Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550674
Identifier: 148550674
GI number: 148550674
Start: 129454
End: 129849
Strand: Direct
Name: 148550674
Synonym: Swit_5237
Alternate gene names: NA
Gene position: 129454-129849 (Clockwise)
Preceding gene: 148550672
Following gene: 148550676
Centisome position: 41.73
GC content: 67.68
Gene sequence:
>396_bases ATGACACAACCCTTGATGCGTAGCGTTGTAACCCGCCCTTGGATCGTCGCTTTGGTCCTGGCCAGTTCCGCCTCCGGCGC GATCCCTGCCGTGGCGCAGGCGACGCCCGACCGACAGGAGGTCGAGGCGACACGGCAGCTCAACCGCGAGACGGCGCGGC GCCAGCAGATCACCCTGATGGAGGCGGAACGCCAATATCAGCGTGACATCGCGGCCTATGACCGCTCGATCCGCGCTCGC CAGCGGGCCGTGGCGATCGGGAATGCCCAATACCGGCATAAGCGGCACGCCTACGCGGCCGCCATGGCCACATGGCGGGA ACAGGTTGCCGCTTGTAAGGCGGGCAAGCGCGCGGCCTGCAGGGCGCCAACCCCCGATCCCGCCAGCTTTCTCTAG
Upstream 100 bases:
>100_bases CGGGCGGGGGGATGCGGGGCCTTACAAACCCATTGTTGCCGTCCAGGAACTGTCGGGGAGGTTGAGGTCTTCTTGCGCGA AGAAGGACAGGAGGCCGTCC
Downstream 100 bases:
>100_bases ACGCGCTAGTCTGATCAAAACCGCAGCGGCGCGGGCATGGCCAGCCATTCGGGCTGGTCGTCGGTGATCGGCATGTCCAG GCGTGACGCCTCGGCCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MTQPLMRSVVTRPWIVALVLASSASGAIPAVAQATPDRQEVEATRQLNRETARRQQITLMEAERQYQRDIAAYDRSIRAR QRAVAIGNAQYRHKRHAYAAAMATWREQVAACKAGKRAACRAPTPDPASFL
Sequences:
>Translated_131_residues MTQPLMRSVVTRPWIVALVLASSASGAIPAVAQATPDRQEVEATRQLNRETARRQQITLMEAERQYQRDIAAYDRSIRAR QRAVAIGNAQYRHKRHAYAAAMATWREQVAACKAGKRAACRAPTPDPASFL >Mature_130_residues TQPLMRSVVTRPWIVALVLASSASGAIPAVAQATPDRQEVEATRQLNRETARRQQITLMEAERQYQRDIAAYDRSIRARQ RAVAIGNAQYRHKRHAYAAAMATWREQVAACKAGKRAACRAPTPDPASFL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14588; Mature: 14457
Theoretical pI: Translated: 11.50; Mature: 11.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPLMRSVVTRPWIVALVLASSASGAIPAVAQATPDRQEVEATRQLNRETARRQQITLM CCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAERQYQRDIAAYDRSIRARQRAVAIGNAQYRHKRHAYAAAMATWREQVAACKAGKRAAC HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RAPTPDPASFL CCCCCCCCCCC >Mature Secondary Structure TQPLMRSVVTRPWIVALVLASSASGAIPAVAQATPDRQEVEATRQLNRETARRQQITLM CHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH EAERQYQRDIAAYDRSIRARQRAVAIGNAQYRHKRHAYAAAMATWREQVAACKAGKRAAC HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC RAPTPDPASFL CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA