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The map label for this gene is 148550636

Identifier: 148550636

GI number: 148550636

Start: 86750

End: 87901

Strand: Direct

Name: 148550636

Synonym: Swit_5197

Alternate gene names: NA

Gene position: 86750-87901 (Clockwise)

Preceding gene: 148550629

Following gene: 148550638

Centisome position: 27.96

GC content: 59.29

Gene sequence:

>1152_bases
ATGGAGAACCAGTCATCGGATTATTGCGTTCAGACCTCTGTCATTGTCAGCGTCGAACTCAGCAAACGCACTTGGCTTGT
GGCATCGCTTACGCCAGGTGCGGCTAAGATCTCGCTGCGTACGATTCCCGCGGGCGACAGCGCAGCCCTACTCGGTCACC
TTCGCAATCTCGAAAGCAAGACGGGCGAGCGTATTGGTAAGCCCGCCGCCATTCGCCTATGCTTCGAGATCGGCTATGAT
GGCTTCTGGCTGGCACGACTGTTGCGGGCAAATGGCATCGATACTTACGTTCTTGATCCTGCCAGCTTCCTTGTATCGCG
CCGCGGCAAGCGCGTGAAGACTGACCGCATCGACGCCGAAGCCATGATCGGTATCCTCAAAGCCTATCTCGCAGGTGACA
AAAGCGTGTGTCGTGTCGTGGATGTGCCAACGCCGGATGAGGAAGATGCGCGCCGAGTCATGCGCGAGCGTGGCGATCTT
GTGCACGAGCGCACCCGGATTATTTCGCGAATTAGGGGACTACTGGCCTTACAAGGCATCCAGTCGGTCAAAGCGATCAG
CGGCGGTGACTGGTCAAAGCAACTCGACGATATGCGTACCGGCGATGGACGGCTGCTGCCGCCAAACCTTCGTCGCCAGA
TTGAGCGGTGCTTCGGTCGCCTCGAGCTGCTCAATGAACAGATCAAAAGCATTGAACGCGACCGCGCCGATGTGGTTCTG
GACGAAGCCTCGACGTTTCCGTGCCGCGAAAAAGCGATCCGTCTCGAGCAACTCAAGGGCATCGGTGCCAACAGCGCAGT
GATGCTTGTTGCCGAGGTGTTTTGCCGCAAGTTTGAAAGCCGACGACACGTCGCTGCTTTTCTTGGGCTGGCCCCCGCGC
CCTACGCGAGTGGAGACGTCTCACGCGATCAGGGCATTAGCAAGGCTGGCAACCACGGAACGCGCGTTCTGATGGTGGAG
CTTGCGTGGTGTTGGCTACGATATCAGCCAAGCAGCGAGTTGGCGGTTTGGTATCGCAACCGCTTCAAGGGAAACGGCGG
GCGCGCGGCCAAGGTCGGGATTGTGGCGCTCGCCCGAAAATTGCTAATCGCGCTTTGGCGCTTCGTGGAAACCGGACTGG
TCCCGCAGGGCGCCGAGCTCCGCGCCGTCTGA

Upstream 100 bases:

>100_bases
GGGTCTTCGGAGCCGCACTCGAGCGCCATGTCGTAATAGATCCTATGCAGATCGGTTTCGGCTATTCCGTTGAACCGTCA
ACTTTCGCGGAGAACGTCTC

Downstream 100 bases:

>100_bases
TGCCTATGTTGCAACAGGCTCAATAAGGCGACGCGGGTTGGTGCGATGCGTGACCGGGAAGATTGATGGCGCCTAGAAAC
GCCCAGTAGTAGTTTGGTCC

Product: transposase IS116/IS110/IS902 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MENQSSDYCVQTSVIVSVELSKRTWLVASLTPGAAKISLRTIPAGDSAALLGHLRNLESKTGERIGKPAAIRLCFEIGYD
GFWLARLLRANGIDTYVLDPASFLVSRRGKRVKTDRIDAEAMIGILKAYLAGDKSVCRVVDVPTPDEEDARRVMRERGDL
VHERTRIISRIRGLLALQGIQSVKAISGGDWSKQLDDMRTGDGRLLPPNLRRQIERCFGRLELLNEQIKSIERDRADVVL
DEASTFPCREKAIRLEQLKGIGANSAVMLVAEVFCRKFESRRHVAAFLGLAPAPYASGDVSRDQGISKAGNHGTRVLMVE
LAWCWLRYQPSSELAVWYRNRFKGNGGRAAKVGIVALARKLLIALWRFVETGLVPQGAELRAV

Sequences:

>Translated_383_residues
MENQSSDYCVQTSVIVSVELSKRTWLVASLTPGAAKISLRTIPAGDSAALLGHLRNLESKTGERIGKPAAIRLCFEIGYD
GFWLARLLRANGIDTYVLDPASFLVSRRGKRVKTDRIDAEAMIGILKAYLAGDKSVCRVVDVPTPDEEDARRVMRERGDL
VHERTRIISRIRGLLALQGIQSVKAISGGDWSKQLDDMRTGDGRLLPPNLRRQIERCFGRLELLNEQIKSIERDRADVVL
DEASTFPCREKAIRLEQLKGIGANSAVMLVAEVFCRKFESRRHVAAFLGLAPAPYASGDVSRDQGISKAGNHGTRVLMVE
LAWCWLRYQPSSELAVWYRNRFKGNGGRAAKVGIVALARKLLIALWRFVETGLVPQGAELRAV
>Mature_383_residues
MENQSSDYCVQTSVIVSVELSKRTWLVASLTPGAAKISLRTIPAGDSAALLGHLRNLESKTGERIGKPAAIRLCFEIGYD
GFWLARLLRANGIDTYVLDPASFLVSRRGKRVKTDRIDAEAMIGILKAYLAGDKSVCRVVDVPTPDEEDARRVMRERGDL
VHERTRIISRIRGLLALQGIQSVKAISGGDWSKQLDDMRTGDGRLLPPNLRRQIERCFGRLELLNEQIKSIERDRADVVL
DEASTFPCREKAIRLEQLKGIGANSAVMLVAEVFCRKFESRRHVAAFLGLAPAPYASGDVSRDQGISKAGNHGTRVLMVE
LAWCWLRYQPSSELAVWYRNRFKGNGGRAAKVGIVALARKLLIALWRFVETGLVPQGAELRAV

Specific function: Unknown

COG id: COG3547

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 20 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003346
- InterPro:   IPR002525 [H]

Pfam domain/function: PF02371 Transposase_20; PF01548 Transposase_9 [H]

EC number: NA

Molecular weight: Translated: 42478; Mature: 42478

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQSSDYCVQTSVIVSVELSKRTWLVASLTPGAAKISLRTIPAGDSAALLGHLRNLESK
CCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH
TGERIGKPAAIRLCFEIGYDGFWLARLLRANGIDTYVLDPASFLVSRRGKRVKTDRIDAE
HHHHHCCCHHEEEHHHHCCCHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCHHHCCHH
AMIGILKAYLAGDKSVCRVVDVPTPDEEDARRVMRERGDLVHERTRIISRIRGLLALQGI
HHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVKAISGGDWSKQLDDMRTGDGRLLPPNLRRQIERCFGRLELLNEQIKSIERDRADVVL
HHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
DEASTFPCREKAIRLEQLKGIGANSAVMLVAEVFCRKFESRRHVAAFLGLAPAPYASGDV
ECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SRDQGISKAGNHGTRVLMVELAWCWLRYQPSSELAVWYRNRFKGNGGRAAKVGIVALARK
CHHCCCCCCCCCCCEEEHHEEHHHHHEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
LLIALWRFVETGLVPQGAELRAV
HHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MENQSSDYCVQTSVIVSVELSKRTWLVASLTPGAAKISLRTIPAGDSAALLGHLRNLESK
CCCCCCCEEEEEEEEEEEEECCCEEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHH
TGERIGKPAAIRLCFEIGYDGFWLARLLRANGIDTYVLDPASFLVSRRGKRVKTDRIDAE
HHHHHCCCHHEEEHHHHCCCHHHHHHHHHHCCCCEEEECHHHHHHHCCCCCCCHHHCCHH
AMIGILKAYLAGDKSVCRVVDVPTPDEEDARRVMRERGDLVHERTRIISRIRGLLALQGI
HHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVKAISGGDWSKQLDDMRTGDGRLLPPNLRRQIERCFGRLELLNEQIKSIERDRADVVL
HHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
DEASTFPCREKAIRLEQLKGIGANSAVMLVAEVFCRKFESRRHVAAFLGLAPAPYASGDV
ECCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
SRDQGISKAGNHGTRVLMVELAWCWLRYQPSSELAVWYRNRFKGNGGRAAKVGIVALARK
CHHCCCCCCCCCCCEEEHHEEHHHHHEECCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHH
LLIALWRFVETGLVPQGAELRAV
HHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]