Click here to switch to the map view.

The map label for this gene is yagS [H]

Identifier: 148550750

GI number: 148550750

Start: 210642

End: 211655

Strand: Direct

Name: yagS [H]

Synonym: Swit_5314

Alternate gene names: 148550750

Gene position: 210642-211655 (Clockwise)

Preceding gene: 148550749

Following gene: 148550751

Centisome position: 67.9

GC content: 67.16

Gene sequence:

>1014_bases
ATGAACCGCTTTGGCTATGCGCGGCCAACGTCGATCGCGGACGCCGTCAGCTTGGCCGCAAAGGACGGTGCGCGCTACAT
CGCGGGTGGCACGAACCTGGTCGATCTGATGAAGGAACATGTCGAACGGCCGACGAGCGTGATCGACATTACCCGGCTGC
CTCTGGGTAGGATCGAGGAGGCTGAGGATGGGGGATTGAGGCTCGGTGCGCTTGTGCCCAATGCCGACACCGCCTATGAC
CGGCGCGTCCAGGATCGTTACCCGCTCCTGTCGTCGGCGATCCTGGCGGGCGCCAGCCCCCAGCTGCGCAATGCCGCGAC
CAATGGGGGGAATCTCAACCAGCGCACGCGTTGCTACTATTTTTATGACACGGCGACCGCCTGCAACAAGCGGGTTCCAG
GCTCTGGCTGCGGCGCGATCGGTGGGGTCAACCGCATCCATGCCATTCTGGGGGCTGGCGATCAGTGCATCGCAACCCAC
CCGTCGGACATGTGCGTCGCCCTGGCCGCGCTCTCGGCCCAAGTGGAAGTGGCCGGCCCGAATGGCGTCCGCACGATCGC
GTTCGCGGACTATCATCGCCTGCCCGGCGAGGATCCCGCGCGCGACAACAGCCTCGAGCGCGGCGAGCTCGTCACGGCCA
TCATCCTTCCGCATGAGGATTTCACGCAGAACTACACCTATCTGAAGTTGCGCGACCGCTTGTCCTACGCCTTCGCGCTC
GTGTCGGTGGCGGCGGCTCTGCGTATCGAGGGCACCAGGATCGCCGAGGCGCGCCTCGCGCTTGGCGGCGTGGCGCACAA
GCCCTGGCGCCTTCCCCACGTCGAACAGTTGCTGGTCGGCCGCGAGGCGGGCGAGGCGGTCTTCCGGCAGGTCGCTGACG
CGCTGCTCGACGGTGCGGCCGGCCAGGGCGAGAACGACTTCAAGATCCCGCTTGCGCGGCGCGCGATCGTGCGGGCGCTG
TCGCAGGCCGCGGCCGGCACGCCGCAATCGCAAACCGACAAACGCGTCGCCTGA

Upstream 100 bases:

>100_bases
GCCGGGAGGAGATACGCGAGCTCATGAGCGGCAATCTTTGTCGTTGCGGCGCGTATACGAACATCGCCGACGCTATCGAG
CAGGTCTTGGGAGAGCGAGC

Downstream 100 bases:

>100_bases
GGACAGGACCATGGCAGCCATCATCGCTCACGACGGCATCGGCGCTCCGCTCAGCCGGGTCGAGGGACTTCTGAAGGTGA
CCGGCAAGGCGCGCTATGCC

Product: molybdopterin dehydrogenase, FAD-binding

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MNRFGYARPTSIADAVSLAAKDGARYIAGGTNLVDLMKEHVERPTSVIDITRLPLGRIEEAEDGGLRLGALVPNADTAYD
RRVQDRYPLLSSAILAGASPQLRNAATNGGNLNQRTRCYYFYDTATACNKRVPGSGCGAIGGVNRIHAILGAGDQCIATH
PSDMCVALAALSAQVEVAGPNGVRTIAFADYHRLPGEDPARDNSLERGELVTAIILPHEDFTQNYTYLKLRDRLSYAFAL
VSVAAALRIEGTRIAEARLALGGVAHKPWRLPHVEQLLVGREAGEAVFRQVADALLDGAAGQGENDFKIPLARRAIVRAL
SQAAAGTPQSQTDKRVA

Sequences:

>Translated_337_residues
MNRFGYARPTSIADAVSLAAKDGARYIAGGTNLVDLMKEHVERPTSVIDITRLPLGRIEEAEDGGLRLGALVPNADTAYD
RRVQDRYPLLSSAILAGASPQLRNAATNGGNLNQRTRCYYFYDTATACNKRVPGSGCGAIGGVNRIHAILGAGDQCIATH
PSDMCVALAALSAQVEVAGPNGVRTIAFADYHRLPGEDPARDNSLERGELVTAIILPHEDFTQNYTYLKLRDRLSYAFAL
VSVAAALRIEGTRIAEARLALGGVAHKPWRLPHVEQLLVGREAGEAVFRQVADALLDGAAGQGENDFKIPLARRAIVRAL
SQAAAGTPQSQTDKRVA
>Mature_337_residues
MNRFGYARPTSIADAVSLAAKDGARYIAGGTNLVDLMKEHVERPTSVIDITRLPLGRIEEAEDGGLRLGALVPNADTAYD
RRVQDRYPLLSSAILAGASPQLRNAATNGGNLNQRTRCYYFYDTATACNKRVPGSGCGAIGGVNRIHAILGAGDQCIATH
PSDMCVALAALSAQVEVAGPNGVRTIAFADYHRLPGEDPARDNSLERGELVTAIILPHEDFTQNYTYLKLRDRLSYAFAL
VSVAAALRIEGTRIAEARLALGGVAHKPWRLPHVEQLLVGREAGEAVFRQVADALLDGAAGQGENDFKIPLARRAIVRAL
SQAAAGTPQSQTDKRVA

Specific function: Unknown

COG id: COG1319

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786479, Length=327, Percent_Identity=49.2354740061162, Blast_Score=285, Evalue=4e-78,
Organism=Escherichia coli, GI1789231, Length=327, Percent_Identity=25.9938837920489, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005107
- InterPro:   IPR016169
- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR002346 [H]

Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 36006; Mature: 36006

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRFGYARPTSIADAVSLAAKDGARYIAGGTNLVDLMKEHVERPTSVIDITRLPLGRIEE
CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC
AEDGGLRLGALVPNADTAYDRRVQDRYPLLSSAILAGASPQLRNAATNGGNLNQRTRCYY
CCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEE
FYDTATACNKRVPGSGCGAIGGVNRIHAILGAGDQCIATHPSDMCVALAALSAQVEVAGP
EEECHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCEEEEECC
NGVRTIAFADYHRLPGEDPARDNSLERGELVTAIILPHEDFTQNYTYLKLRDRLSYAFAL
CCEEEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCEEEEEHHHHHHHHHHH
VSVAAALRIEGTRIAEARLALGGVAHKPWRLPHVEQLLVGREAGEAVFRQVADALLDGAA
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC
GQGENDFKIPLARRAIVRALSQAAAGTPQSQTDKRVA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNRFGYARPTSIADAVSLAAKDGARYIAGGTNLVDLMKEHVERPTSVIDITRLPLGRIEE
CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCCCC
AEDGGLRLGALVPNADTAYDRRVQDRYPLLSSAILAGASPQLRNAATNGGNLNQRTRCYY
CCCCCEEEEEECCCCCCHHHHHHHHHCCHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEE
FYDTATACNKRVPGSGCGAIGGVNRIHAILGAGDQCIATHPSDMCVALAALSAQVEVAGP
EEECHHHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHHCEEEEECC
NGVRTIAFADYHRLPGEDPARDNSLERGELVTAIILPHEDFTQNYTYLKLRDRLSYAFAL
CCEEEEEEEHHHCCCCCCCCCCCCCCCCCEEEEEEECCCHHHCCEEEEEHHHHHHHHHHH
VSVAAALRIEGTRIAEARLALGGVAHKPWRLPHVEQLLVGREAGEAVFRQVADALLDGAA
HHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHCCCC
GQGENDFKIPLARRAIVRALSQAAAGTPQSQTDKRVA
CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]