Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is yceG [C]
Identifier: 148651942
GI number: 148651942
Start: 147359
End: 148540
Strand: Direct
Name: yceG [C]
Synonym: PsycPRwf_0125
Alternate gene names: 148651942
Gene position: 147359-148540 (Clockwise)
Preceding gene: 148651940
Following gene: 148651943
Centisome position: 4.95
GC content: 49.24
Gene sequence:
>1182_bases ATGAGCGATTCTAATTCAAAAAATCCCAGCAATACCCCGCACAATCCATCAGATGTTGACCAAAATGAAGCACCTCACAC TGACGTCTCCTTAGTCTGTGATGACCCTTCTCGTCATAAAAAGCCGCCGCAAAAACCCACATCCAATCGCAGCTATCAGC TGCTGCTGGTACTGGGATTAATGGCTGCTTTTGTGGTGGCTATGGCTTATCAGACCCTGTTTGGTCACTCTGATCGACCC GCCGGCGACTTAGTGGTGGAAGAGGGTCAAAGTTACTATGGCTTCTTACCACAGTTTCAGCGCGATGTGCCCATGTTCTC AGCCAGCTTGGCCAAGCTTTATATCAAGTCGGCCGTCGATACGCCACTAAAAGCAGGCACCTATGAAGTGCCTGCCAATG CCAGCTTAAAGCAGCTTATTGATGCTTTTAAACAAGGCGAGAAAGTGGACATGGTGGCCATCCAGATTATCGAGGGCAAG ACTGCCGCTGATTTATATAAAGTGATTGCAAACACGCCGGGTGTCACCTTAGAGGTACTACAAAAAGACGGCAAGCCCAA ACCCAATTTGAAGCAGCTGCTGGGTATCGATGCTGTCACCCCAGAGGGAGAGTTTGCTGATAATCTAGAGGGCTGGTTTA CCCCAGACACCTATCACTATGCCAAAGGGGTGACCGACAAGCAGATCTTGACCGATTTGTACCAGCGTCAACAAAAAGCG CTGGATGAGGCGTGGGCGAGCCGCTCTAAAGGTCTGCCGTATAAGTCGCCTTATGAAGCCTTAATTATGGCCTCAATCAT CGAAAAAGAGACCAGTGTCGATAGTGAGCGTGAATTGGTGTCTGCGGTGTTTGTAAACCGTTTGAATAAGCCGATGCGCC TACAGACGGATCCTACCATTATTTATGGTATGGGTGAGCGTTATGAGGGCAACATCCGCCGTGCTGATATCAATGAAAAG ACCGCTTATAACACCTATCAAATCGACGGCTTACCACCCACGCCTATTGCGCTACCCTCACCGGCATCTATTGACGCTGC GCTACATCCAGCTGACAGTGATGTGTTGTACTTTGTGGCGACGGGTACCGGCGGTCATAAGTTTACCAAGACTTATGCGG AGCACAACCAAGCGGTAAAAGAGTATTTGGCGGTGATGCGCCAACAAAAAAGCGGTCAATAA
Upstream 100 bases:
>100_bases TGCCATAAATATAAGCCAGATACGCTTAGATGACTAATCCCCATTGAATATCCGAGCATACAGTGCTAAATTCTAGCAAA CTTTTACCTCGTGAGTGGCT
Downstream 100 bases:
>100_bases GTAGATGTAGGCGAACAACAAGTACGCCTATTATATGTGGGAAAAACACCCTGATATTAACAAGGGTGATACTGGCAACA ACGAGGTAATCGACATTGAG
Product: aminodeoxychorismate lyase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 393; Mature: 392
Protein sequence:
>393_residues MSDSNSKNPSNTPHNPSDVDQNEAPHTDVSLVCDDPSRHKKPPQKPTSNRSYQLLLVLGLMAAFVVAMAYQTLFGHSDRP AGDLVVEEGQSYYGFLPQFQRDVPMFSASLAKLYIKSAVDTPLKAGTYEVPANASLKQLIDAFKQGEKVDMVAIQIIEGK TAADLYKVIANTPGVTLEVLQKDGKPKPNLKQLLGIDAVTPEGEFADNLEGWFTPDTYHYAKGVTDKQILTDLYQRQQKA LDEAWASRSKGLPYKSPYEALIMASIIEKETSVDSERELVSAVFVNRLNKPMRLQTDPTIIYGMGERYEGNIRRADINEK TAYNTYQIDGLPPTPIALPSPASIDAALHPADSDVLYFVATGTGGHKFTKTYAEHNQAVKEYLAVMRQQKSGQ
Sequences:
>Translated_393_residues MSDSNSKNPSNTPHNPSDVDQNEAPHTDVSLVCDDPSRHKKPPQKPTSNRSYQLLLVLGLMAAFVVAMAYQTLFGHSDRP AGDLVVEEGQSYYGFLPQFQRDVPMFSASLAKLYIKSAVDTPLKAGTYEVPANASLKQLIDAFKQGEKVDMVAIQIIEGK TAADLYKVIANTPGVTLEVLQKDGKPKPNLKQLLGIDAVTPEGEFADNLEGWFTPDTYHYAKGVTDKQILTDLYQRQQKA LDEAWASRSKGLPYKSPYEALIMASIIEKETSVDSERELVSAVFVNRLNKPMRLQTDPTIIYGMGERYEGNIRRADINEK TAYNTYQIDGLPPTPIALPSPASIDAALHPADSDVLYFVATGTGGHKFTKTYAEHNQAVKEYLAVMRQQKSGQ >Mature_392_residues SDSNSKNPSNTPHNPSDVDQNEAPHTDVSLVCDDPSRHKKPPQKPTSNRSYQLLLVLGLMAAFVVAMAYQTLFGHSDRPA GDLVVEEGQSYYGFLPQFQRDVPMFSASLAKLYIKSAVDTPLKAGTYEVPANASLKQLIDAFKQGEKVDMVAIQIIEGKT AADLYKVIANTPGVTLEVLQKDGKPKPNLKQLLGIDAVTPEGEFADNLEGWFTPDTYHYAKGVTDKQILTDLYQRQQKAL DEAWASRSKGLPYKSPYEALIMASIIEKETSVDSERELVSAVFVNRLNKPMRLQTDPTIIYGMGERYEGNIRRADINEKT AYNTYQIDGLPPTPIALPSPASIDAALHPADSDVLYFVATGTGGHKFTKTYAEHNQAVKEYLAVMRQQKSGQ
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=269, Percent_Identity=42.7509293680297, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 43387; Mature: 43256
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSNSKNPSNTPHNPSDVDQNEAPHTDVSLVCDDPSRHKKPPQKPTSNRSYQLLLVLGL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHH MAAFVVAMAYQTLFGHSDRPAGDLVVEEGQSYYGFLPQFQRDVPMFSASLAKLYIKSAVD HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHC TPLKAGTYEVPANASLKQLIDAFKQGEKVDMVAIQIIEGKTAADLYKVIANTPGVTLEVL CCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEE QKDGKPKPNLKQLLGIDAVTPEGEFADNLEGWFTPDTYHYAKGVTDKQILTDLYQRQQKA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH LDEAWASRSKGLPYKSPYEALIMASIIEKETSVDSERELVSAVFVNRLNKPMRLQTDPTI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCEE IYGMGERYEGNIRRADINEKTAYNTYQIDGLPPTPIALPSPASIDAALHPADSDVLYFVA EEECCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEE TGTGGHKFTKTYAEHNQAVKEYLAVMRQQKSGQ ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDSNSKNPSNTPHNPSDVDQNEAPHTDVSLVCDDPSRHKKPPQKPTSNRSYQLLLVLGL CCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHCCCCCCCCCCCCCHHHHHHHHH MAAFVVAMAYQTLFGHSDRPAGDLVVEEGQSYYGFLPQFQRDVPMFSASLAKLYIKSAVD HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCHHCCCCHHHHCCCHHHHHHHHHHHHHHHC TPLKAGTYEVPANASLKQLIDAFKQGEKVDMVAIQIIEGKTAADLYKVIANTPGVTLEVL CCCCCCCEECCCCCHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHHCCCCCEEEEE QKDGKPKPNLKQLLGIDAVTPEGEFADNLEGWFTPDTYHYAKGVTDKQILTDLYQRQQKA CCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHH LDEAWASRSKGLPYKSPYEALIMASIIEKETSVDSERELVSAVFVNRLNKPMRLQTDPTI HHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEEECCCCEE IYGMGERYEGNIRRADINEKTAYNTYQIDGLPPTPIALPSPASIDAALHPADSDVLYFVA EEECCCCCCCCEEECCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCEECCCCCCEEEEEE TGTGGHKFTKTYAEHNQAVKEYLAVMRQQKSGQ ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]