Definition Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence.
Accession NC_009507
Length 310,228

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The map label for this gene is 148550648

Identifier: 148550648

GI number: 148550648

Start: 99231

End: 99884

Strand: Direct

Name: 148550648

Synonym: Swit_5210

Alternate gene names: NA

Gene position: 99231-99884 (Clockwise)

Preceding gene: 148550646

Following gene: 148550649

Centisome position: 31.99

GC content: 68.04

Gene sequence:

>654_bases
ATGGTTGGTCGCGTATTTGCTGAGCGACATGGCCTTGCGGTTGAGCGCCACCGCGAGATCGGCGAGCGACACACCGGTGT
TGAAGGCGACGTCGAGCGCGCGCGTTTCATCGTCGCTGAAAGGCCGAATGTAGCCGTGGACAAGGCCGAGGCTATTCGCG
CGCGAGGTGAGCGCAGCTTTGGTCCGTCCCAGGCTTGCCGCCAGGACCTTGGTCGGGACACGGCCATAGTCCGCACGAAG
GCGCGCCTCGTCGGCCTCGGTCCAGTCCGGACCAAGCCGCCAGCCATTGCGGTTGGCATGAAGCCCGCGCAGGCCCAGAT
ATTCGGCGCGGTGGCGCAGCGATCCAGCGGTGCGGCCAAGCTGGCGGCGCAGCGGGGTGAGACTCGTACCGTCGATGTAG
GCCTTGCGCAGCAGGGCGTCTTCTTCCGGCGTCCAGGCCCTGCCCCAGCCGCGGCCATAGCCCAGCTTGCGGATGGCGAG
GCCGAAGCCGCGGACCGTGCGTTGGGGAAAGCCTTCCTGGCCGAGCATCCCGACGATCGCCGTGTAGCGATGACCCGCTT
CGGCCAGGTCGAGAGCCCTCGCCGTTTCCGCCTCCGACCAGTCCGGCGGATGGTTCGCATGCACGATGCCGAGAGCTCCG
GCCCGGCTGGATAG

Upstream 100 bases:

>100_bases
GGCTCGGGCGAATGGCTCGGCGCCCGAGCCCGGGTCAGTTCGTGGCCAAGAGCGCTTCGAGCGTCACGGCGCGGCGCGGC
CGGCGGCCGAACTGATAGCC

Downstream 100 bases:

>100_bases
GCCGCCGAACGGCCGGCCGATAAGGGTGGCGATCTGCGCCAACGGCACGCCGCGGCGATAGCCTTCGACGAGCTGGGCGT
CCTCCCAGGGCGTCCATTCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MVGRVFAERHGLAVERHREIGERHTGVEGDVERARFIVAERPNVAVDKAEAIRARGERSFGPSQACRQDLGRDTAIVRTK
ARLVGLGPVRTKPPAIAVGMKPAQAQIFGAVAQRSSGAAKLAAQRGETRTVDVGLAQQGVFFRRPGPAPAAAIAQLADGE
AEAADRALGKAFLAEHPDDRRVAMTRFGQVESPRRFRLRPVRRMVRMHDAESSGPAG

Sequences:

>Translated_217_residues
MVGRVFAERHGLAVERHREIGERHTGVEGDVERARFIVAERPNVAVDKAEAIRARGERSFGPSQACRQDLGRDTAIVRTK
ARLVGLGPVRTKPPAIAVGMKPAQAQIFGAVAQRSSGAAKLAAQRGETRTVDVGLAQQGVFFRRPGPAPAAAIAQLADGE
AEAADRALGKAFLAEHPDDRRVAMTRFGQVESPRRFRLRPVRRMVRMHDAESSGPAG
>Mature_217_residues
MVGRVFAERHGLAVERHREIGERHTGVEGDVERARFIVAERPNVAVDKAEAIRARGERSFGPSQACRQDLGRDTAIVRTK
ARLVGLGPVRTKPPAIAVGMKPAQAQIFGAVAQRSSGAAKLAAQRGETRTVDVGLAQQGVFFRRPGPAPAAAIAQLADGE
AEAADRALGKAFLAEHPDDRRVAMTRFGQVESPRRFRLRPVRRMVRMHDAESSGPAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23409; Mature: 23409

Theoretical pI: Translated: 11.82; Mature: 11.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVGRVFAERHGLAVERHREIGERHTGVEGDVERARFIVAERPNVAVDKAEAIRARGERSF
CCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCHHHHHHHHHCCCCCC
GPSQACRQDLGRDTAIVRTKARLVGLGPVRTKPPAIAVGMKPAQAQIFGAVAQRSSGAAK
CHHHHHHHHHCCCCEEEEHHHHEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHH
LAAQRGETRTVDVGLAQQGVFFRRPGPAPAAAIAQLADGEAEAADRALGKAFLAEHPDDR
HHHHCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
RVAMTRFGQVESPRRFRLRPVRRMVRMHDAESSGPAG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MVGRVFAERHGLAVERHREIGERHTGVEGDVERARFIVAERPNVAVDKAEAIRARGERSF
CCCCHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCCHHHHHHHHHCCCCCC
GPSQACRQDLGRDTAIVRTKARLVGLGPVRTKPPAIAVGMKPAQAQIFGAVAQRSSGAAK
CHHHHHHHHHCCCCEEEEHHHHEEECCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCHHH
LAAQRGETRTVDVGLAQQGVFFRRPGPAPAAAIAQLADGEAEAADRALGKAFLAEHPDDR
HHHHCCCCEEEEECCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCC
RVAMTRFGQVESPRRFRLRPVRRMVRMHDAESSGPAG
HHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA