Click here to switch to the map view.

The map label for this gene is cmoB

Identifier: 148652103

GI number: 148652103

Start: 345273

End: 346334

Strand: Direct

Name: cmoB

Synonym: PsycPRwf_0291

Alternate gene names: 148652103

Gene position: 345273-346334 (Clockwise)

Preceding gene: 148652102

Following gene: 148652104

Centisome position: 11.59

GC content: 47.65

Gene sequence:

>1062_bases
ATGACAAACCACACAATCACTACCGCTGAACGAGAACTGTACTTAGCCCTTATTCAACGTGCTCAGTATCGCCCTATTGC
TACCCAGTGGTTGGCAAACTTACCCCAATGGCTCAGTGACGTTAAAGACAAACGCCGCTATGCTCACGCGCCAGCTTACC
TATCTGCGGTAGAAAACTTGCCACAAATCAAGGTCAAAAACGTCGATTTGAACAGCGATATTCTAACCATTGATGCCGAT
TTGACTGACGGTCAAAGCAAGCAAATAACCGCGCTTATGAAACAGTTAATGCCATGGCGCAAAGGCCCGTTTCAGATTGG
ATCTGGCGACAATAAAGTGTTTATCGACACCGAATGGCACAGTGATTGGAAATGGAATCGCATAAAGCCTCATTTAGGTA
CTTTACAAGGCCGTTATGTGCTTGATGTCGGTGGTGGCTCAGGCTATCACGGCTGGCGCATGGCAGGGGCAGGGGCTAAG
CAAGTGGTTATCATTGACCCCTCTTGCCTTTTTTATCATCAGTTTATGGCCATTCGTCACTTTGTGGCAGGCTTCGATAC
TGATATGGACAGTGATAGAACAGGCGTCGGCTACCGCACTCACTATATTCCTGTTGGCTTAGAGCAGTTACCCTCAAGCT
CAGATCAAGGCAATCAATTGTTTGATACCGTATTTTGTATGGGGGTGCTATATCACCGTCAATCACCGTTTGAGCATTTG
ATTCAACTCAAAAACCAGCTGATAAATGGTGGGCAATTGGTGTTAGAAACCCTAGTTATCGAAGGCGATGCCAATACCGT
ACTGGTGCCGCACAACCGCTATGCCAAAATGAATAATGTCTACTTTATTCCCTCGGTGGCGGCACTGACGGGCTGGCTGG
AGAAAGTGGGCTTTAGCGAGGTCAAATGCGTTGATATTGATATTACCTCGATCAAGGAGCAGCGCGCCACAGACTGGATG
AGCTATCAATCGCTCAAAGACTTTTTGGATCCCAATGACCCCACCAAAACGGTTGAAGGGTATCCGGCGCCCATGCGAGC
AACACTAATCGCCACTAAGTAG

Upstream 100 bases:

>100_bases
GCATTTAAATAGCCCAAATTTTAAATAAGGCCGCTTGTAAACAGGATGATGGGTGTTCTCTGATCCTCTCAATAAATTGT
ATTCACATAACGAATCCTCT

Downstream 100 bases:

>100_bases
CCCGCCCCACTTATTTGGCAATTCATTTAAAGGGCTTATTGCAACTGCATGTACCGTGCTACAGTTAACATATAAATCAA
TGCTCGTCGACATCTCTTGT

Product: putative methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTNHTITTAERELYLALIQRAQYRPIATQWLANLPQWLSDVKDKRRYAHAPAYLSAVENLPQIKVKNVDLNSDILTIDAD
LTDGQSKQITALMKQLMPWRKGPFQIGSGDNKVFIDTEWHSDWKWNRIKPHLGTLQGRYVLDVGGGSGYHGWRMAGAGAK
QVVIIDPSCLFYHQFMAIRHFVAGFDTDMDSDRTGVGYRTHYIPVGLEQLPSSSDQGNQLFDTVFCMGVLYHRQSPFEHL
IQLKNQLINGGQLVLETLVIEGDANTVLVPHNRYAKMNNVYFIPSVAALTGWLEKVGFSEVKCVDIDITSIKEQRATDWM
SYQSLKDFLDPNDPTKTVEGYPAPMRATLIATK

Sequences:

>Translated_353_residues
MTNHTITTAERELYLALIQRAQYRPIATQWLANLPQWLSDVKDKRRYAHAPAYLSAVENLPQIKVKNVDLNSDILTIDAD
LTDGQSKQITALMKQLMPWRKGPFQIGSGDNKVFIDTEWHSDWKWNRIKPHLGTLQGRYVLDVGGGSGYHGWRMAGAGAK
QVVIIDPSCLFYHQFMAIRHFVAGFDTDMDSDRTGVGYRTHYIPVGLEQLPSSSDQGNQLFDTVFCMGVLYHRQSPFEHL
IQLKNQLINGGQLVLETLVIEGDANTVLVPHNRYAKMNNVYFIPSVAALTGWLEKVGFSEVKCVDIDITSIKEQRATDWM
SYQSLKDFLDPNDPTKTVEGYPAPMRATLIATK
>Mature_352_residues
TNHTITTAERELYLALIQRAQYRPIATQWLANLPQWLSDVKDKRRYAHAPAYLSAVENLPQIKVKNVDLNSDILTIDADL
TDGQSKQITALMKQLMPWRKGPFQIGSGDNKVFIDTEWHSDWKWNRIKPHLGTLQGRYVLDVGGGSGYHGWRMAGAGAKQ
VVIIDPSCLFYHQFMAIRHFVAGFDTDMDSDRTGVGYRTHYIPVGLEQLPSSSDQGNQLFDTVFCMGVLYHRQSPFEHLI
QLKNQLINGGQLVLETLVIEGDANTVLVPHNRYAKMNNVYFIPSVAALTGWLEKVGFSEVKCVDIDITSIKEQRATDWMS
YQSLKDFLDPNDPTKTVEGYPAPMRATLIATK

Specific function: Catalyzes the conversion of 5-hydroxyuridine (ho5U) to 5-methoxyuridine (mo5U) at position 34 in tRNA

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. CmoB family

Homologues:

Organism=Escherichia coli, GI1788178, Length=327, Percent_Identity=52.9051987767584, Blast_Score=336, Evalue=1e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CMOB_PSYWF (A5WC55)

Other databases:

- EMBL:   CP000713
- RefSeq:   YP_001279196.1
- ProteinModelPortal:   A5WC55
- STRING:   A5WC55
- GeneID:   5205044
- GenomeReviews:   CP000713_GR
- KEGG:   prw:PsycPRwf_0291
- eggNOG:   COG0500
- HOGENOM:   HBG296882
- OMA:   DVIFCLG
- ProtClustDB:   PRK15068
- BioCyc:   PSP56811:PSYCPRWF_0291-MONOMER
- HAMAP:   MF_01590
- InterPro:   IPR010017
- TIGRFAMs:   TIGR00452

Pfam domain/function: PF08003 Methyltransf_9

EC number: NA

Molecular weight: Translated: 39917; Mature: 39786

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNHTITTAERELYLALIQRAQYRPIATQWLANLPQWLSDVKDKRRYAHAPAYLSAVENL
CCCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PQIKVKNVDLNSDILTIDADLTDGQSKQITALMKQLMPWRKGPFQIGSGDNKVFIDTEWH
CCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCC
SDWKWNRIKPHLGTLQGRYVLDVGGGSGYHGWRMAGAGAKQVVIIDPSCLFYHQFMAIRH
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHH
FVAGFDTDMDSDRTGVGYRTHYIPVGLEQLPSSSDQGNQLFDTVFCMGVLYHRQSPFEHL
HHHCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
IQLKNQLINGGQLVLETLVIEGDANTVLVPHNRYAKMNNVYFIPSVAALTGWLEKVGFSE
HHHHHHHCCCHHEEEEEEEEECCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCC
VKCVDIDITSIKEQRATDWMSYQSLKDFLDPNDPTKTVEGYPAPMRATLIATK
EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure 
TNHTITTAERELYLALIQRAQYRPIATQWLANLPQWLSDVKDKRRYAHAPAYLSAVENL
CCCEEEHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCC
PQIKVKNVDLNSDILTIDADLTDGQSKQITALMKQLMPWRKGPFQIGSGDNKVFIDTEWH
CCEEEEEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCC
SDWKWNRIKPHLGTLQGRYVLDVGGGSGYHGWRMAGAGAKQVVIIDPSCLFYHQFMAIRH
CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEECCCCCEEEEECCHHHHHHHHHHHHH
FVAGFDTDMDSDRTGVGYRTHYIPVGLEQLPSSSDQGNQLFDTVFCMGVLYHRQSPFEHL
HHHCCCCCCCCCCCCCCEEEEEEECCHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHH
IQLKNQLINGGQLVLETLVIEGDANTVLVPHNRYAKMNNVYFIPSVAALTGWLEKVGFSE
HHHHHHHCCCHHEEEEEEEEECCCCEEEECCCCCCCCCCEEECCHHHHHHHHHHHCCCCC
VKCVDIDITSIKEQRATDWMSYQSLKDFLDPNDPTKTVEGYPAPMRATLIATK
EEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA