Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148652519
Identifier: 148652519
GI number: 148652519
Start: 848846
End: 849439
Strand: Direct
Name: 148652519
Synonym: PsycPRwf_0708
Alternate gene names: NA
Gene position: 848846-849439 (Clockwise)
Preceding gene: 148652518
Following gene: 148652520
Centisome position: 28.49
GC content: 44.95
Gene sequence:
>594_bases ATGAAATTTTTATTGGGTGCGCTCTTTACCGTATTTGTGGCAATCGTTGGCGTGTTTGCGGTTGTTACTAGTGGCGTTGT CAATGTGGGAGCTGACCAAGAGCATAGCCCAATGATGTTTAGCTTTTTAGAAACTGCTCGCAATCGTTCCATAGAAAATG CCAGTAAAGATATTGTGGTACCAGATTTAGAGAAGGCTGAGCTAATCAGTTCTGGTGGCGCGGACTATAAGGATATGTGT GCAGGCTGTCACTTGTCTCCGGGAGTGGCACAAACTGACTTTAGTGAGGGCTTATATCCAAAGCCGCCCAACTTTACCAA GGCTGATATTGTCAAACGTTATCAAACAGAAGACGGTGCAAAGCAAAGCTTTTGGGCAATCAAGCACGGTATTATGGCAT CTGGAATGCCTGCGTGGGGCGCGTCCCATGATGACGCTAGAATGTGGGCAATGGTTGCTTTTATCAGATCGTTACCTGAA TTAGATGAAGCTCAGTACACGATGCTAACCACTAGGATAGATGGCGATATGATGGACATGTCATTTGATGGTGATATGAA TATGTCGGATGATGGATCTGGAATGCAGCATTAA
Upstream 100 bases:
>100_bases TACCAAAAACACTGCGTTACTAACGACAGTAAATCTTAAAAATTTTAGCTCTGTTAAATAGCAGTCAACACTTAACGGAA ATAAATTGTTAGGAAAACAT
Downstream 100 bases:
>100_bases TACTTTCTAGATATGAAAGCCTCCTAACTCACGGTTGTCGCTATCACCAATGTAGTACTGAACAGTGCTGCATTTAATGT TTTTAGTTAAGTACATAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome C Class I Protein; Cytochrome C Class I; Cytochrome C; Class I Triheme Cytochrome C; Di-Heme Cytochrome C
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MKFLLGALFTVFVAIVGVFAVVTSGVVNVGADQEHSPMMFSFLETARNRSIENASKDIVVPDLEKAELISSGGADYKDMC AGCHLSPGVAQTDFSEGLYPKPPNFTKADIVKRYQTEDGAKQSFWAIKHGIMASGMPAWGASHDDARMWAMVAFIRSLPE LDEAQYTMLTTRIDGDMMDMSFDGDMNMSDDGSGMQH
Sequences:
>Translated_197_residues MKFLLGALFTVFVAIVGVFAVVTSGVVNVGADQEHSPMMFSFLETARNRSIENASKDIVVPDLEKAELISSGGADYKDMC AGCHLSPGVAQTDFSEGLYPKPPNFTKADIVKRYQTEDGAKQSFWAIKHGIMASGMPAWGASHDDARMWAMVAFIRSLPE LDEAQYTMLTTRIDGDMMDMSFDGDMNMSDDGSGMQH >Mature_197_residues MKFLLGALFTVFVAIVGVFAVVTSGVVNVGADQEHSPMMFSFLETARNRSIENASKDIVVPDLEKAELISSGGADYKDMC AGCHLSPGVAQTDFSEGLYPKPPNFTKADIVKRYQTEDGAKQSFWAIKHGIMASGMPAWGASHDDARMWAMVAFIRSLPE LDEAQYTMLTTRIDGDMMDMSFDGDMNMSDDGSGMQH
Specific function: Unknown
COG id: COG2863
COG function: function code C; Cytochrome c553
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21495; Mature: 21495
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: PS51007 CYTC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 7.6 %Met (Translated Protein) 8.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 7.6 %Met (Mature Protein) 8.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFLLGALFTVFVAIVGVFAVVTSGVVNVGADQEHSPMMFSFLETARNRSIENASKDIVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PDLEKAELISSGGADYKDMCAGCHLSPGVAQTDFSEGLYPKPPNFTKADIVKRYQTEDGA CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC KQSFWAIKHGIMASGMPAWGASHDDARMWAMVAFIRSLPELDEAQYTMLTTRIDGDMMDM HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE SFDGDMNMSDDGSGMQH ECCCCCCCCCCCCCCCC >Mature Secondary Structure MKFLLGALFTVFVAIVGVFAVVTSGVVNVGADQEHSPMMFSFLETARNRSIENASKDIVV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCC PDLEKAELISSGGADYKDMCAGCHLSPGVAQTDFSEGLYPKPPNFTKADIVKRYQTEDGA CCCHHHHHHHCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCC KQSFWAIKHGIMASGMPAWGASHDDARMWAMVAFIRSLPELDEAQYTMLTTRIDGDMMDM HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEEE SFDGDMNMSDDGSGMQH ECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA