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The map label for this gene is yddR [H]

Identifier: 148652533

GI number: 148652533

Start: 863452

End: 864366

Strand: Direct

Name: yddR [H]

Synonym: PsycPRwf_0722

Alternate gene names: 148652533

Gene position: 863452-864366 (Clockwise)

Preceding gene: 148652532

Following gene: 148652535

Centisome position: 28.98

GC content: 45.57

Gene sequence:

>915_bases
ATGAATATAGCGAAATCGCTCACCAGTACCACGCTGTTAAGTGGCGTGATGTTGTTAACCGCATGTACCACCTTTGCCAC
TCCAGCGGCTAATCCTAACGCTGACAAACAGACGGCGACTAATACGGTGGAATTTCAGCAAATCCGTAATGCCACGATCA
AGCTCGATTATGCTGGCACCACGTTTTTAGTCGATCCGATGCTCGCGGCTAAAAACGCTTATCCAGGGTTTGCAGATACG
TTAAATAGCCAAATACGCTATCCAATGGTAGATTTGCCGGTATCTGTTGCAGAGGTACTAAAGGCTGACGCCATTATTTT
AACCCATCTACATGCGGATCATTGGGACGATGCTGCACGCAACCTGGTCCCTCGTAATATGCCAATTTTTACCCAAAATG
AAGCTGATGCGGCAACCGTGCGTAAAGATGGCTTTACCGATGTCAGAGTGTTGACAGAGCAAGGCGTTGTGTTTAAAGGC
ACTAGAATAAATAAAACCATAGGACAGCATGGCACTGATGAGATGTACAAAGTTCCAGCGCTTGCTCAGGCACTTGGTAA
AACGATGGGTATTGTGTTCCAAAAGCCAAACTACAAGACCGTCTATGTGGTAGGGGATACCATTTGGAATAAAGAAGTAG
AGAATGCGCTGACTCGCTACAAGCCTGATGCGGTCATCCTTAATACAGGCTATGCAAAGCTGTCTACCTTTGTCGATGAC
TCTATTATTATGGGTAAAGACGATGTATACCGTGCGTATCAATTCTCACCTAATGCTCAGATAATTAATGTGCACATGGA
TACGGTCAATCATGGCGCACTGTCGAAGGCAGAGCTGCGCCGTTTTATCGAGCAAAAACATCTGGATAAACAACGTACGC
TTGTCCCTGATGATGGTCAGTACTACAAGTTCTAG

Upstream 100 bases:

>100_bases
CAAACCTGGATTGCACGTTAATACTGAGTGTTTAACCAAACCCTCATTAAGTCGTAAAACAGACTCATCAACAAGAATCT
CATTAACAAGGTATCAAATT

Downstream 100 bases:

>100_bases
TTTTTTATGGATTTGTTTTTAGAATCACTTTTGTCTAGTCGTACTTTTTGAGTATTGCTAGACATGATAAATATGGCACA
ACTGAGACAGCTTATGAATA

Product: beta-lactamase fold-like Zn-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MNIAKSLTSTTLLSGVMLLTACTTFATPAANPNADKQTATNTVEFQQIRNATIKLDYAGTTFLVDPMLAAKNAYPGFADT
LNSQIRYPMVDLPVSVAEVLKADAIILTHLHADHWDDAARNLVPRNMPIFTQNEADAATVRKDGFTDVRVLTEQGVVFKG
TRINKTIGQHGTDEMYKVPALAQALGKTMGIVFQKPNYKTVYVVGDTIWNKEVENALTRYKPDAVILNTGYAKLSTFVDD
SIIMGKDDVYRAYQFSPNAQIINVHMDTVNHGALSKAELRRFIEQKHLDKQRTLVPDDGQYYKF

Sequences:

>Translated_304_residues
MNIAKSLTSTTLLSGVMLLTACTTFATPAANPNADKQTATNTVEFQQIRNATIKLDYAGTTFLVDPMLAAKNAYPGFADT
LNSQIRYPMVDLPVSVAEVLKADAIILTHLHADHWDDAARNLVPRNMPIFTQNEADAATVRKDGFTDVRVLTEQGVVFKG
TRINKTIGQHGTDEMYKVPALAQALGKTMGIVFQKPNYKTVYVVGDTIWNKEVENALTRYKPDAVILNTGYAKLSTFVDD
SIIMGKDDVYRAYQFSPNAQIINVHMDTVNHGALSKAELRRFIEQKHLDKQRTLVPDDGQYYKF
>Mature_304_residues
MNIAKSLTSTTLLSGVMLLTACTTFATPAANPNADKQTATNTVEFQQIRNATIKLDYAGTTFLVDPMLAAKNAYPGFADT
LNSQIRYPMVDLPVSVAEVLKADAIILTHLHADHWDDAARNLVPRNMPIFTQNEADAATVRKDGFTDVRVLTEQGVVFKG
TRINKTIGQHGTDEMYKVPALAQALGKTMGIVFQKPNYKTVYVVGDTIWNKEVENALTRYKPDAVILNTGYAKLSTFVDD
SIIMGKDDVYRAYQFSPNAQIINVHMDTVNHGALSKAELRRFIEQKHLDKQRTLVPDDGQYYKF

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 33781; Mature: 33781

Theoretical pI: Translated: 7.77; Mature: 7.77

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIAKSLTSTTLLSGVMLLTACTTFATPAANPNADKQTATNTVEFQQIRNATIKLDYAGT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHCCCEEEEEECCC
TFLVDPMLAAKNAYPGFADTLNSQIRYPMVDLPVSVAEVLKADAIILTHLHADHWDDAAR
EEEECCHHHHCCCCCCHHHHHCCCCCCCEECCCHHHHHHHCCCEEEEEEECCCCHHHHHH
NLVPRNMPIFTQNEADAATVRKDGFTDVRVLTEQGVVFKGTRINKTIGQHGTDEMYKVPA
HCCCCCCCEEECCCCCHHHHHCCCCCEEEEEECCCEEEECCCCCHHHCCCCCCHHHHHHH
LAQALGKTMGIVFQKPNYKTVYVVGDTIWNKEVENALTRYKPDAVILNTGYAKLSTFVDD
HHHHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCC
SIIMGKDDVYRAYQFSPNAQIINVHMDTVNHGALSKAELRRFIEQKHLDKQRTLVPDDGQ
CEEECCCHHEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCC
YYKF
EECC
>Mature Secondary Structure
MNIAKSLTSTTLLSGVMLLTACTTFATPAANPNADKQTATNTVEFQQIRNATIKLDYAGT
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHCCCEEEEEECCC
TFLVDPMLAAKNAYPGFADTLNSQIRYPMVDLPVSVAEVLKADAIILTHLHADHWDDAAR
EEEECCHHHHCCCCCCHHHHHCCCCCCCEECCCHHHHHHHCCCEEEEEEECCCCHHHHHH
NLVPRNMPIFTQNEADAATVRKDGFTDVRVLTEQGVVFKGTRINKTIGQHGTDEMYKVPA
HCCCCCCCEEECCCCCHHHHHCCCCCEEEEEECCCEEEECCCCCHHHCCCCCCHHHHHHH
LAQALGKTMGIVFQKPNYKTVYVVGDTIWNKEVENALTRYKPDAVILNTGYAKLSTFVDD
HHHHHHHHHEEEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHCC
SIIMGKDDVYRAYQFSPNAQIINVHMDTVNHGALSKAELRRFIEQKHLDKQRTLVPDDGQ
CEEECCCHHEEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCHHCCCCCCCCC
YYKF
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]