Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550676

Identifier: 148550676

GI number: 148550676

Start: 130658

End: 131176

Strand: Direct

Name: 148550676

Synonym: Swit_5239

Alternate gene names: NA

Gene position: 130658-131176 (Clockwise)

Preceding gene: 148550674

Following gene: 148550684

Centisome position: 42.12

GC content: 66.09

Gene sequence:

>519_bases
ATGCAGGCGTGGATCGCCGCGCTCTCGACCTATTCCGCGACACGCGAGACGATCCTCCAGCATCGATTTCTCGCCGATGT
CGGCGGCGAGCTATGGCGCCGCGGCGAGTTCGATTTTTCGGTCTCGCACAGCGAGGTCGACAATAGCGGCTATGACCTCA
TCATCGAGGCGCGCGGCATAATGCGGCATGTCCAGCTCAAGGCGATGCATGGACAGGCCAGGCGGCGCAGCTTCGACATT
CAGACGCGGCTGGGCGCCAAGCCCAATGGCTGCGCCGTGCTGATCCGGCATGATGCGCGCAGCCTCGCGGTCGAGGCCTA
TCGCTGGTTCGGCGCACCGCCCGGCCAAGGCCTGCCACCTTTGGGGGAGAAGGTCACCCGCCATGCCAAGGGCGATGCGC
TCGGCCATAAGGCGGACCGGCCGGCGCTGCGCGAAGTGCCGCTCGCGCGCTTTGCGCCCGTCAGCGATATCGCTGCGCTG
GTGGATCTGATGTTCGGGCCATCGTCTGAAGCGGTCTAG

Upstream 100 bases:

>100_bases
GCCATGATCGTCTCCTTATGGTGAGAAAAGTGCAGGCCCGCTGGCCGCACGCGCAGCGCCGGACTCCTCGCCCGGCTGAA
AAAAATGGGAGGAAGATGCT

Downstream 100 bases:

>100_bases
GCCGCGTTCGCGGCCTGCGGCGCGTGCCAGCGCGCGATGATCGCCTGCATCTCGTCGCCATAGCCGAGCGCATCGATATA
GAGGGCGCCTGGATGCTCGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGIMRHVQLKAMHGQARRRSFDI
QTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPPLGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAAL
VDLMFGPSSEAV

Sequences:

>Translated_172_residues
MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGIMRHVQLKAMHGQARRRSFDI
QTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPPLGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAAL
VDLMFGPSSEAV
>Mature_172_residues
MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGIMRHVQLKAMHGQARRRSFDI
QTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPPLGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAAL
VDLMFGPSSEAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18925; Mature: 18925

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECHHH
MRHVQLKAMHGQARRRSFDIQTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPP
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCC
LGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAALVDLMFGPSSEAV
HHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECHHH
MRHVQLKAMHGQARRRSFDIQTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPP
HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCC
LGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAALVDLMFGPSSEAV
HHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA