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The map label for this gene is oppB [H]

Identifier: 148651839

GI number: 148651839

Start: 32839

End: 33759

Strand: Direct

Name: oppB [H]

Synonym: PsycPRwf_0022

Alternate gene names: 148651839

Gene position: 32839-33759 (Clockwise)

Preceding gene: 148651838

Following gene: 148651840

Centisome position: 1.1

GC content: 46.69

Gene sequence:

>921_bases
ATGTTAAAGCTTATATTTCGGCGGCTATTAGAAGCCATTCCCACCATGTTTATCCTTATTACCGTGTCATTTTTTATGAT
GCGATTGGCGCCGGGTAGTCCGTTTAGTGGCGAGCGTAGCTTTTCACCCGCGGTAATGGCCAATATTGAAGCCAAATATC
ACTTAAATGACCCCATGTGGCTGCAATATGTGCATTATTTAAAGCAAATTGCAGTGGGCGACTTTGGCCCCTCCTTTAAG
TACAAAGACTACACCGTCAATGAGCTGTTATCACAAGCGCTACCGGTTTCGGTGGAGCTGGGCCTTTATGCCTTTATCTT
AGCCTTAGTGCTCGGACTGATCTTCGGTATTGTCGCCGCTTTAAAACAAAACTCATGGATTGACTATATCGTTATGGCTT
TTGCCAATATCGGGGTGGTTATTCCAAGCTTTGTCAAAGCGCCCCTGTTGGTACTTATTTTTGCCATTACTTTAAAGTGG
CTGCCCGGTGGCGGCTGGAATGATGGGGCGGTACAAAACCTTATCTTGCCGGTGACGGCACTGGCTTTGGCTTATACTGC
CAGCATCGCGCGTATCATGCGCGGCTCTATGATTGAGGTGATGAACAGCCAGTATATCCGTACCGCACGTGCCAAAGGCT
TGCCGATGCAGCGTATTGTATTTAAGCATGCACTGCGCCCAGCGATGCTGCCGGTTATCTCATATTTAGGCCCTGCTTTT
GTGGGTATTATCACCGGCTCAATTGTGATTGAGACCATTTTTGGTCTGCCCGGTATCGGTCAATTATTCGTTAATGGCGC
CTTAAACCGTGACTATGGCATGGTGCTTAGCTTAACCATTTTGGTGGGCGTATTGACCATTGCCTTTAACGCCATTGTCG
ATATTTTATACGCAGTTATTGACCCACAGATTAAGTACTAG

Upstream 100 bases:

>100_bases
GTAAAGCACACCCATAGCAGATAAAGAATAAGCACCAAACACGGATATTAATTATCGATTTTAACAACGGAATCAATGCG
TTACTGATAACAGAGGGTTT

Downstream 100 bases:

>100_bases
GCCGTTAAGTAGGCTCGCCAAAGCATCAATGAAATGCCCATTGCCCTAACGCCTACTTACCCCATTCACCTGCAAAAGAT
TAAGTAACAAGGATGACTAT

Product: alkaline phosphatase

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MLKLIFRRLLEAIPTMFILITVSFFMMRLAPGSPFSGERSFSPAVMANIEAKYHLNDPMWLQYVHYLKQIAVGDFGPSFK
YKDYTVNELLSQALPVSVELGLYAFILALVLGLIFGIVAALKQNSWIDYIVMAFANIGVVIPSFVKAPLLVLIFAITLKW
LPGGGWNDGAVQNLILPVTALALAYTASIARIMRGSMIEVMNSQYIRTARAKGLPMQRIVFKHALRPAMLPVISYLGPAF
VGIITGSIVIETIFGLPGIGQLFVNGALNRDYGMVLSLTILVGVLTIAFNAIVDILYAVIDPQIKY

Sequences:

>Translated_306_residues
MLKLIFRRLLEAIPTMFILITVSFFMMRLAPGSPFSGERSFSPAVMANIEAKYHLNDPMWLQYVHYLKQIAVGDFGPSFK
YKDYTVNELLSQALPVSVELGLYAFILALVLGLIFGIVAALKQNSWIDYIVMAFANIGVVIPSFVKAPLLVLIFAITLKW
LPGGGWNDGAVQNLILPVTALALAYTASIARIMRGSMIEVMNSQYIRTARAKGLPMQRIVFKHALRPAMLPVISYLGPAF
VGIITGSIVIETIFGLPGIGQLFVNGALNRDYGMVLSLTILVGVLTIAFNAIVDILYAVIDPQIKY
>Mature_306_residues
MLKLIFRRLLEAIPTMFILITVSFFMMRLAPGSPFSGERSFSPAVMANIEAKYHLNDPMWLQYVHYLKQIAVGDFGPSFK
YKDYTVNELLSQALPVSVELGLYAFILALVLGLIFGIVAALKQNSWIDYIVMAFANIGVVIPSFVKAPLLVLIFAITLKW
LPGGGWNDGAVQNLILPVTALALAYTASIARIMRGSMIEVMNSQYIRTARAKGLPMQRIVFKHALRPAMLPVISYLGPAF
VGIITGSIVIETIFGLPGIGQLFVNGALNRDYGMVLSLTILVGVLTIAFNAIVDILYAVIDPQIKY

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787497, Length=306, Percent_Identity=74.1830065359477, Blast_Score=468, Evalue=1e-133,
Organism=Escherichia coli, GI1787053, Length=309, Percent_Identity=35.2750809061489, Blast_Score=194, Evalue=8e-51,
Organism=Escherichia coli, GI1789965, Length=338, Percent_Identity=34.3195266272189, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1789888, Length=310, Percent_Identity=33.8709677419355, Blast_Score=169, Evalue=2e-43,
Organism=Escherichia coli, GI1788504, Length=356, Percent_Identity=28.3707865168539, Blast_Score=140, Evalue=1e-34,
Organism=Escherichia coli, GI1787550, Length=273, Percent_Identity=31.5018315018315, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787761, Length=316, Percent_Identity=32.2784810126582, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33663; Mature: 33663

Theoretical pI: Translated: 9.88; Mature: 9.88

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKLIFRRLLEAIPTMFILITVSFFMMRLAPGSPFSGERSFSPAVMANIEAKYHLNDPMW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEECCCHHH
LQYVHYLKQIAVGDFGPSFKYKDYTVNELLSQALPVSVELGLYAFILALVLGLIFGIVAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKQNSWIDYIVMAFANIGVVIPSFVKAPLLVLIFAITLKWLPGGGWNDGAVQNLILPVTA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LALAYTASIARIMRGSMIEVMNSQYIRTARAKGLPMQRIVFKHALRPAMLPVISYLGPAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGIITGSIVIETIFGLPGIGQLFVNGALNRDYGMVLSLTILVGVLTIAFNAIVDILYAVI
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPQIKY
CCCCCC
>Mature Secondary Structure
MLKLIFRRLLEAIPTMFILITVSFFMMRLAPGSPFSGERSFSPAVMANIEAKYHLNDPMW
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCEEEECCCHHH
LQYVHYLKQIAVGDFGPSFKYKDYTVNELLSQALPVSVELGLYAFILALVLGLIFGIVAA
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
LKQNSWIDYIVMAFANIGVVIPSFVKAPLLVLIFAITLKWLPGGGWNDGAVQNLILPVTA
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
LALAYTASIARIMRGSMIEVMNSQYIRTARAKGLPMQRIVFKHALRPAMLPVISYLGPAF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
VGIITGSIVIETIFGLPGIGQLFVNGALNRDYGMVLSLTILVGVLTIAFNAIVDILYAVI
HHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DPQIKY
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]