Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550752

Identifier: 148550752

GI number: 148550752

Start: 213988

End: 214398

Strand: Reverse

Name: 148550752

Synonym: Swit_5316

Alternate gene names: NA

Gene position: 214398-213988 (Counterclockwise)

Preceding gene: 148550753

Following gene: 148550747

Centisome position: 69.11

GC content: 64.23

Gene sequence:

>411_bases
ATGTTCGAACCGAAATCCAGAATGACCCCGCAGGCCGAAGCGGACTTCCTGATCCAGGAAATCCGCGACACGCGCACCGC
CTACGACAACGCGACCGTCGACAAGTGGCGCGCCCAGCATCTTGGCATGATCGGTCTGCGCATGAGCGCGCTGGTTCGCG
CCGCTCGCAAGGTGCTCGCCGCCGCCCACCCGACAACCCAGAGCGAGACCGACGCGGACCAGTGCACCATGCTGGAAGCG
CGTACCAGCACCTATCTCAATTCTGCCAGCCGGCTTGCCGCGACGATGGAGCATGAGTGGCCGCGCGACATCCAGCAGGA
GATCGATGCGCAGGCCGATGACCTTATCCGCGATGCAGACGCGATTTCGGCAGAGCTCGCCGCAATCGTCGCCCGATATC
CCGCTCCCTGA

Upstream 100 bases:

>100_bases
TCTAGCTCCGACCTGCTCCGCCAGGCGACCTCCCTCCCCTTCCTAAAACCCTGGCGACCGCGCGGCTTGTACGGGAGGCG
CCAAAGCATGGAGAAAGCCT

Downstream 100 bases:

>100_bases
CATTCATGCGACCCGCCATCCCGCGCGATCACCGCAGGTGGCCGGGAGCGCCATGCGGGAAGCGCGGCTTCAGTCCACGA
GCAGCTTGTCGATCGTGACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLAAAHPTTQSETDADQCTMLEA
RTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDADAISAELAAIVARYPAP

Sequences:

>Translated_136_residues
MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLAAAHPTTQSETDADQCTMLEA
RTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDADAISAELAAIVARYPAP
>Mature_136_residues
MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLAAAHPTTQSETDADQCTMLEA
RTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDADAISAELAAIVARYPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15160; Mature: 15160

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHPTTQSETDADQCTMLEARTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDAD
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH
AISAELAAIVARYPAP
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MFEPKSRMTPQAEADFLIQEIRDTRTAYDNATVDKWRAQHLGMIGLRMSALVRAARKVLA
CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAHPTTQSETDADQCTMLEARTSTYLNSASRLAATMEHEWPRDIQQEIDAQADDLIRDAD
HCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHH
AISAELAAIVARYPAP
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA