Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550682
Identifier: 148550682
GI number: 148550682
Start: 133975
End: 134934
Strand: Reverse
Name: 148550682
Synonym: Swit_5245
Alternate gene names: NA
Gene position: 134934-133975 (Counterclockwise)
Preceding gene: 148550683
Following gene: 148550681
Centisome position: 43.5
GC content: 68.02
Gene sequence:
>960_bases ATGCGTAAATGGATGCTCGTATCTGCCGCACTATGTCTGGCCGCCGCGCCTGCACTCGCCCAGGATCAGGCGGGTGCCCC GCAGGTCCGGCTTTCGAAGCCGAACAGCTATGGCCTCAAGGACAACAAGATCGCCGTCCTCTCCTATGCGATCAATTTCG TGACCGGGCAGCGCGCCTCGGCCAATGCCAGCGTCGGCACCAAGGCCCGGGCGGGCGCCACGCTGGTCGGCGTCGATGAA GCGACGATGCGCCGCCTCGCCAACGAGGCCCATGCCGATCTCAAGGCGCAGCTGACCGCCGCGGGCATTCCCATCGTCGA TGATGCCACCATAGCGGAGGTGACCCGGACCGCCGGCGTCACGCTGCTGCCGGGCAATCGCGACGCGAACCGCGACGGCG GCATGGTCATCGGATCGGGCGTCAAGAAGTCCTATGTCAGCGTCGGCGCCGACGCGGCGCCGCTCACCGATCTCTACCAG AGCGCGGGCAAGGTCGGCGGCTTCGGCATGCTCGCGACCCTGGGCAAGGGCAACAAGCTGAGCAAGCCGGCCCTGAGCCT GGGCGCGGCCTTCGTATCGCCCTCGCTTACGATCGATTTCGCCGACGCCGATGCGCGCACGAGCCGCACGCTCGCCGGTT CGCGCCGCGCCAGTGTCGATATCGACACCCAGTTCGCGATCCGCATGCCCTCGCCGGTCAACATCCAGGTCGGCCAGGCG GTGGGCATCGCCGGCCCGATCGCCATGACCCTCTCGCGCGACGTCGTCATGGATGGGGCCTTCACCGGGTCGGCAGGCGC CTCCTCCATGTCGACGGCGGGAGACTATGGCGAATGGAACCCGAACGATGCGGCCAATGTGGTCGTGGATCTGCCGCGCT GGACGGCCATGGTGCAGAGCGCGTACCGCGCCTACAATGCCGCGATCGTCGCCAATCTACTCGCCGCGCGGGGCCGCTAG
Upstream 100 bases:
>100_bases CTGAATCGATCAGTTCTGCAAAGGATCGCCCTGTTCCCGGCTTGACGGGCGGCGCTTTTCTTAGAAATTCTCTCCTGTCT TTAACAGGAGGGGACGCTTC
Downstream 100 bases:
>100_bases GCCGCGCTAGCCGCGACACGGACTCGCACGCCGGATCGGTGCGCGAGGTTGTCGCTGGCCGGCCACGCGGTCATCCCCGC CGGGGTCACCTGCGCGCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 319
Protein sequence:
>319_residues MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRASANASVGTKARAGATLVGVDE ATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGVTLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQ SAGKVGGFGMLATLGKGNKLSKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQSAYRAYNAAIVANLLAARGR
Sequences:
>Translated_319_residues MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRASANASVGTKARAGATLVGVDE ATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGVTLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQ SAGKVGGFGMLATLGKGNKLSKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQSAYRAYNAAIVANLLAARGR >Mature_319_residues MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRASANASVGTKARAGATLVGVDE ATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGVTLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQ SAGKVGGFGMLATLGKGNKLSKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQSAYRAYNAAIVANLLAARGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32683; Mature: 32683
Theoretical pI: Translated: 10.04; Mature: 10.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRAS CCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEHHHCCCCCC ANASVGTKARAGATLVGVDEATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGV CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHHHCCE TLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQSAGKVGGFGMLATLGKGNKL EEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCC SKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCEEEEECCCCCEEEECCE VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQS ECCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH AYRAYNAAIVANLLAARGR HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRKWMLVSAALCLAAAPALAQDQAGAPQVRLSKPNSYGLKDNKIAVLSYAINFVTGQRAS CCCHHHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEHHHCCCCCC ANASVGTKARAGATLVGVDEATMRRLANEAHADLKAQLTAAGIPIVDDATIAEVTRTAGV CCCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHHHCCE TLLPGNRDANRDGGMVIGSGVKKSYVSVGADAAPLTDLYQSAGKVGGFGMLATLGKGNKL EEECCCCCCCCCCCEEEECCCHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEECCCCCCC SKPALSLGAAFVSPSLTIDFADADARTSRTLAGSRRASVDIDTQFAIRMPSPVNIQVGQA CCHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCEEEECCEEEEECCCCCEEEECCE VGIAGPIAMTLSRDVVMDGAFTGSAGASSMSTAGDYGEWNPNDAANVVVDLPRWTAMVQS ECCCCHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECHHHHHHHHH AYRAYNAAIVANLLAARGR HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA