Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652535
Identifier: 148652535
GI number: 148652535
Start: 866779
End: 866994
Strand: Direct
Name: 148652535
Synonym: PsycPRwf_0725
Alternate gene names: NA
Gene position: 866779-866994 (Clockwise)
Preceding gene: 148652533
Following gene: 148652536
Centisome position: 29.1
GC content: 42.59
Gene sequence:
>216_bases ATGTCACATACCTACCTAACAACCCAAGAGCTTTCTGAACGCATCAAGTACACCCCTCGAACGATTCGTAATGAACTGAA AGACAGTGTCTTGATTGAAGGTATCCACTACATAAGACCTTTTGGTGGTAGAAAAATCCTTTATGTTTGGGAGGAGATTG AAAAAGATATGCGTGTCGGAGTGTCCGGCAGCATCAACGCCATGGCATTACAATAA
Upstream 100 bases:
>100_bases TAGTTGTAAAAAGTACTTGCATAGTTGTAAAAATGTGCTAAATTACAACTATGGTATTTAAAAGTACCATCATAATTAAA CTTTATATAAGGAATGTATT
Downstream 100 bases:
>100_bases GGAGGCTATTATGGCTAGCATTAGAAGTAGGGGAAAAAAGCTGTTTGTTGACTTTCGATACTTAGGAGTCCGCTGTCGCG AAACAACAAATTTGATTGAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 71; Mature: 70
Protein sequence:
>71_residues MSHTYLTTQELSERIKYTPRTIRNELKDSVLIEGIHYIRPFGGRKILYVWEEIEKDMRVGVSGSINAMALQ
Sequences:
>Translated_71_residues MSHTYLTTQELSERIKYTPRTIRNELKDSVLIEGIHYIRPFGGRKILYVWEEIEKDMRVGVSGSINAMALQ >Mature_70_residues SHTYLTTQELSERIKYTPRTIRNELKDSVLIEGIHYIRPFGGRKILYVWEEIEKDMRVGVSGSINAMALQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8284; Mature: 8153
Theoretical pI: Translated: 8.94; Mature: 8.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSHTYLTTQELSERIKYTPRTIRNELKDSVLIEGIHYIRPFGGRKILYVWEEIEKDMRVG CCCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCC VSGSINAMALQ CCCCCEEEEEC >Mature Secondary Structure SHTYLTTQELSERIKYTPRTIRNELKDSVLIEGIHYIRPFGGRKILYVWEEIEKDMRVG CCCEECHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHCC VSGSINAMALQ CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA