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The map label for this gene is yfbS [C]

Identifier: 148550672

GI number: 148550672

Start: 127207

End: 128514

Strand: Direct

Name: yfbS [C]

Synonym: Swit_5235

Alternate gene names: 148550672

Gene position: 127207-128514 (Clockwise)

Preceding gene: 148550671

Following gene: 148550674

Centisome position: 41.0

GC content: 66.67

Gene sequence:

>1308_bases
ATGACGATCGATCAAATTCTCACCTTGCTCGTGCTGGTCGGCGTGGTCGGCGTGATGATCTGGGACCGGCTGCGTGCCGA
CGTCGTGGCGCTTGCCGGCGCGGCGATCCTCCTCATGACCGGGGTGGTGCGACCGGTCGACGTGCAGGGCGCTTTCGCCA
GTCCCGCCATCATCGCCCTCGCCTCGCTGTTCGTCATTGCCTATGCGCTGGAACTCTCGGGCCTGCTCGACCGCGCGATC
GAACTCGGCGTCGGTCTCTGCCGGCGCCTGGGCGCCAAGGGGGTGTGGCTGCTCCTCTCGATGATCGGCGGCCTCTCCTG
TTTTCTCAATTCCACGCCGATCGTGGTGCTGGGCGCGCCGGTGATCCGCGATATCGCCCGCACCCTGGGACAGTCGCCCA
AGCGCTATCTGATGCCGCTCTCCTACATCACCGTGCTCACCGGCTGCTGCACGCTGGTGGGCACCTCGACGAACCTCCTC
GTCGACGACATGGCGAGCATTGCCGGACAGGCGCGCTTCGGCATTTTCGAGATCACGCCCGTGGGCCTGCCGATCGCCCT
GGTCGGCGGGCTCTATCTCTATTTCGTGAGCGGTCGGCTGCTGCGGGCGCATGAGAGCGACGAGCGGGACCGCGAGCCCG
GACCGCTCGAACCCGTCCATATCGGCAATGCCCAGGTCGGCGACGCGACGCTGTTCGCGCAAAAGCGCCCGTTCCAACCG
CTCAAGGCCGCGATGGCCTTTGCGATCTTTGCCGGCGCGATCGCGCTGGCGGCGTTCGGGGTCGCGCCGATCGCGGCGAC
GGCGCTGAGCGGCGCGGTCCTCCTGATCCTGCTGCGCGTGATCAGCGCCGACGAGGCCTATGGCGGACTGCGTCCGGAAA
TCCTGATCCTCATCGCGGGCATGGTGGTGATCGGCATCGCCATGGAATCGAGCGGGCTGGCGGGCGAGGCCTCGGAGTTC
CTGATTTCCAGCGTCCACGGGCTGAGCCCGCTCGTCGCGCTGATCGTCCTCTACCTCGCCACGATGGTGCTGACCGAGCT
TCTCTCCAACGCGACCGTGGCGGTGCTCGTGACGCCTGTCGCCGTGGCGCTCGCCGACAGTCTCGGCGTCAGCCCGCGTC
CGTTTCTCGTCGGGGTCATGATGGCCGCGAGCGCCGCTTTCGCGAACCCCTTCGGCTACCAGACCAATGTCATCGTCTAC
CAGATGGCGGGCTATCGCTATATGGACTTCGTCCGGGTTGGCCTGCCGCTCAACCTCCTCACCGCGATCGTGGCGATCCT
CGCGATCCAGGCCTTTTTTCCGTTCTGA

Upstream 100 bases:

>100_bases
CCGGGTGATACCAAATTGCAAGGCCGGCTCCACCCCGCCCGTCCTGTTTCTTTTGACCGGGCGTTGACAGGGGCGGACCT
GGGTTCGAGGCAGGGACGCG

Downstream 100 bases:

>100_bases
GCCGGACCGGATCGGCCCTTTCCAGCCGAAATAAAGACAGGACCCGCTGCGCGGGGGAAGCGCGGCGGATCCTGCCAGGG
GCTTTCCGCGCCGGAGGCAC

Product: citrate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 435; Mature: 434

Protein sequence:

>435_residues
MTIDQILTLLVLVGVVGVMIWDRLRADVVALAGAAILLMTGVVRPVDVQGAFASPAIIALASLFVIAYALELSGLLDRAI
ELGVGLCRRLGAKGVWLLLSMIGGLSCFLNSTPIVVLGAPVIRDIARTLGQSPKRYLMPLSYITVLTGCCTLVGTSTNLL
VDDMASIAGQARFGIFEITPVGLPIALVGGLYLYFVSGRLLRAHESDERDREPGPLEPVHIGNAQVGDATLFAQKRPFQP
LKAAMAFAIFAGAIALAAFGVAPIAATALSGAVLLILLRVISADEAYGGLRPEILILIAGMVVIGIAMESSGLAGEASEF
LISSVHGLSPLVALIVLYLATMVLTELLSNATVAVLVTPVAVALADSLGVSPRPFLVGVMMAASAAFANPFGYQTNVIVY
QMAGYRYMDFVRVGLPLNLLTAIVAILAIQAFFPF

Sequences:

>Translated_435_residues
MTIDQILTLLVLVGVVGVMIWDRLRADVVALAGAAILLMTGVVRPVDVQGAFASPAIIALASLFVIAYALELSGLLDRAI
ELGVGLCRRLGAKGVWLLLSMIGGLSCFLNSTPIVVLGAPVIRDIARTLGQSPKRYLMPLSYITVLTGCCTLVGTSTNLL
VDDMASIAGQARFGIFEITPVGLPIALVGGLYLYFVSGRLLRAHESDERDREPGPLEPVHIGNAQVGDATLFAQKRPFQP
LKAAMAFAIFAGAIALAAFGVAPIAATALSGAVLLILLRVISADEAYGGLRPEILILIAGMVVIGIAMESSGLAGEASEF
LISSVHGLSPLVALIVLYLATMVLTELLSNATVAVLVTPVAVALADSLGVSPRPFLVGVMMAASAAFANPFGYQTNVIVY
QMAGYRYMDFVRVGLPLNLLTAIVAILAIQAFFPF
>Mature_434_residues
TIDQILTLLVLVGVVGVMIWDRLRADVVALAGAAILLMTGVVRPVDVQGAFASPAIIALASLFVIAYALELSGLLDRAIE
LGVGLCRRLGAKGVWLLLSMIGGLSCFLNSTPIVVLGAPVIRDIARTLGQSPKRYLMPLSYITVLTGCCTLVGTSTNLLV
DDMASIAGQARFGIFEITPVGLPIALVGGLYLYFVSGRLLRAHESDERDREPGPLEPVHIGNAQVGDATLFAQKRPFQPL
KAAMAFAIFAGAIALAAFGVAPIAATALSGAVLLILLRVISADEAYGGLRPEILILIAGMVVIGIAMESSGLAGEASEFL
ISSVHGLSPLVALIVLYLATMVLTELLSNATVAVLVTPVAVALADSLGVSPRPFLVGVMMAASAAFANPFGYQTNVIVYQ
MAGYRYMDFVRVGLPLNLLTAIVAILAIQAFFPF

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=173, Percent_Identity=34.1040462427746, Blast_Score=85, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 45503; Mature: 45372

Theoretical pI: Translated: 5.76; Mature: 5.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIDQILTLLVLVGVVGVMIWDRLRADVVALAGAAILLMTGVVRPVDVQGAFASPAIIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ASLFVIAYALELSGLLDRAIELGVGLCRRLGAKGVWLLLSMIGGLSCFLNSTPIVVLGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCH
VIRDIARTLGQSPKRYLMPLSYITVLTGCCTLVGTSTNLLVDDMASIAGQARFGIFEITP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECC
VGLPIALVGGLYLYFVSGRLLRAHESDERDREPGPLEPVHIGNAQVGDATLFAQKRPFQP
CCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCHH
LKAAMAFAIFAGAIALAAFGVAPIAATALSGAVLLILLRVISADEAYGGLRPEILILIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHH
MVVIGIAMESSGLAGEASEFLISSVHGLSPLVALIVLYLATMVLTELLSNATVAVLVTPV
HHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH
AVALADSLGVSPRPFLVGVMMAASAAFANPFGYQTNVIVYQMAGYRYMDFVRVGLPLNLL
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHH
TAIVAILAIQAFFPF
HHHHHHHHHHHHCCC
>Mature Secondary Structure 
TIDQILTLLVLVGVVGVMIWDRLRADVVALAGAAILLMTGVVRPVDVQGAFASPAIIAL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHH
ASLFVIAYALELSGLLDRAIELGVGLCRRLGAKGVWLLLSMIGGLSCFLNSTPIVVLGAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEECCH
VIRDIARTLGQSPKRYLMPLSYITVLTGCCTLVGTSTNLLVDDMASIAGQARFGIFEITP
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEEECC
VGLPIALVGGLYLYFVSGRLLRAHESDERDREPGPLEPVHIGNAQVGDATLFAQKRPFQP
CCCHHHHHHHHHHHHHHCHHHCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHHCCCCCHH
LKAAMAFAIFAGAIALAAFGVAPIAATALSGAVLLILLRVISADEAYGGLRPEILILIAG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHH
MVVIGIAMESSGLAGEASEFLISSVHGLSPLVALIVLYLATMVLTELLSNATVAVLVTPV
HHHHHHHHCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHH
AVALADSLGVSPRPFLVGVMMAASAAFANPFGYQTNVIVYQMAGYRYMDFVRVGLPLNLL
HHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHCCCHHHH
TAIVAILAIQAFFPF
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]