Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550753
Identifier: 148550753
GI number: 148550753
Start: 214522
End: 215295
Strand: Reverse
Name: 148550753
Synonym: Swit_5317
Alternate gene names: NA
Gene position: 215295-214522 (Counterclockwise)
Preceding gene: 148550754
Following gene: 148550752
Centisome position: 69.4
GC content: 64.73
Gene sequence:
>774_bases ATGGCTAAAGGCGCCAAGTCCGGGCCGACAGGCTCTCGGCCCGCCAAGGCTCCGACGCGGAAGAGGACGCTTGCTGCCCT TCCCGCCTCCCCTTTAGCCCCCTCCGCTCCGGCGAGTGCCGCTCCTTCGCGCACTATTGCCACGCCGCCAGATAATCTTG ATGCCCTCGTCAAGCGGACGAGCTGGCCTGCGGACGTGACCATCCATCGCATCCATCCCGATGAATATGCGCCGGATGCC TTCAACCCCGGTCCACACGGCAACGCGCGCTTCAGTCCGCTCCGCAATGCCGCCGGCAATGCGATCCCTACCCTCTATGG CGGCACGACGCTCGAATGCGCCGCCATGGAAACGGTCTTCCACGATGTGCCTCATGCGCCGGGACTGAAGACCATCGCGA AACGCAAGCTCAGGAAGCATCGTTATTCCAGATTGCAACCCGCCGCGGACCTCAGGCTCGCCGATCTCGGCAGCGCCGCG CTGCGCAAGCTTGGTGTTCCGCGGGTCGATCTCATCGAGAGCGACAAGGATATCTATCCGCAGACCCGCGCCTGGGCGGA GGCCATCCATGCCCAGTGTCCGGACGTGCAGGGCCTGGGCTGGGTATCGCGTCAGGATGACAGCGCGCGGGCCCTCATTC TGTTCGGCGACCGGCTGGCGCCCGATCCATTCAGCAGCGTCGAAGCGCCGGTCGACATCGTCGCCGATGCCGACACCTTC ACTGCACTCATCGAGCTCGCCGACATCATCGGGGTGAAGATCACCGGCAAATAG
Upstream 100 bases:
>100_bases ACCAATGGTTTCCTGGGCGGCGCGCTTCCCAAGGATCTCCTCGTGAGCGATCCCGGACGCGTCCTGGCAGCGGCACAAGA CGAGATTGCCGGCGTGCAGC
Downstream 100 bases:
>100_bases CCCCGCGAAGCCCGCTTCGGCGATCTAGCTCCGACCTGCTCCGCCAGGCGACCTCCCTCCCCTTCCTAAAACCCTGGCGA CCGCGCGGCTTGTACGGGAG
Product: RES
Products: NA
Alternate protein names: RES Domain Protein
Number of amino acids: Translated: 257; Mature: 256
Protein sequence:
>257_residues MAKGAKSGPTGSRPAKAPTRKRTLAALPASPLAPSAPASAAPSRTIATPPDNLDALVKRTSWPADVTIHRIHPDEYAPDA FNPGPHGNARFSPLRNAAGNAIPTLYGGTTLECAAMETVFHDVPHAPGLKTIAKRKLRKHRYSRLQPAADLRLADLGSAA LRKLGVPRVDLIESDKDIYPQTRAWAEAIHAQCPDVQGLGWVSRQDDSARALILFGDRLAPDPFSSVEAPVDIVADADTF TALIELADIIGVKITGK
Sequences:
>Translated_257_residues MAKGAKSGPTGSRPAKAPTRKRTLAALPASPLAPSAPASAAPSRTIATPPDNLDALVKRTSWPADVTIHRIHPDEYAPDA FNPGPHGNARFSPLRNAAGNAIPTLYGGTTLECAAMETVFHDVPHAPGLKTIAKRKLRKHRYSRLQPAADLRLADLGSAA LRKLGVPRVDLIESDKDIYPQTRAWAEAIHAQCPDVQGLGWVSRQDDSARALILFGDRLAPDPFSSVEAPVDIVADADTF TALIELADIIGVKITGK >Mature_256_residues AKGAKSGPTGSRPAKAPTRKRTLAALPASPLAPSAPASAAPSRTIATPPDNLDALVKRTSWPADVTIHRIHPDEYAPDAF NPGPHGNARFSPLRNAAGNAIPTLYGGTTLECAAMETVFHDVPHAPGLKTIAKRKLRKHRYSRLQPAADLRLADLGSAAL RKLGVPRVDLIESDKDIYPQTRAWAEAIHAQCPDVQGLGWVSRQDDSARALILFGDRLAPDPFSSVEAPVDIVADADTFT ALIELADIIGVKITGK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27315; Mature: 27184
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGAKSGPTGSRPAKAPTRKRTLAALPASPLAPSAPASAAPSRTIATPPDNLDALVKRT CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC SWPADVTIHRIHPDEYAPDAFNPGPHGNARFSPLRNAAGNAIPTLYGGTTLECAAMETVF CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCEEHHHHHHHHH HDVPHAPGLKTIAKRKLRKHRYSRLQPAADLRLADLGSAALRKLGVPRVDLIESDKDIYP HHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHCCHHHHHHCCCCCEEEECCCCCCCC QTRAWAEAIHAQCPDVQGLGWVSRQDDSARALILFGDRLAPDPFSSVEAPVDIVADADTF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCHHH TALIELADIIGVKITGK HHHHHHHHHHCEEEECC >Mature Secondary Structure AKGAKSGPTGSRPAKAPTRKRTLAALPASPLAPSAPASAAPSRTIATPPDNLDALVKRT CCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHC SWPADVTIHRIHPDEYAPDAFNPGPHGNARFSPLRNAAGNAIPTLYGGTTLECAAMETVF CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCEECCCCEEHHHHHHHHH HDVPHAPGLKTIAKRKLRKHRYSRLQPAADLRLADLGSAALRKLGVPRVDLIESDKDIYP HHCCCCCCHHHHHHHHHHHHHHHHCCCHHCCCHHHCCHHHHHHCCCCCEEEECCCCCCCC QTRAWAEAIHAQCPDVQGLGWVSRQDDSARALILFGDRLAPDPFSSVEAPVDIVADADTF HHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCHHH TALIELADIIGVKITGK HHHHHHHHHHCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA