| Definition | Bacteroides vulgatus ATCC 8482 chromosome, complete genome. |
|---|---|
| Accession | NC_009614 |
| Length | 5,163,189 |
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The map label for this gene is yhiD [H]
Identifier: 150005757
GI number: 150005757
Start: 4079425
End: 4080087
Strand: Direct
Name: yhiD [H]
Synonym: BVU_3250
Alternate gene names: 150005757
Gene position: 4079425-4080087 (Clockwise)
Preceding gene: 150005756
Following gene: 150005761
Centisome position: 79.01
GC content: 42.38
Gene sequence:
>663_bases ATGACGTGGGATTTTATTTTAAGATTGTTTGTGGCAGGCGCTTTGGGTACTGTTATTGGTCTGGATAGGGAATATCGTGC CAAAGAAGCCGGTTACCGTACCCATTTTCTAGTATCACTGGGAAGTGCTCTCATTATGATTGTGTCACAATATGGTTTTA TGGAAGTAGTGAAGATGGAGGGAATAGACCTGGACCCGAGTCGTGTGGCCGCACAGGTTGTCAGCGGTATCGGTTTTATT GGAGCGGGTACTATTATTTTTCAGAAACAAATCGTGCGCGGGCTTACTACCGCTGCCGGAATTTGGGCTACTTCGGGCAT CGGTCTGGCTATTGGAGCCGGTATGTACTGGCTGGGAATCTCAGCAACAATCCTTACGCTGATTGGTCTTGAGGCACTTA GCTATCTTTTTAAAAGTATAGGTATGAAAAGTTCCATGGTGGAGTTCTCTACAGACAATAAAGAAACACTGAACCGTATG GCCAAGAAATTCAATTCCAAGGAGTACAATATTGTTTCCTATCAATTGGACGAAAAGAGGTTGGGAGAAGTAACGACCTA TTATGTTACAATGGTTATAAAATCCAAGAAATACAATGATGAAGGTATGTTACTGACATTATTACAGGATTTTAGCGATA TTACCGTTCATAGGCTGGAGTAA
Upstream 100 bases:
>100_bases TAGAAGCCCTTCCGGCAGAAGACAGCCAACGAATGTTGAGTTTGCCCGAACTGACAGATGATGAGGACGATGAATAAACA AGGAGGACTTAAAGATGAGC
Downstream 100 bases:
>100_bases GCTTTTCCGGCTTGGTTCAAAAGCAGCAGGGGAGAGCGCTTATTGAAAGATTCTCTCCCCTGTGCTGTGATCATGCTTTT AACCGCATAACAAACGTACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MTWDFILRLFVAGALGTVIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFMEVVKMEGIDLDPSRVAAQVVSGIGFI GAGTIIFQKQIVRGLTTAAGIWATSGIGLAIGAGMYWLGISATILTLIGLEALSYLFKSIGMKSSMVEFSTDNKETLNRM AKKFNSKEYNIVSYQLDEKRLGEVTTYYVTMVIKSKKYNDEGMLLTLLQDFSDITVHRLE
Sequences:
>Translated_220_residues MTWDFILRLFVAGALGTVIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFMEVVKMEGIDLDPSRVAAQVVSGIGFI GAGTIIFQKQIVRGLTTAAGIWATSGIGLAIGAGMYWLGISATILTLIGLEALSYLFKSIGMKSSMVEFSTDNKETLNRM AKKFNSKEYNIVSYQLDEKRLGEVTTYYVTMVIKSKKYNDEGMLLTLLQDFSDITVHRLE >Mature_219_residues TWDFILRLFVAGALGTVIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFMEVVKMEGIDLDPSRVAAQVVSGIGFIG AGTIIFQKQIVRGLTTAAGIWATSGIGLAIGAGMYWLGISATILTLIGLEALSYLFKSIGMKSSMVEFSTDNKETLNRMA KKFNSKEYNIVSYQLDEKRLGEVTTYYVTMVIKSKKYNDEGMLLTLLQDFSDITVHRLE
Specific function: Unknown
COG id: COG1285
COG function: function code S; Uncharacterized membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MgtC/SapB family [H]
Homologues:
Organism=Escherichia coli, GI1789924, Length=182, Percent_Identity=45.0549450549451, Blast_Score=153, Evalue=7e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003416 [H]
Pfam domain/function: PF02308 MgtC [H]
EC number: NA
Molecular weight: Translated: 24329; Mature: 24198
Theoretical pI: Translated: 8.68; Mature: 8.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTWDFILRLFVAGALGTVIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFMEVVKME CCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHC GIDLDPSRVAAQVVSGIGFIGAGTIIFQKQIVRGLTTAAGIWATSGIGLAIGAGMYWLGI CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SATILTLIGLEALSYLFKSIGMKSSMVEFSTDNKETLNRMAKKFNSKEYNIVSYQLDEKR HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECHHH LGEVTTYYVTMVIKSKKYNDEGMLLTLLQDFSDITVHRLE HHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCEEEECC >Mature Secondary Structure TWDFILRLFVAGALGTVIGLDREYRAKEAGYRTHFLVSLGSALIMIVSQYGFMEVVKME CHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHC GIDLDPSRVAAQVVSGIGFIGAGTIIFQKQIVRGLTTAAGIWATSGIGLAIGAGMYWLGI CCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH SATILTLIGLEALSYLFKSIGMKSSMVEFSTDNKETLNRMAKKFNSKEYNIVSYQLDEKR HHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEEEECHHH LGEVTTYYVTMVIKSKKYNDEGMLLTLLQDFSDITVHRLE HHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]