Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
---|---|
Accession | NC_009507 |
Length | 310,228 |
Click here to switch to the map view.
The map label for this gene is 148550646
Identifier: 148550646
GI number: 148550646
Start: 97653
End: 98201
Strand: Direct
Name: 148550646
Synonym: Swit_5208
Alternate gene names: NA
Gene position: 97653-98201 (Clockwise)
Preceding gene: 148550645
Following gene: 148550648
Centisome position: 31.48
GC content: 59.02
Gene sequence:
>549_bases TTGGAAAAGGGACCATCGGATCAAGATATTTCGACGCGGCGCTCGACAACACCTCCGGGGCTGATCGAGACTCGCACCCC GTCCTATCCCGGCACGGAGGCGTCGGTTGGTACGGTCATGACCTTGGCCGACGCCTACTGGGATGCCGCGCACAGGCTGC TGCCGCAGATCGAGAAAGGCCGGAGTGTCTCGTCCACCCCGGCTAGGCTGTGCGCCATTCAGTCGATCGAGACTTACCTC AATGCGTTTCTGCTCTTTCATTCGGTCGATCGAAAGCAGGTCCGGGGATTGCAGCATGATCTCGCCGAACGGACGCGGTT GGCTGTCGAGAAGGGATTGTCTCTCCGGCGCCGTACCGCGGAGCATCTGGTCCGATTGAGCGATCAGCGCGATTATCTCA TGGTGAGATATGGGCCGGAACAGCTCAGCGATCTGTCCGAAATCAATCGGATGTTCGCCACGCTCAAAGAGATCGCGGAG AAGGTGCGGGCAGCGATTTTCGAACAGCCCTATGATCGCTCTGACCGGAGGTTCCGGGTATATTGGTGA
Upstream 100 bases:
>100_bases TCGGCAAAGGCGACGAAATCTGCGCCGGTTCGTCGCGGAAGTCCGAAATCCACCGAAGGGCAGCCCGCCTAATAGGACTT CCTCTGGGGAGACGGCCGGT
Downstream 100 bases:
>100_bases TCCAGAGCCCGCCTCAGAGTGTGATGTCCAGAGCCGAGGCGCGCTGGCGGGATTGCAATTCAGAATAGGGTCAACTGCTC GCCGACCGTTCTGGTCCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MEKGPSDQDISTRRSTTPPGLIETRTPSYPGTEASVGTVMTLADAYWDAAHRLLPQIEKGRSVSSTPARLCAIQSIETYL NAFLLFHSVDRKQVRGLQHDLAERTRLAVEKGLSLRRRTAEHLVRLSDQRDYLMVRYGPEQLSDLSEINRMFATLKEIAE KVRAAIFEQPYDRSDRRFRVYW
Sequences:
>Translated_182_residues MEKGPSDQDISTRRSTTPPGLIETRTPSYPGTEASVGTVMTLADAYWDAAHRLLPQIEKGRSVSSTPARLCAIQSIETYL NAFLLFHSVDRKQVRGLQHDLAERTRLAVEKGLSLRRRTAEHLVRLSDQRDYLMVRYGPEQLSDLSEINRMFATLKEIAE KVRAAIFEQPYDRSDRRFRVYW >Mature_182_residues MEKGPSDQDISTRRSTTPPGLIETRTPSYPGTEASVGTVMTLADAYWDAAHRLLPQIEKGRSVSSTPARLCAIQSIETYL NAFLLFHSVDRKQVRGLQHDLAERTRLAVEKGLSLRRRTAEHLVRLSDQRDYLMVRYGPEQLSDLSEINRMFATLKEIAE KVRAAIFEQPYDRSDRRFRVYW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20912; Mature: 20912
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKGPSDQDISTRRSTTPPGLIETRTPSYPGTEASVGTVMTLADAYWDAAHRLLPQIEKG CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RSVSSTPARLCAIQSIETYLNAFLLFHSVDRKQVRGLQHDLAERTRLAVEKGLSLRRRTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHLVRLSDQRDYLMVRYGPEQLSDLSEINRMFATLKEIAEKVRAAIFEQPYDRSDRRFRV HHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YW CC >Mature Secondary Structure MEKGPSDQDISTRRSTTPPGLIETRTPSYPGTEASVGTVMTLADAYWDAAHRLLPQIEKG CCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC RSVSSTPARLCAIQSIETYLNAFLLFHSVDRKQVRGLQHDLAERTRLAVEKGLSLRRRTA CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EHLVRLSDQRDYLMVRYGPEQLSDLSEINRMFATLKEIAEKVRAAIFEQPYDRSDRRFRV HHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE YW CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA