Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550683
Identifier: 148550683
GI number: 148550683
Start: 135031
End: 135390
Strand: Reverse
Name: 148550683
Synonym: Swit_5246
Alternate gene names: NA
Gene position: 135390-135031 (Counterclockwise)
Preceding gene: 148550689
Following gene: 148550682
Centisome position: 43.64
GC content: 68.06
Gene sequence:
>360_bases TTGCGCCCCGCCCAGGGTGCCCGCAGGTGCTGCGCGCCGTCGTCGGTTTCGACCGCCCGCTCCAGACCCTTTTTGCGCAG GTCTTCTCGCATACCCCCCGAGGCCGAAGATCCCGAGGCCGGGAGCGTCCGGGACGATAATGAGAAGGGGGATGAGGATG GCGAAATCCTGTTGTGGGTCGGCACCGAGCCGGGCGAACTGCTCGACCCCGAGGCCGCGATCGCGCTTGTCGCGCCCTAT GCGCTCATTCCGGATGATCTCGCCGCGCGTCTGCGCGAAGACATGGACGCCGCCGCCGGCAAGCGCGACGGCGCGCACCA GATCGAGGTCAAGCGGATCCTGTTCGGTTCGCAGCACTGA
Upstream 100 bases:
>100_bases GGGATTGAACCTGGGAAGATATGGCGGCGATGTCGCAGCGCCAACCATTCGAGCATCAGACGTCTTTGCGAGGAGGACAA GATCATGAGCCGTCACAGGC
Downstream 100 bases:
>100_bases ATCGATCAGTTCTGCAAAGGATCGCCCTGTTCCCGGCTTGACGGGCGGCGCTTTTCTTAGAAATTCTCTCCTGTCTTTAA CAGGAGGGGACGCTTCATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 119
Protein sequence:
>119_residues MRPAQGARRCCAPSSVSTARSRPFLRRSSRIPPEAEDPEAGSVRDDNEKGDEDGEILLWVGTEPGELLDPEAAIALVAPY ALIPDDLAARLREDMDAAAGKRDGAHQIEVKRILFGSQH
Sequences:
>Translated_119_residues MRPAQGARRCCAPSSVSTARSRPFLRRSSRIPPEAEDPEAGSVRDDNEKGDEDGEILLWVGTEPGELLDPEAAIALVAPY ALIPDDLAARLREDMDAAAGKRDGAHQIEVKRILFGSQH >Mature_119_residues MRPAQGARRCCAPSSVSTARSRPFLRRSSRIPPEAEDPEAGSVRDDNEKGDEDGEILLWVGTEPGELLDPEAAIALVAPY ALIPDDLAARLREDMDAAAGKRDGAHQIEVKRILFGSQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12903; Mature: 12903
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPAQGARRCCAPSSVSTARSRPFLRRSSRIPPEAEDPEAGSVRDDNEKGDEDGEILLWV CCCCCCCHHHCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GTEPGELLDPEAAIALVAPYALIPDDLAARLREDMDAAAGKRDGAHQIEVKRILFGSQH ECCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC >Mature Secondary Structure MRPAQGARRCCAPSSVSTARSRPFLRRSSRIPPEAEDPEAGSVRDDNEKGDEDGEILLWV CCCCCCCHHHCCCCCCCHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE GTEPGELLDPEAAIALVAPYALIPDDLAARLREDMDAAAGKRDGAHQIEVKRILFGSQH ECCCCCCCCCCHHHHHHCCCHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA