Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550752
Identifier: 148550752
GI number: 148550752
Start: 213988
End: 214398
Strand: Reverse
Name: 148550752
Synonym: Swit_5316
Alternate gene names: NA
Gene position: 214398-213988 (Counterclockwise)
Preceding gene: 148550753
Following gene: 148550747
Centisome position: 69.11
GC content: 64.23
Gene sequence:
>411_bases ATGTTCGAACCGAAATCCAGAATGACCCCGCAGGCCGAAGCGGACTTCCTGATCCAGGAAATCCGCGACACGCGCACCGC CTACGACAACGCGACCGTCGACAAGTGGCGCGCCCAGCATCTTGGCATGATCGGTCTGCGCATGAGCGCGCTGGTTCGCG CCGCTCGCAAGGTGCTCGCCGCCGCCCACCCGACAACCCAGAGCGAGACCGACGCGGACCAGTGCACCATGCTGGAAGCG CGTACCAGCACCTATCTCAATTCTGCCAGCCGGCTTGCCGCGACGATGGAGCATGAGTGGCCGCGCGACATCCAGCAGGA GATCGATGCGCAGGCCGATGACCTTATCCGCGATGCAGACGCGATTTCGGCAGAGCTCGCCGCAATCGTCGCCCGATATC CCGCTCCCTGA
Upstream 100 bases:
>100_bases TCTAGCTCCGACCTGCTCCGCCAGGCGACCTCCCTCCCCTTCCTAAAACCCTGGCGACCGCGCGGCTTGTACGGGAGGCG CCAAAGCATGGAGAAAGCCT
Downstream 100 bases:
>100_bases CATTCATGCGACCCGCCATCCCGCGCGATCACCGCAGGTGGCCGGGAGCGCCATGCGGGAAGCGCGGCTTCAGTCCACGA GCAGCTTGTCGATCGTGACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLAAAHPTTQSETDADQCTMLEA RTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDADAISAELAAIVARYPAP
Sequences:
>Translated_136_residues MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLAAAHPTTQSETDADQCTMLEA RTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDADAISAELAAIVARYPAP >Mature_136_residues MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLAAAHPTTQSETDADQCTMLEA RTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDADAISAELAAIVARYPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15160; Mature: 15160
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHPTTQSETDADQCTMLEARTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDAD HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH AISAELAAIVARYPAP HHHHHHHHHHHHCCCC >Mature Secondary Structure MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLA CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHPTTQSETDADQCTMLEARTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDAD HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH AISAELAAIVARYPAP HHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA