Definition | Psychrobacter sp. PRwf-1 chromosome, complete genome. |
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Accession | NC_009524 |
Length | 2,978,976 |
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The map label for this gene is 148651940
Identifier: 148651940
GI number: 148651940
Start: 145859
End: 146422
Strand: Direct
Name: 148651940
Synonym: PsycPRwf_0123
Alternate gene names: NA
Gene position: 145859-146422 (Clockwise)
Preceding gene: 148651938
Following gene: 148651942
Centisome position: 4.9
GC content: 38.83
Gene sequence:
>564_bases ATGCGTTCTATTTATGAAGATACTCGAATTCCAGTACAAATGCGTCGAATGATGGTGTTTGATGAGATTTGTAAGAAAGC GAAATTAAATCCTAATAATATGGTTCATTTATCTAGGTTTACCCAATTAGCATTTGGCGTTATCTACATAAAAAACCTTA AGAAATACATGGCTTATGGCGGTGTTTTTGAATATGCACACACTCGAGAGGAGGTAATAGAGCAAGGTATTAGCGTTATT CCTGTGAATGATTATGTCATGTGTGCCTTGACTGTGAATTTAGAACCTTTTACCCAACCTGTCGCTACGCCCTTGCAGCT TTTATGGCAGTGGAACAAGTATGTTAAAAATAGGCTGCATTGCTATATCGATTATCAAGATGAGTGCTTGTTCCTGATTA ATGATGAAGTAGACGATGAGTATGCGCCGCACCAGTTTCATGAAAGACTGGTTGCCACGGCACACTTGCCAATGTGGGAT GACAGGGAGGAATTAATCTCTAATATACATAGCACAGTAGAAAAAAGACGTCTGCGTCCAAGCTGCTATGACAATATAAT TTAG
Upstream 100 bases:
>100_bases TATTAAATCATTGATATTGATCGTCTTTTGTTACATCGTATTGTGATTTCGCCTTTTTTGATCAATGATCAAACCTCATT TAAATAAAAAGGTGTTTTTG
Downstream 100 bases:
>100_bases TTCATAAAGCGTGAGTCAAATACTGGGTAGCTTCACCTACCAGTGCCAAGTCAGCCTATTTTGCGATACCGCCCATTTCC TAAAAATTGCAGCAGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 187
Protein sequence:
>187_residues MRSIYEDTRIPVQMRRMMVFDEICKKAKLNPNNMVHLSRFTQLAFGVIYIKNLKKYMAYGGVFEYAHTREEVIEQGISVI PVNDYVMCALTVNLEPFTQPVATPLQLLWQWNKYVKNRLHCYIDYQDECLFLINDEVDDEYAPHQFHERLVATAHLPMWD DREELISNIHSTVEKRRLRPSCYDNII
Sequences:
>Translated_187_residues MRSIYEDTRIPVQMRRMMVFDEICKKAKLNPNNMVHLSRFTQLAFGVIYIKNLKKYMAYGGVFEYAHTREEVIEQGISVI PVNDYVMCALTVNLEPFTQPVATPLQLLWQWNKYVKNRLHCYIDYQDECLFLINDEVDDEYAPHQFHERLVATAHLPMWD DREELISNIHSTVEKRRLRPSCYDNII >Mature_187_residues MRSIYEDTRIPVQMRRMMVFDEICKKAKLNPNNMVHLSRFTQLAFGVIYIKNLKKYMAYGGVFEYAHTREEVIEQGISVI PVNDYVMCALTVNLEPFTQPVATPLQLLWQWNKYVKNRLHCYIDYQDECLFLINDEVDDEYAPHQFHERLVATAHLPMWD DREELISNIHSTVEKRRLRPSCYDNII
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22264; Mature: 22264
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSIYEDTRIPVQMRRMMVFDEICKKAKLNPNNMVHLSRFTQLAFGVIYIKNLKKYMAYG CCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC GVFEYAHTREEVIEQGISVIPVNDYVMCALTVNLEPFTQPVATPLQLLWQWNKYVKNRLH CHHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEE CYIDYQDECLFLINDEVDDEYAPHQFHERLVATAHLPMWDDREELISNIHSTVEKRRLRP EEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC SCYDNII HHHCCCC >Mature Secondary Structure MRSIYEDTRIPVQMRRMMVFDEICKKAKLNPNNMVHLSRFTQLAFGVIYIKNLKKYMAYG CCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHC GVFEYAHTREEVIEQGISVIPVNDYVMCALTVNLEPFTQPVATPLQLLWQWNKYVKNRLH CHHHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCEE CYIDYQDECLFLINDEVDDEYAPHQFHERLVATAHLPMWDDREELISNIHSTVEKRRLRP EEEEECCCEEEEECCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCC SCYDNII HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA