Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550681

Identifier: 148550681

GI number: 148550681

Start: 133208

End: 133666

Strand: Reverse

Name: 148550681

Synonym: Swit_5244

Alternate gene names: NA

Gene position: 133666-133208 (Counterclockwise)

Preceding gene: 148550682

Following gene: 148550680

Centisome position: 43.09

GC content: 68.41

Gene sequence:

>459_bases
ATGAACATCGGTTCCATCGCCAAGAACGCCGCCGGCCACCTCGTCGGCCGTGTGTCCACCCTGACCGTCGAGCTCACCAT
CGCGCTGCGCCCGGTCCACTCGGCCAATCCCAATGCGCCCAAGTTCGAAGTGATGGCGCTGTCGGCGGCGCGCGCCTGGG
TCCGTGTCGGCGCATTGTTCGAGCTCGCCTCGCGCGAGAGCGGCCTTATCTTCTACAACGGCAAGATCGAGGACCCGAGC
TTCGCCCAGCCGCTCTATGTCTCGCTGTTCCAGCAGCAGGACGGCTCCTACAATGTGGTCTGGTCGCGCCCCTCGCGCCG
CCGCGAACTCCCCGCCGAAATGGCGATGCCCGCCGATGACGGCCTGCCGCCGCTGCCGGGCGAAGAGGCCTCCCAGGCCG
GACAGAGCGAACCCGATGGGCTGGGCACCAGCTCGGCTCCGCCTGCCTTCGCCGACTGA

Upstream 100 bases:

>100_bases
CCTGGCGGCGCCTGCTCGGCCCAGCGGCCGAGGAGAGGAGGGGGTGAGGGACTGGCGTCCCGGACAAGGGGTTCGAGGAC
GCTTTCCAAGGAGAAGTCCC

Downstream 100 bases:

>100_bases
TCGCCACCGCTTTTTCCACCGACAGGGCTCGCCTCGCACGCCTGCGAAGCGGGCCCTGTCGTCATGCCGCCGCTCGCGCG
GCGCTGTGAAGGGGAGGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MNIGSIAKNAAGHLVGRVSTLTVELTIALRPVHSANPNAPKFEVMALSAARAWVRVGALFELASRESGLIFYNGKIEDPS
FAQPLYVSLFQQQDGSYNVVWSRPSRRRELPAEMAMPADDGLPPLPGEEASQAGQSEPDGLGTSSAPPAFAD

Sequences:

>Translated_152_residues
MNIGSIAKNAAGHLVGRVSTLTVELTIALRPVHSANPNAPKFEVMALSAARAWVRVGALFELASRESGLIFYNGKIEDPS
FAQPLYVSLFQQQDGSYNVVWSRPSRRRELPAEMAMPADDGLPPLPGEEASQAGQSEPDGLGTSSAPPAFAD
>Mature_152_residues
MNIGSIAKNAAGHLVGRVSTLTVELTIALRPVHSANPNAPKFEVMALSAARAWVRVGALFELASRESGLIFYNGKIEDPS
FAQPLYVSLFQQQDGSYNVVWSRPSRRRELPAEMAMPADDGLPPLPGEEASQAGQSEPDGLGTSSAPPAFAD

Specific function: Unknown

COG id: COG5489

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16176; Mature: 16176

Theoretical pI: Translated: 4.88; Mature: 4.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIGSIAKNAAGHLVGRVSTLTVELTIALRPVHSANPNAPKFEVMALSAARAWVRVGALF
CCCCHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHH
ELASRESGLIFYNGKIEDPSFAQPLYVSLFQQQDGSYNVVWSRPSRRRELPAEMAMPADD
HHHCCCCCEEEECCEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCCC
GLPPLPGEEASQAGQSEPDGLGTSSAPPAFAD
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNIGSIAKNAAGHLVGRVSTLTVELTIALRPVHSANPNAPKFEVMALSAARAWVRVGALF
CCCCHHHHHHHHHHEEEEEEEEEEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHHHHHH
ELASRESGLIFYNGKIEDPSFAQPLYVSLFQQQDGSYNVVWSRPSRRRELPAEMAMPADD
HHHCCCCCEEEECCEECCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHCCCCCC
GLPPLPGEEASQAGQSEPDGLGTSSAPPAFAD
CCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA