| Definition | Mycobacterium tuberculosis H37Ra, complete genome. |
|---|---|
| Accession | NC_009525 |
| Length | 4,419,977 |
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The map label for this gene is 148660254
Identifier: 148660254
GI number: 148660254
Start: 578097
End: 578648
Strand: Direct
Name: 148660254
Synonym: MRA_0494
Alternate gene names: NA
Gene position: 578097-578648 (Clockwise)
Preceding gene: 148660253
Following gene: 148660255
Centisome position: 13.08
GC content: 62.86
Gene sequence:
>552_bases GTGACTTCCTCCTTGCCGACCGTGCAACGTGTGATCCAGAATGCGCTCGAGGTCAGCCAGCTGAAGTACTCCCAACACCC CCGCCCGGGCGGGGCGCCGCCCGCGCTGATCGTCGAGCTGCCGGGCGAACGCAAGCTCAAGATCAACACCATCCTGAGCG TCGGCGAGCATTCGGTGCGTGTCGAGGCGTTCGTGTGTCGCAAGCCTGACGAGAACCGCGAAGACGTATACCGGTTCCTG CTGCGGCGCAACCGCCGCCTGTATGGGGTCGCGTACACGCTGGACAATGTCGGCGACATCTACCTGGTGGGCCAGATGGC GCTGTCCGCAGTGGACGCCGACGAGGTTGACCGGGTGTTGGGGCAGGTGTTAGAGGTGGTGGATTCGGACTTCAATGCGT TGTTGGAGTTGGGATTTCGGTCGTCGATTCAACGAGAGTGGCAGTGGCGGTTATCTCGCGGTGAGTCGCTGCAGAACCTG CAGGCCTTCGCTCACTTACGCCCGACGACGATGCAGAGCGCGCAGCGCGATGAGAAGGAGTTGGGCGGTTAG
Upstream 100 bases:
>100_bases AGTACAACGCCGAGCGCCAGCGCCGGGGCGGCGAGGTGATATCGGACCTGGTAGCGGTGGGCAAGCCCCGCCACTGGACG CCGCGTCGCGGGGTGGGCGC
Downstream 100 bases:
>100_bases GTCGAGCCCGACGACGATGCAGAGCGCGCAGCGCGATGAGAAGGAGTTGGGCGGTTAGGTCGAGCCCGACGACGATGCAG AGCGCGCAGCGCGATGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MTSSLPTVQRVIQNALEVSQLKYSQHPRPGGAPPALIVELPGERKLKINTILSVGEHSVRVEAFVCRKPDENREDVYRFL LRRNRRLYGVAYTLDNVGDIYLVGQMALSAVDADEVDRVLGQVLEVVDSDFNALLELGFRSSIQREWQWRLSRGESLQNL QAFAHLRPTTMQSAQRDEKELGG
Sequences:
>Translated_183_residues MTSSLPTVQRVIQNALEVSQLKYSQHPRPGGAPPALIVELPGERKLKINTILSVGEHSVRVEAFVCRKPDENREDVYRFL LRRNRRLYGVAYTLDNVGDIYLVGQMALSAVDADEVDRVLGQVLEVVDSDFNALLELGFRSSIQREWQWRLSRGESLQNL QAFAHLRPTTMQSAQRDEKELGG >Mature_182_residues TSSLPTVQRVIQNALEVSQLKYSQHPRPGGAPPALIVELPGERKLKINTILSVGEHSVRVEAFVCRKPDENREDVYRFLL RRNRRLYGVAYTLDNVGDIYLVGQMALSAVDADEVDRVLGQVLEVVDSDFNALLELGFRSSIQREWQWRLSRGESLQNLQ AFAHLRPTTMQSAQRDEKELGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.leprae ML2442
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y487_MYCTU (P64709)
Other databases:
- EMBL: BX842573 - EMBL: AE000516 - PIR: B70744 - RefSeq: NP_215001.1 - RefSeq: NP_334914.1 - EnsemblBacteria: EBMYCT00000002412 - EnsemblBacteria: EBMYCT00000072700 - GeneID: 887162 - GeneID: 923862 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0505 - KEGG: mtu:Rv0487 - TIGR: MT0505 - TubercuList: Rv0487 - GeneTree: EBGT00050000016204 - HOGENOM: HBG484901 - OMA: HRWLLER - ProtClustDB: CLSK871812 - InterPro: IPR019706
Pfam domain/function: PF10770 DUF2596
EC number: NA
Molecular weight: Translated: 20717; Mature: 20586
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSSLPTVQRVIQNALEVSQLKYSQHPRPGGAPPALIVELPGERKLKINTILSVGEHSVR CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHCCCCCEE VEAFVCRKPDENREDVYRFLLRRNRRLYGVAYTLDNVGDIYLVGQMALSAVDADEVDRVL EEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEHHHHHHHHCCHHHHHHHH GQVLEVVDSDFNALLELGFRSSIQREWQWRLSRGESLQNLQAFAHLRPTTMQSAQRDEKE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH LGG CCC >Mature Secondary Structure TSSLPTVQRVIQNALEVSQLKYSQHPRPGGAPPALIVELPGERKLKINTILSVGEHSVR CCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEEHHHHHHCCCCCEE VEAFVCRKPDENREDVYRFLLRRNRRLYGVAYTLDNVGDIYLVGQMALSAVDADEVDRVL EEEEEECCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCCEEEHHHHHHHHCCHHHHHHHH GQVLEVVDSDFNALLELGFRSSIQREWQWRLSRGESLQNLQAFAHLRPTTMQSAQRDEKE HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHH LGG CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036