| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is nudF [H]
Identifier: 150005761
GI number: 150005761
Start: 4083920
End: 4084474
Strand: Direct
Name: nudF [H]
Synonym: BVU_3254
Alternate gene names: 150005761
Gene position: 4083920-4084474 (Clockwise)
Preceding gene: 150005757
Following gene: 150005767
Centisome position: 79.1
GC content: 40.36
Gene sequence:
>555_bases ATGAGCACAGACGATAGAAAATGGGAGATTATTGAAAGTGAATATCTTATCCGCCGCCCTTGGCTGACCGCACGCCGTGA CCGGGTTAAACTACCTACAGGAGTTGAAATTCCTGAATATTATATTTTGGAATATCCTGATTGGGTAAATGTAATTGCTA TCACCAAAGAGGGTAAATTCGTATTAGTACGCCAATACCGTCACGGAATAAAAGAAACACGTTATGAAATTTGCGCCGGA GTTTGTGAAACCGGAGAAGAACCTTTGCTTTCTGCCCAACGCGAATTGTACGAAGAAACAGGGTATGGCAATGGAAATTG GACAAAACTTATGACTATTTCAGCAAATGCCAGCACCATGACAAATATCACTCATTGTTATCTGGCTACGGAGGTAGAAC GAATCTCTACCCAGCATTTGGAAGAAACTGAAGATCTGACAGTGCATTTGCTGGATGAAGAAGAAGTAAAAGCGTTGTTA TTGAATGATGAGGTGAAACAATCATTGATGGCTGCACCGTTTTGGAAGTATTTTGCTTTATATTCTCGTTTATAA
Upstream 100 bases:
>100_bases TTAATGCAAATGGATTAATGTACCTTTGCCGGTATAATCAATTAAGCCACTGGCAAGAATAAATTTTATAATGTAGAATA TAAAACAAAAAACTTATTAT
Downstream 100 bases:
>100_bases TAAAGACTTTTAGGGAGACTGAAAAAGCTCCCTAAAAGTAAGTTGAATCATTTATTCTATTAAACCGAGTTAATCACTTT TTATACTTCTTTGTATCGTC
Product: putative Nudix/MutT family protein
Products: NA
Alternate protein names: ADP-ribose diphosphatase; ADP-ribose phosphohydrolase; ASPPase; Adenosine diphosphoribose pyrophosphatase; ADPR-PPase [H]
Number of amino acids: Translated: 184; Mature: 183
Protein sequence:
>184_residues MSTDDRKWEIIESEYLIRRPWLTARRDRVKLPTGVEIPEYYILEYPDWVNVIAITKEGKFVLVRQYRHGIKETRYEICAG VCETGEEPLLSAQRELYEETGYGNGNWTKLMTISANASTMTNITHCYLATEVERISTQHLEETEDLTVHLLDEEEVKALL LNDEVKQSLMAAPFWKYFALYSRL
Sequences:
>Translated_184_residues MSTDDRKWEIIESEYLIRRPWLTARRDRVKLPTGVEIPEYYILEYPDWVNVIAITKEGKFVLVRQYRHGIKETRYEICAG VCETGEEPLLSAQRELYEETGYGNGNWTKLMTISANASTMTNITHCYLATEVERISTQHLEETEDLTVHLLDEEEVKALL LNDEVKQSLMAAPFWKYFALYSRL >Mature_183_residues STDDRKWEIIESEYLIRRPWLTARRDRVKLPTGVEIPEYYILEYPDWVNVIAITKEGKFVLVRQYRHGIKETRYEICAGV CETGEEPLLSAQRELYEETGYGNGNWTKLMTISANASTMTNITHCYLATEVERISTQHLEETEDLTVHLLDEEEVKALLL NDEVKQSLMAAPFWKYFALYSRL
Specific function: Acts on ADP-mannose and ADP-glucose as well as ADP- ribose. Prevents glycogen biosynthesis. The reaction catalyzed by this enzyme is a limiting step of the gluconeogenic process [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004385 - InterPro: IPR020476 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 [H]
Pfam domain/function: PF00293 NUDIX [H]
EC number: =3.6.1.13 [H]
Molecular weight: Translated: 21545; Mature: 21414
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDDRKWEIIESEYLIRRPWLTARRDRVKLPTGVEIPEYYILEYPDWVNVIAITKEGKF CCCCCCCEEEECCCHHEECCCCCCCCCCEECCCCCCCCCEEEEECCCCEEEEEEECCCCE VLVRQYRHGIKETRYEICAGVCETGEEPLLSAQRELYEETGYGNGNWTKLMTISANASTM EEEHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHH TNITHCYLATEVERISTQHLEETEDLTVHLLDEEEVKALLLNDEVKQSLMAAPFWKYFAL HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCHHHHHHHHHCHHHHHHHH YSRL HHCC >Mature Secondary Structure STDDRKWEIIESEYLIRRPWLTARRDRVKLPTGVEIPEYYILEYPDWVNVIAITKEGKF CCCCCCEEEECCCHHEECCCCCCCCCCEECCCCCCCCCEEEEECCCCEEEEEEECCCCE VLVRQYRHGIKETRYEICAGVCETGEEPLLSAQRELYEETGYGNGNWTKLMTISANASTM EEEHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHH TNITHCYLATEVERISTQHLEETEDLTVHLLDEEEVKALLLNDEVKQSLMAAPFWKYFAL HHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHCHHHHHHHHHCHHHHHHHH YSRL HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 10542272 [H]