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The map label for this gene is yvdB [H]

Identifier: 148550612

GI number: 148550612

Start: 67039

End: 68319

Strand: Direct

Name: yvdB [H]

Synonym: Swit_5173

Alternate gene names: 148550612

Gene position: 67039-68319 (Clockwise)

Preceding gene: 148550611

Following gene: 148550629

Centisome position: 21.61

GC content: 65.81

Gene sequence:

>1281_bases
ATGCCTGACGGAACGGCGACATCGCATCTCTTCCGGCCGAAGCTGCTCACGGTCCTGAGCGAGGGCTACTCCTTCTCGTC
GTTTCGCAAGGACGTGCTGGCCGCCGTGACGGTCGCGATCGTCGCTCTGCCGCTGTCGATGGCGATCGCCGTGGCTTCGG
GGGTGTCGCCCGAGCGAGGGCTCTATACCGCGATCATCGGCGGATTCCTCGTTTCGGCCTTGGGCGGTAGCCGCTATCAG
ATTGGGGGTCCCGCCGGGGCTTTCATTGTTCTGGTCGCGGCGACCACGACGAAATTCGGTCTGAACGGCCTCCTCGTCAC
CGTGATGCTGTCCGGGGCCCTGCTGACGCTGATTGGACTTTCGCGGCTGGGCTCATTGATCCGCCATATTCCCCATCCGG
TGACGGTGGGCTTCACCTGCGGCATTGCGGTGACGATCTTCTCCGGAGAAATCCGGGACCTCTTCGGTCTTCATCTCGAC
GGAGCGGAACCTGGCCCCCTCATCCCCAAGCTGGTGGGGCTGGGCAACGCGGCTTCGACGGTGACGCCCGCGGCCGCGGT
GCTCGGCCTGGGATGCGCCGCGCTGATTTTCGTGGTGCGCCGGTTCCGGCCGAACTGGCCCGGTATGCTGATCGCGGTCG
TCCTGGCTTCGATAGCTGCCGCCTGGCTGCAGCTTCCGGCAGAGACGATCGGCAGCCGTTTCGGAGAGATCCCGCGTGGG
CTTCCGACGCCGCAGGCGCCGCAGCTGTCGTGGGCGCTGGTTCTCCAGCTGCTGCCGTCGGCCCTGTCGTTTACGCTGCT
CGGCGGCGTCGAAAGTCTGCTGTCAGCGAAGGTCGCCGACAGCATGTCCGGGCGCAAGCATCGCTCCAACATGGAGCTTG
TTGCGCAGGGGCTTGCCAATATCGTGTCCGCCTTGTTCGGAGGGATCAGCGTCACCGGCACGATCGCACGCACAGCAACC
AACATTCGGGCCGGCGCGATCAGTCCGCTGTCGGGCATGATGCACGCGCTGTTCGTCCTGCTCTTCATGCTCGTCGCGGC
ACCGCTCGCACGGTACGTTCCGCTCTCCGCGCTCGCCGGCGTCCTTCTGGTGGTGTGCTGGAACATGGCCGAGAAGGCGG
AGTTTCTGCGCCTGATCCGCAGCTGGCCCACGGCCTTGGTGCTCCTGGCGACCTTTGGGCTGACCCTGGTCAAGGACCTG
ACCTTCGGGATCGTCGCGGGATGCGTCGTCGCTGCGCTGCTGGCCATGGCACGACGACGGGTTCCGCAAGAGGGAGACTG
A

Upstream 100 bases:

>100_bases
GCACGAGTGGCGGGCGTGGCGTCCGGCTGCGCGATCCCACCAGCCCGACCCTGCGCGAGCCCGTGCGGCGCACGCCGGAC
AATGCGTCGGCGTCATAGCG

Downstream 100 bases:

>100_bases
AGCCGGAATGCAGACGTGCGGGCTGCCGGGTAAATGAAAACAGGGCCCGCTTCGCGAGAAGCGAAGCGAGCCCAGCGGGA
GGGTGTGCCCGGCCTGGAGG

Product: sulphate transporter

Products: Proton [Cytoplasm]; SO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 426; Mature: 425

Protein sequence:

>426_residues
MPDGTATSHLFRPKLLTVLSEGYSFSSFRKDVLAAVTVAIVALPLSMAIAVASGVSPERGLYTAIIGGFLVSALGGSRYQ
IGGPAGAFIVLVAATTTKFGLNGLLVTVMLSGALLTLIGLSRLGSLIRHIPHPVTVGFTCGIAVTIFSGEIRDLFGLHLD
GAEPGPLIPKLVGLGNAASTVTPAAAVLGLGCAALIFVVRRFRPNWPGMLIAVVLASIAAAWLQLPAETIGSRFGEIPRG
LPTPQAPQLSWALVLQLLPSALSFTLLGGVESLLSAKVADSMSGRKHRSNMELVAQGLANIVSALFGGISVTGTIARTAT
NIRAGAISPLSGMMHALFVLLFMLVAAPLARYVPLSALAGVLLVVCWNMAEKAEFLRLIRSWPTALVLLATFGLTLVKDL
TFGIVAGCVVAALLAMARRRVPQEGD

Sequences:

>Translated_426_residues
MPDGTATSHLFRPKLLTVLSEGYSFSSFRKDVLAAVTVAIVALPLSMAIAVASGVSPERGLYTAIIGGFLVSALGGSRYQ
IGGPAGAFIVLVAATTTKFGLNGLLVTVMLSGALLTLIGLSRLGSLIRHIPHPVTVGFTCGIAVTIFSGEIRDLFGLHLD
GAEPGPLIPKLVGLGNAASTVTPAAAVLGLGCAALIFVVRRFRPNWPGMLIAVVLASIAAAWLQLPAETIGSRFGEIPRG
LPTPQAPQLSWALVLQLLPSALSFTLLGGVESLLSAKVADSMSGRKHRSNMELVAQGLANIVSALFGGISVTGTIARTAT
NIRAGAISPLSGMMHALFVLLFMLVAAPLARYVPLSALAGVLLVVCWNMAEKAEFLRLIRSWPTALVLLATFGLTLVKDL
TFGIVAGCVVAALLAMARRRVPQEGD
>Mature_425_residues
PDGTATSHLFRPKLLTVLSEGYSFSSFRKDVLAAVTVAIVALPLSMAIAVASGVSPERGLYTAIIGGFLVSALGGSRYQI
GGPAGAFIVLVAATTTKFGLNGLLVTVMLSGALLTLIGLSRLGSLIRHIPHPVTVGFTCGIAVTIFSGEIRDLFGLHLDG
AEPGPLIPKLVGLGNAASTVTPAAAVLGLGCAALIFVVRRFRPNWPGMLIAVVLASIAAAWLQLPAETIGSRFGEIPRGL
PTPQAPQLSWALVLQLLPSALSFTLLGGVESLLSAKVADSMSGRKHRSNMELVAQGLANIVSALFGGISVTGTIARTATN
IRAGAISPLSGMMHALFVLLFMLVAAPLARYVPLSALAGVLLVVCWNMAEKAEFLRLIRSWPTALVLLATFGLTLVKDLT
FGIVAGCVVAALLAMARRRVPQEGD

Specific function: Possible Sulfate Transporter. [C]

COG id: COG0659

COG function: function code P; Sulfate permease and related transporters (MFS superfamily)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

Organism=Homo sapiens, GI262206105, Length=434, Percent_Identity=29.2626728110599, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI262206075, Length=434, Percent_Identity=29.2626728110599, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI262206069, Length=434, Percent_Identity=29.2626728110599, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI262206063, Length=434, Percent_Identity=29.2626728110599, Blast_Score=121, Evalue=1e-27,
Organism=Homo sapiens, GI94721257, Length=416, Percent_Identity=25.4807692307692, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI94721255, Length=416, Percent_Identity=25.4807692307692, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI94721253, Length=416, Percent_Identity=25.4807692307692, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI94721259, Length=416, Percent_Identity=25.4807692307692, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI45827800, Length=449, Percent_Identity=23.6080178173719, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI39752683, Length=449, Percent_Identity=23.6080178173719, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI45827802, Length=430, Percent_Identity=23.953488372093, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI269784651, Length=445, Percent_Identity=22.4719101123595, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI47131207, Length=436, Percent_Identity=24.3119266055046, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI20336272, Length=436, Percent_Identity=24.3119266055046, Blast_Score=73, Evalue=5e-13,
Organism=Homo sapiens, GI20336282, Length=374, Percent_Identity=21.6577540106952, Blast_Score=70, Evalue=4e-12,
Organism=Homo sapiens, GI16306483, Length=374, Percent_Identity=21.6577540106952, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI87081859, Length=437, Percent_Identity=40.045766590389, Blast_Score=261, Evalue=9e-71,
Organism=Caenorhabditis elegans, GI17566848, Length=439, Percent_Identity=24.373576309795, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17551690, Length=439, Percent_Identity=22.3234624145786, Blast_Score=84, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI86565215, Length=437, Percent_Identity=23.1121281464531, Blast_Score=78, Evalue=9e-15,
Organism=Caenorhabditis elegans, GI86564196, Length=445, Percent_Identity=22.9213483146067, Blast_Score=74, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI193203292, Length=445, Percent_Identity=21.3483146067416, Blast_Score=66, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17562578, Length=435, Percent_Identity=22.7586206896552, Blast_Score=65, Evalue=5e-11,
Organism=Saccharomyces cerevisiae, GI6325260, Length=425, Percent_Identity=24.4705882352941, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6319771, Length=388, Percent_Identity=24.2268041237113, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI85815873, Length=430, Percent_Identity=27.6744186046512, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24651449, Length=379, Percent_Identity=23.2189973614776, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24649801, Length=438, Percent_Identity=24.8858447488584, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI19922482, Length=407, Percent_Identity=22.6044226044226, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24663084, Length=405, Percent_Identity=25.9259259259259, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21357695, Length=405, Percent_Identity=25.9259259259259, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI21358229, Length=396, Percent_Identity=23.7373737373737, Blast_Score=83, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24666186, Length=291, Percent_Identity=25.4295532646048, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI24647160, Length=163, Percent_Identity=27.6073619631902, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21355087, Length=163, Percent_Identity=27.6073619631902, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645
- InterPro:   IPR001902
- InterPro:   IPR011547 [H]

Pfam domain/function: PF01740 STAS; PF00916 Sulfate_transp [H]

EC number: NA

Molecular weight: Translated: 44170; Mature: 44039

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDGTATSHLFRPKLLTVLSEGYSFSSFRKDVLAAVTVAIVALPLSMAIAVASGVSPERG
CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LYTAIIGGFLVSALGGSRYQIGGPAGAFIVLVAATTTKFGLNGLLVTVMLSGALLTLIGL
HHHHHHHHHHHHHHCCCCEECCCCCCHHEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHH
SRLGSLIRHIPHPVTVGFTCGIAVTIFSGEIRDLFGLHLDGAEPGPLIPKLVGLGNAAST
HHHHHHHHHCCCCCEEEEECCEEEEEECCHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHH
VTPAAAVLGLGCAALIFVVRRFRPNWPGMLIAVVLASIAAAWLQLPAETIGSRFGEIPRG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
LPTPQAPQLSWALVLQLLPSALSFTLLGGVESLLSAKVADSMSGRKHRSNMELVAQGLAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IVSALFGGISVTGTIARTATNIRAGAISPLSGMMHALFVLLFMLVAAPLARYVPLSALAG
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLLVVCWNMAEKAEFLRLIRSWPTALVLLATFGLTLVKDLTFGIVAGCVVAALLAMARRR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPQEGD
CCCCCC
>Mature Secondary Structure 
PDGTATSHLFRPKLLTVLSEGYSFSSFRKDVLAAVTVAIVALPLSMAIAVASGVSPERG
CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCH
LYTAIIGGFLVSALGGSRYQIGGPAGAFIVLVAATTTKFGLNGLLVTVMLSGALLTLIGL
HHHHHHHHHHHHHHCCCCEECCCCCCHHEEEEEHHHHHHCHHHHHHHHHHHHHHHHHHHH
SRLGSLIRHIPHPVTVGFTCGIAVTIFSGEIRDLFGLHLDGAEPGPLIPKLVGLGNAAST
HHHHHHHHHCCCCCEEEEECCEEEEEECCHHHHHHCCCCCCCCCCCCHHHHHCCCCCHHH
VTPAAAVLGLGCAALIFVVRRFRPNWPGMLIAVVLASIAAAWLQLPAETIGSRFGEIPRG
HHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCC
LPTPQAPQLSWALVLQLLPSALSFTLLGGVESLLSAKVADSMSGRKHRSNMELVAQGLAN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
IVSALFGGISVTGTIARTATNIRAGAISPLSGMMHALFVLLFMLVAAPLARYVPLSALAG
HHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
VLLVVCWNMAEKAEFLRLIRSWPTALVLLATFGLTLVKDLTFGIVAGCVVAALLAMARRR
HHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
VPQEGD
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Proton [Periplasm]; SO42- [Periplasm] [C]

Specific reaction: Proton [Periplasm] + SO42- [Periplasm] = Proton [Cytoplasm] + SO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]