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The map label for this gene is rosR [H]

Identifier: 148550645

GI number: 148550645

Start: 97073

End: 97624

Strand: Direct

Name: rosR [H]

Synonym: Swit_5207

Alternate gene names: 148550645

Gene position: 97073-97624 (Clockwise)

Preceding gene: 148550643

Following gene: 148550646

Centisome position: 31.29

GC content: 58.33

Gene sequence:

>552_bases
ATGTTCCCGGTAGCGAATAGTCTTCCGGGTTCTTCAACCAGAGAAGGCAAGATCATCATGAGCGACGTATCGGAAAACGA
TAGCACGCTGATTACCCTGACCGCTGATATCGTCGCGGCGCATGTGACGAACAACAGCGTGGCGGTGGCGGATTTGCCGT
CCCTGATCCAGAATGTTCACGGAGCGTTGAGCAATCTCGGCAAAAGTGAAACGGCGCCCGAGACAAAGCAGGAGCCGGCG
GTATCCGTGCGTGCCTCGGTGAAACCTGACTACATCGTCTGCCTGGAAGACGGCAAAAAGCTCAAGATGCTCAAGCGTCA
TCTCATGACGCACTATCAGATGACGCCGGCGGACTATCGTTCGAAGTGGAATCTTCCGGCCGACTATCCGATGGTCGCGC
CCAATTACGCCGAGCAGCGTCGCACGCTCGCCAAGAGCATCGGACTTGGCCGCAAGCCCAAGGGGTCCAGCGCTGCCGCA
TCGGCAAAGGCGACGAAATCTGCGCCGGTTCGTCGCGGAAGTCCGAAATCCACCGAAGGGCAGCCCGCCTAA

Upstream 100 bases:

>100_bases
ACGGAATGTTCGGGTTTGGACGCGATCAGATATCGTACGTCCCTGTTTGGCGCGGGTGAATAGGTGCTCCTGTGAGCCTT
TGGGAACTTCACAGGGCGCC

Downstream 100 bases:

>100_bases
TAGGACTTCCTCTGGGGAGACGGCCGGTTTGGAAAAGGGACCATCGGATCAAGATATTTCGACGCGGCGCTCGACAACAC
CTCCGGGGCTGATCGAGACT

Product: MucR family transcriptional regulator

Products: NA

Alternate protein names: Nodulation competitiveness determinant [H]

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MFPVANSLPGSSTREGKIIMSDVSENDSTLITLTADIVAAHVTNNSVAVADLPSLIQNVHGALSNLGKSETAPETKQEPA
VSVRASVKPDYIVCLEDGKKLKMLKRHLMTHYQMTPADYRSKWNLPADYPMVAPNYAEQRRTLAKSIGLGRKPKGSSAAA
SAKATKSAPVRRGSPKSTEGQPA

Sequences:

>Translated_183_residues
MFPVANSLPGSSTREGKIIMSDVSENDSTLITLTADIVAAHVTNNSVAVADLPSLIQNVHGALSNLGKSETAPETKQEPA
VSVRASVKPDYIVCLEDGKKLKMLKRHLMTHYQMTPADYRSKWNLPADYPMVAPNYAEQRRTLAKSIGLGRKPKGSSAAA
SAKATKSAPVRRGSPKSTEGQPA
>Mature_183_residues
MFPVANSLPGSSTREGKIIMSDVSENDSTLITLTADIVAAHVTNNSVAVADLPSLIQNVHGALSNLGKSETAPETKQEPA
VSVRASVKPDYIVCLEDGKKLKMLKRHLMTHYQMTPADYRSKWNLPADYPMVAPNYAEQRRTLAKSIGLGRKPKGSSAAA
SAKATKSAPVRRGSPKSTEGQPA

Specific function: Unknown

COG id: COG4957

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ros/mucR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008807
- InterPro:   IPR015880 [H]

Pfam domain/function: PF05443 ROS_MUCR [H]

EC number: NA

Molecular weight: Translated: 19555; Mature: 19555

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPVANSLPGSSTREGKIIMSDVSENDSTLITLTADIVAAHVTNNSVAVADLPSLIQNVH
CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHEEEECCCCCEEEHHHHHHHHHHH
GALSNLGKSETAPETKQEPAVSVRASVKPDYIVCLEDGKKLKMLKRHLMTHYQMTPADYR
HHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHH
SKWNLPADYPMVAPNYAEQRRTLAKSIGLGRKPKGSSAAASAKATKSAPVRRGSPKSTEG
HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
QPA
CCC
>Mature Secondary Structure
MFPVANSLPGSSTREGKIIMSDVSENDSTLITLTADIVAAHVTNNSVAVADLPSLIQNVH
CCCCCCCCCCCCCCCCEEEEEECCCCCCEEEEEEHHHEEEECCCCCEEEHHHHHHHHHHH
GALSNLGKSETAPETKQEPAVSVRASVKPDYIVCLEDGKKLKMLKRHLMTHYQMTPADYR
HHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCCCHHHH
SKWNLPADYPMVAPNYAEQRRTLAKSIGLGRKPKGSSAAASAKATKSAPVRRGSPKSTEG
HCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC
QPA
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9057324 [H]