Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is 148550676
Identifier: 148550676
GI number: 148550676
Start: 130658
End: 131176
Strand: Direct
Name: 148550676
Synonym: Swit_5239
Alternate gene names: NA
Gene position: 130658-131176 (Clockwise)
Preceding gene: 148550674
Following gene: 148550684
Centisome position: 42.12
GC content: 66.09
Gene sequence:
>519_bases ATGCAGGCGTGGATCGCCGCGCTCTCGACCTATTCCGCGACACGCGAGACGATCCTCCAGCATCGATTTCTCGCCGATGT CGGCGGCGAGCTATGGCGCCGCGGCGAGTTCGATTTTTCGGTCTCGCACAGCGAGGTCGACAATAGCGGCTATGACCTCA TCATCGAGGCGCGCGGCATAATGCGGCATGTCCAGCTCAAGGCGATGCATGGACAGGCCAGGCGGCGCAGCTTCGACATT CAGACGCGGCTGGGCGCCAAGCCCAATGGCTGCGCCGTGCTGATCCGGCATGATGCGCGCAGCCTCGCGGTCGAGGCCTA TCGCTGGTTCGGCGCACCGCCCGGCCAAGGCCTGCCACCTTTGGGGGAGAAGGTCACCCGCCATGCCAAGGGCGATGCGC TCGGCCATAAGGCGGACCGGCCGGCGCTGCGCGAAGTGCCGCTCGCGCGCTTTGCGCCCGTCAGCGATATCGCTGCGCTG GTGGATCTGATGTTCGGGCCATCGTCTGAAGCGGTCTAG
Upstream 100 bases:
>100_bases GCCATGATCGTCTCCTTATGGTGAGAAAAGTGCAGGCCCGCTGGCCGCACGCGCAGCGCCGGACTCCTCGCCCGGCTGAA AAAAATGGGAGGAAGATGCT
Downstream 100 bases:
>100_bases GCCGCGTTCGCGGCCTGCGGCGCGTGCCAGCGCGCGATGATCGCCTGCATCTCGTCGCCATAGCCGAGCGCATCGATATA GAGGGCGCCTGGATGCTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGIMRHVQLKAMHGQARRRSFDI QTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPPLGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAAL VDLMFGPSSEAV
Sequences:
>Translated_172_residues MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGIMRHVQLKAMHGQARRRSFDI QTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPPLGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAAL VDLMFGPSSEAV >Mature_172_residues MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGIMRHVQLKAMHGQARRRSFDI QTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPPLGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAAL VDLMFGPSSEAV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18925; Mature: 18925
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECHHH MRHVQLKAMHGQARRRSFDIQTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPP HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCC LGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAALVDLMFGPSSEAV HHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQAWIAALSTYSATRETILQHRFLADVGGELWRRGEFDFSVSHSEVDNSGYDLIIEARGI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEECHHH MRHVQLKAMHGQARRRSFDIQTRLGAKPNGCAVLIRHDARSLAVEAYRWFGAPPGQGLPP HHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCC LGEKVTRHAKGDALGHKADRPALREVPLARFAPVSDIAALVDLMFGPSSEAV HHHHHHHHCCCCCCCCCCCCCHHHHCCHHHCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA