATCAGTT CTTCCATCGTACATATACACATCCGGTTGATGGAACAACTTTGGATATGAAGATGCTTTGTAACTGGTACTGGTACGATG AAACTGCTATCTTAGAGACTGGTAAGGGTACGAAAGACTGGAACTTCTATCGTTATGCTGAAACATTATTATCTGCCGCT GAAGCTATCGCTCAGTCTAGTGGTGTAAACGCTGAGGCTGCCGGCTATTTGGCACAAGTTAAGGCACGTGCTAATATGGA AGGTAAGGATGTTTCTACAATCGCTTCCGAGCTTCAAAGATTAGGCAAGCAAGCTTTTATTGAAGAGTGCTGGAAAGAGC GTTTACGTGAGTTCCCATTGGAAATGAAGATTTGGGATGACTGTGTTCGTACAGGTAAATTCCCTCAAATCTCCGCTACA AACAAGGGTGAGGTTCAATTTGTTGATTTGATCGGTGCTACGAATGGTAGTGGTGCTAAGTTCAAGGAGACAGACCTATA CTGGCCGATCCCTGTAAATGAAATACAGCGTAACCCGAATTTAACTCAGAATGAGGGATATTCTGCGAAGTAA
Upstream 100 bases:
>100_bases TTTGGTCAGAATATGGCCTTCTTCTCTTATCCGAGAGCTAGAACGTTTACGTTGGGTGTAAATGTAACATTTTAATTAAT TAATTATTCAGAAAATTGCG
Downstream 100 bases:
>100_bases TATTTTTTATTTTAATAACTGATGGTTTTAAAGGGGAGGATGAGTTTTTCATTCTCTCCTTTTTATTCATTGCCACATTC ATATTAGTGTACAATTATTA
Product: hypothetical protein
Products: NA
Alternate protein names: RagB/SusD Domain-Containing Protein; Outer Membrane Protein; Ragb/Susd Domain Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein
Number of amino acids: Translated: 530; Mature: 530
Protein sequence:
>530_residues MKKILTTAILCAGLVGFTACDSFLDEEPKSSLTLDTYYKTSADIIGNVNYLYRDGAPDKMGNMTGAYRGSSLSVMNMVTG YFVNEYEGQEVDCSYARQLTRQNFTQSCCNYLTNDTWKGCYKSINVANAVIKYVDGVEMDGQAQYKAEARFFRALNYFYL VKMFGDVPMITEPTEDATLVEYPARTAASEVYKTVIIPDLQFAVENLPDATFAGNSHRVTKYAADMLLADVYMRLGEYAN AITPLKDVINSGKFALATNDNLAEGSAFNKLRTTDDLPEVIYAREYDAAISPNGNIPVHAFNLISPTFFANSSTGNKYSL WVNVYGVSERYLNVYGEKDLRAQMNQFFHRTYTHPVDGTTLDMKMLCNWYWYDETAILETGKGTKDWNFYRYAETLLSAA EAIAQSSGVNAEAAGYLAQVKARANMEGKDVSTIASELQRLGKQAFIEECWKERLREFPLEMKIWDDCVRTGKFPQISAT NKGEVQFVDLIGATNGSGAKFKETDLYWPIPVNEIQRNPNLTQNEGYSAK
Sequences:
>Translated_530_residues MKKILTTAILCAGLVGFTACDSFLDEEPKSSLTLDTYYKTSADIIGNVNYLYRDGAPDKMGNMTGAYRGSSLSVMNMVTG YFVNEYEGQEVDCSYARQLTRQNFTQSCCNYLTNDTWKGCYKSINVANAVIKYVDGVEMDGQAQYKAEARFFRALNYFYL VKMFGDVPMITEPTEDATLVEYPARTAASEVYKTVIIPDLQFAVENLPDATFAGNSHRVTKYAADMLLADVYMRLGEYAN AITPLKDVINSGKFALATNDNLAEGSAFNKLRTTDDLPEVIYAREYDAAISPNGNIPVHAFNLISPTFFANSSTGNKYSL WVNVYGVSERYLNVYGEKDLRAQMNQFFHRTYTHPVDGTTLDMKMLCNWYWYDETAILETGKGTKDWNFYRYAETLLSAA EAIAQSSGVNAEAAGYLAQVKARANMEGKDVSTIASELQRLGKQAFIEECWKERLREFPLEMKIWDDCVRTGKFPQISAT NKGEVQFVDLIGATNGSGAKFKETDLYWPIPVNEIQRNPNLTQNEGYSAK >Mature_530_residues MKKILTTAILCAGLVGFTACDSFLDEEPKSSLTLDTYYKTSADIIGNVNYLYRDGAPDKMGNMTGAYRGSSLSVMNMVTG YFVNEYEGQEVDCSYARQLTRQNFTQSCCNYLTNDTWKGCYKSINVANAVIKYVDGVEMDGQAQYKAEARFFRALNYFYL VKMFGDVPMITEPTEDATLVEYPARTAASEVYKTVIIPDLQFAVENLPDATFAGNSHRVTKYAADMLLADVYMRLGEYAN AITPLKDVINSGKFALATNDNLAEGSAFNKLRTTDDLPEVIYAREYDAAISPNGNIPVHAFNLISPTFFANSSTGNKYSL WVNVYGVSERYLNVYGEKDLRAQMNQFFHRTYTHPVDGTTLDMKMLCNWYWYDETAILETGKGTKDWNFYRYAETLLSAA EAIAQSSGVNAEAAGYLAQVKARANMEGKDVSTIASELQRLGKQAFIEECWKERLREFPLEMKIWDDCVRTGKFPQISAT NKGEVQFVDLIGATNGSGAKFKETDLYWPIPVNEIQRNPNLTQNEGYSAK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59441; Mature: 59441
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILTTAILCAGLVGFTACDSFLDEEPKSSLTLDTYYKTSADIIGNVNYLYRDGAPDKM CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCEEEEECCCCCHH GNMTGAYRGSSLSVMNMVTGYFVNEYEGQEVDCSYARQLTRQNFTQSCCNYLTNDTWKGC CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH YKSINVANAVIKYVDGVEMDGQAQYKAEARFFRALNYFYLVKMFGDVPMITEPTEDATLV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE EYPARTAASEVYKTVIIPDLQFAVENLPDATFAGNSHRVTKYAADMLLADVYMRLGEYAN ECCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AITPLKDVINSGKFALATNDNLAEGSAFNKLRTTDDLPEVIYAREYDAAISPNGNIPVHA HHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHCCCCEECCCCCCCEEE FNLISPTFFANSSTGNKYSLWVNVYGVSERYLNVYGEKDLRAQMNQFFHRTYTHPVDGTT EECCCCEEECCCCCCCEEEEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCE LDMKMLCNWYWYDETAILETGKGTKDWNFYRYAETLLSAAEAIAQSSGVNAEAAGYLAQV EEHHHHEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KARANMEGKDVSTIASELQRLGKQAFIEECWKERLREFPLEMKIWDDCVRTGKFPQISAT HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCC NKGEVQFVDLIGATNGSGAKFKETDLYWPIPVNEIQRNPNLTQNEGYSAK CCCCEEEEEEEECCCCCCCCEECCCCEECCCHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKKILTTAILCAGLVGFTACDSFLDEEPKSSLTLDTYYKTSADIIGNVNYLYRDGAPDKM CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHCCCEEEEECCCCCHH GNMTGAYRGSSLSVMNMVTGYFVNEYEGQEVDCSYARQLTRQNFTQSCCNYLTNDTWKGC CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH YKSINVANAVIKYVDGVEMDGQAQYKAEARFFRALNYFYLVKMFGDVPMITEPTEDATLV HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE EYPARTAASEVYKTVIIPDLQFAVENLPDATFAGNSHRVTKYAADMLLADVYMRLGEYAN ECCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH AITPLKDVINSGKFALATNDNLAEGSAFNKLRTTDDLPEVIYAREYDAAISPNGNIPVHA HHHHHHHHHCCCCEEEEECCCCCCCCHHCCCCCCCCCHHHHHHHCCCCEECCCCCCCEEE FNLISPTFFANSSTGNKYSLWVNVYGVSERYLNVYGEKDLRAQMNQFFHRTYTHPVDGTT EECCCCEEECCCCCCCEEEEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCE LDMKMLCNWYWYDETAILETGKGTKDWNFYRYAETLLSAAEAIAQSSGVNAEAAGYLAQV EEHHHHEEEEEECCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH KARANMEGKDVSTIASELQRLGKQAFIEECWKERLREFPLEMKIWDDCVRTGKFPQISAT HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEECCC NKGEVQFVDLIGATNGSGAKFKETDLYWPIPVNEIQRNPNLTQNEGYSAK CCCCEEEEEEEECCCCCCCCEECCCCEECCCHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA