Definition | Sphingomonas wittichii RW1 plasmid pSWIT01, complete sequence. |
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Accession | NC_009507 |
Length | 310,228 |
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The map label for this gene is rosAR [H]
Identifier: 148550629
GI number: 148550629
Start: 79657
End: 80583
Strand: Direct
Name: rosAR [H]
Synonym: Swit_5190
Alternate gene names: 148550629
Gene position: 79657-80583 (Clockwise)
Preceding gene: 148550612
Following gene: 148550636
Centisome position: 25.68
GC content: 66.24
Gene sequence:
>927_bases ATGGCCGAGGCCGAACAGTCGGACGTGATGTCTCTGACCGTGGCGCTGCTCAGCGCCTATTTTGCGAACAACACCGTGCC GAGCAGCGAACTGCCCGCGCTGGTCGAGGGAACTCGAAAAGCCTTGTTGGGCGATGCACCAGTGGTGTCGCCAGCCCCTG AAGAGACAGTGTCCGCGCCGGTGTCAGTTGAACCAGCGGCTGTGCCGCCGACACCAGCCCCCGAGTTCAAGCCAGCGGTG ACGGTAGATGCAAGCCTTGCGTCGCCCGATCAGATACTGAGCCTGATCGACGGCAAGCCTTATAAGTCCCTGAAACGCCA TCTCTCGACTCACGGCCTGACGCCCGCAGAATATCGCGCGCGCTATGATCTGCCCGCGGACTATCCCATGGTCGCACCCG GTTATTCCGCCGCGCGCCGGGAGGCCGCCCTGAAACTTGGTCTTGGCGGCAAGCGGAAGGACGTCGCCGCTAATCCGGCG CTAGCCGAGGCGGGCAGCGAAGCCCCGGCAGCCGAAGTGGCGCCTGCGGAAGTGGTCGCGGAAGTGCCCGCGCCGGTGCG CAAGGCTCGAGTGAATGCCTCTGCCCCGGCAACTAAGGCGAAGCCCAATGCCGTAGCCGGGAAGGGCAAGCCCAGCGCTG TCGCCGAGACCGTTGCGGCGCCGGCAGGCGAGCCGGCCCCAACGCCCGAAGCGACTGCCAGCGAAGCTGCGCAAGTGAAG GCGACGCCCGCTCGCGGGCCGCGCGCGAAGGCAGCCCCTGCAAAGGCCTCGCCAAAAACGTCGAACGCCAAGGCCGCCAT CGGCAAAGGGAAACCGGCAGCGGCTGTCGAGCCTGCAAAGCCAAAGCGCAGCCGTGCGACGAAAGCTGACACCCCGCCGA CAGCACCGGTCGAAATCGCTCCTGCTGAAACGGCCTCGGCAGAATAA
Upstream 100 bases:
>100_bases CCCTTTGACTTGCACGCCGAATGACGGCACGTATCTGTTTACGCTTGCGCAATCACGCATGGGTCAAGACCAGTCTATCC AAACAAAAGAAGGAACCTGC
Downstream 100 bases:
>100_bases TGCTATGGTCCGAGCGCGGTGACGCAACCGGACCATCACCGTTCACAGGGGTGGCGAGCCACCTGCTTTAGCACAGGGAA ACGACCTTCATAGGTAGCGG
Product: MucR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 307
Protein sequence:
>308_residues MAEAEQSDVMSLTVALLSAYFANNTVPSSELPALVEGTRKALLGDAPVVSPAPEETVSAPVSVEPAAVPPTPAPEFKPAV TVDASLASPDQILSLIDGKPYKSLKRHLSTHGLTPAEYRARYDLPADYPMVAPGYSAARREAALKLGLGGKRKDVAANPA LAEAGSEAPAAEVAPAEVVAEVPAPVRKARVNASAPATKAKPNAVAGKGKPSAVAETVAAPAGEPAPTPEATASEAAQVK ATPARGPRAKAAPAKASPKTSNAKAAIGKGKPAAAVEPAKPKRSRATKADTPPTAPVEIAPAETASAE
Sequences:
>Translated_308_residues MAEAEQSDVMSLTVALLSAYFANNTVPSSELPALVEGTRKALLGDAPVVSPAPEETVSAPVSVEPAAVPPTPAPEFKPAV TVDASLASPDQILSLIDGKPYKSLKRHLSTHGLTPAEYRARYDLPADYPMVAPGYSAARREAALKLGLGGKRKDVAANPA LAEAGSEAPAAEVAPAEVVAEVPAPVRKARVNASAPATKAKPNAVAGKGKPSAVAETVAAPAGEPAPTPEATASEAAQVK ATPARGPRAKAAPAKASPKTSNAKAAIGKGKPAAAVEPAKPKRSRATKADTPPTAPVEIAPAETASAE >Mature_307_residues AEAEQSDVMSLTVALLSAYFANNTVPSSELPALVEGTRKALLGDAPVVSPAPEETVSAPVSVEPAAVPPTPAPEFKPAVT VDASLASPDQILSLIDGKPYKSLKRHLSTHGLTPAEYRARYDLPADYPMVAPGYSAARREAALKLGLGGKRKDVAANPAL AEAGSEAPAAEVAPAEVVAEVPAPVRKARVNASAPATKAKPNAVAGKGKPSAVAETVAAPAGEPAPTPEATASEAAQVKA TPARGPRAKAAPAKASPKTSNAKAAIGKGKPAAAVEPAKPKRSRATKADTPPTAPVEIAPAETASAE
Specific function: Unknown
COG id: COG4957
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ros/mucR family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008807 - InterPro: IPR015880 [H]
Pfam domain/function: PF05443 ROS_MUCR [H]
EC number: NA
Molecular weight: Translated: 30912; Mature: 30781
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEAEQSDVMSLTVALLSAYFANNTVPSSELPALVEGTRKALLGDAPVVSPAPEETVSAP CCCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCC VSVEPAAVPPTPAPEFKPAVTVDASLASPDQILSLIDGKPYKSLKRHLSTHGLTPAEYRA CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHE RYDLPADYPMVAPGYSAARREAALKLGLGGKRKDVAANPALAEAGSEAPAAEVAPAEVVA ECCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH EVPAPVRKARVNASAPATKAKPNAVAGKGKPSAVAETVAAPAGEPAPTPEATASEAAQVK HCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHEEE ATPARGPRAKAAPAKASPKTSNAKAAIGKGKPAAAVEPAKPKRSRATKADTPPTAPVEIA CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEC PAETASAE CCCCCCCC >Mature Secondary Structure AEAEQSDVMSLTVALLSAYFANNTVPSSELPALVEGTRKALLGDAPVVSPAPEETVSAP CCCHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCHHHHCCC VSVEPAAVPPTPAPEFKPAVTVDASLASPDQILSLIDGKPYKSLKRHLSTHGLTPAEYRA CCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHE RYDLPADYPMVAPGYSAARREAALKLGLGGKRKDVAANPALAEAGSEAPAAEVAPAEVVA ECCCCCCCCEECCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHH EVPAPVRKARVNASAPATKAKPNAVAGKGKPSAVAETVAAPAGEPAPTPEATASEAAQVK HCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHEEE ATPARGPRAKAAPAKASPKTSNAKAAIGKGKPAAAVEPAKPKRSRATKADTPPTAPVEIA CCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCEEEC PAETASAE CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7579618 [H]