Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652520
Identifier: 148652520
GI number: 148652520
Start: 849605
End: 850243
Strand: Direct
Name: 148652520
Synonym: PsycPRwf_0709
Alternate gene names: NA
Gene position: 849605-850243 (Clockwise)
Preceding gene: 148652519
Following gene: 148652521
Centisome position: 28.52
GC content: 45.85
Gene sequence:
>639_bases ATGAGACATTACACACATGTGCTTTCTAATGGACATAGCTGGTTATCCGGTCGTGTCCTTTTATTGGTGGTGACATCGTC ACTCTCGTTAACGCTAGCCGCTTGCAGCCAATCTAATACCAGTGGCTCTGATTCTCAACCAGTAAAGGTTGAACAGTCTG CTACCCAGAATGCACAAGTACAAAATGAAAGTTCTGCTCCTACAAATGCTCCCGTTAACAGCTCGTCATCATTACTCAAA AACGTCTCAGCCACGGTTTATAAAGATGCCAACTGCGGCTGCTGTAAAGAATGGGTAGGCTATGCAAAAAACAATGGATT AAGTGCAACCACGCACGATGTGGAAGATCTATCCTTATTTAAGGAGCGTTATGGCGTACCACAGCAAATGCGCTCTTGTC ATACCACCGTTACCACCGACGGTTTTGTCTTTGAAGGGCATGTCCCTGCTAAACACATGGCTGAATTCTTAGCAAATCCT CCTGCACAAGCTATTGGACTTGCCGTACCGAGTATGCCGGTTGGTAGCCCCGGTATGGAGTATGAAGGTAAATTCATGCC TTATAAGGTAATGCAGCTTAATAAAGACGGCACCACAGAAGTCTATGCTGCTATTGAGTCTCCTCAGCAGCAGCTGTAG
Upstream 100 bases:
>100_bases TGCTGCATTTAATGTTTTTAGTTAAGTACATAAGAATTCAAATATAGGGTGTAAGTTTTTAGAATAGCGAGCATAACAAT AGACGTTTAGGAGTAATTTA
Downstream 100 bases:
>100_bases TGTTGGCTTAGATGTGAATAGATTCTGTTAAATATCGAAAATGTTATAACTATAAGCTTAACCACCATCTCTCAAATTAA ATCAGGTTATCATTATGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 212; Mature: 212
Protein sequence:
>212_residues MRHYTHVLSNGHSWLSGRVLLLVVTSSLSLTLAACSQSNTSGSDSQPVKVEQSATQNAQVQNESSAPTNAPVNSSSSLLK NVSATVYKDANCGCCKEWVGYAKNNGLSATTHDVEDLSLFKERYGVPQQMRSCHTTVTTDGFVFEGHVPAKHMAEFLANP PAQAIGLAVPSMPVGSPGMEYEGKFMPYKVMQLNKDGTTEVYAAIESPQQQL
Sequences:
>Translated_212_residues MRHYTHVLSNGHSWLSGRVLLLVVTSSLSLTLAACSQSNTSGSDSQPVKVEQSATQNAQVQNESSAPTNAPVNSSSSLLK NVSATVYKDANCGCCKEWVGYAKNNGLSATTHDVEDLSLFKERYGVPQQMRSCHTTVTTDGFVFEGHVPAKHMAEFLANP PAQAIGLAVPSMPVGSPGMEYEGKFMPYKVMQLNKDGTTEVYAAIESPQQQL >Mature_212_residues MRHYTHVLSNGHSWLSGRVLLLVVTSSLSLTLAACSQSNTSGSDSQPVKVEQSATQNAQVQNESSAPTNAPVNSSSSLLK NVSATVYKDANCGCCKEWVGYAKNNGLSATTHDVEDLSLFKERYGVPQQMRSCHTTVTTDGFVFEGHVPAKHMAEFLANP PAQAIGLAVPSMPVGSPGMEYEGKFMPYKVMQLNKDGTTEVYAAIESPQQQL
Specific function: Unknown
COG id: COG3019
COG function: function code R; Predicted metal-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22785; Mature: 22785
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRHYTHVLSNGHSWLSGRVLLLVVTSSLSLTLAACSQSNTSGSDSQPVKVEQSATQNAQV CCHHHHHHHCCCCHHCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCC QNESSAPTNAPVNSSSSLLKNVSATVYKDANCGCCKEWVGYAKNNGLSATTHDVEDLSLF CCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH KERYGVPQQMRSCHTTVTTDGFVFEGHVPAKHMAEFLANPPAQAIGLAVPSMPVGSPGME HHHCCCHHHHHHHCCEEECCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCCCCCCCCC YEGKFMPYKVMQLNKDGTTEVYAAIESPQQQL CCCCCCCEEEEEECCCCCEEEEEEECCHHHCC >Mature Secondary Structure MRHYTHVLSNGHSWLSGRVLLLVVTSSLSLTLAACSQSNTSGSDSQPVKVEQSATQNAQV CCHHHHHHHCCCCHHCCCEEEEEEECCCEEEEEECCCCCCCCCCCCCEEECCCCCCCCCC QNESSAPTNAPVNSSSSLLKNVSATVYKDANCGCCKEWVGYAKNNGLSATTHDVEDLSLF CCCCCCCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHH KERYGVPQQMRSCHTTVTTDGFVFEGHVPAKHMAEFLANPPAQAIGLAVPSMPVGSPGME HHHCCCHHHHHHHCCEEECCCEEEECCCCHHHHHHHHCCCCHHHHEEECCCCCCCCCCCC YEGKFMPYKVMQLNKDGTTEVYAAIESPQQQL CCCCCCCEEEEEECCCCCEEEEEEECCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA