Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379190
Identifier: 148379190
GI number: 148379190
Start: 1328129
End: 1328875
Strand: Direct
Name: 148379190
Synonym: CBO1207
Alternate gene names: NA
Gene position: 1328129-1328875 (Clockwise)
Preceding gene: 148379189
Following gene: 148379192
Centisome position: 34.17
GC content: 24.23
Gene sequence:
>747_bases ATGGAAAAAAGTAATAAAATTTGCAAATATCAATTAAAGACTTCTATAAAACCTATATTGATTTATTATAGTATATTAAT AGGATTCTTATTATTAATATTAATAGAAAAATTTACGTCTCAAAACAGCAATGTTCAGTTAAGTGGTATAGAAATGTCAA CGGCAATTTTTATTTTTGTAATGGCATTAAATTCATTTAAATCTTCATTTTATTTTTCTCAAGGAAACAATATTTCAAGA AATAGTTTTATTATTGGAACTATAAAGGCTGGAATAATAATGGCAGCAGCTTTATCTTTAATTGATGTAATTATAAATAG AATATACAATATATTTATAATTTGCCCTACTAACTTTGATATGATCTATACAAAAGCGATATATGGCATAGATGCTGGTT GGGAGCCTATATTAACTCATAGTATTTTCAACTCATTTGGAACCTATATATGGACTTTTGCAGTATATGTATTTTTATTT ATGCTAGGGTTATTAATAACTATAATTTATTTTAGGTTAAATAAACTAGGACAAATAGTATTGTCATTCTTTCCAGTTAT ATTAATTGTAGTTACAAGTGGTTTCTATAGTTATATTCCTACTGGAGTGTGGGAATTTATTGAAAATGCTTTTGGAATTA ATACTAAAAATCCTTATATAGCAATCCTAACATTTATCATATTAAGCATTTTAGCAATAGCAGGACAATATTTATTAATT AAAAAAGCAGTTACAGATAAAAATTAA
Upstream 100 bases:
>100_bases TAAAGAAGATTTAGATAATATAAAGAAACTAGAATTAGAAATTAGCACAGTAGAACTTCAAAAACTATTTATATATTTAA CAAATATGGAGGAAAAATAG
Downstream 100 bases:
>100_bases TATAAAACAATGAATCTAAATTTGCTAATGTGAGAGCATTAAGTTGAATATTGTAAAATAAATAAATTTAAGCTTCAAGG GAGTTAAAACTCTACTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MEKSNKICKYQLKTSIKPILIYYSILIGFLLLILIEKFTSQNSNVQLSGIEMSTAIFIFVMALNSFKSSFYFSQGNNISR NSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFDMIYTKAIYGIDAGWEPILTHSIFNSFGTYIWTFAVYVFLF MLGLLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAILTFIILSILAIAGQYLLI KKAVTDKN
Sequences:
>Translated_248_residues MEKSNKICKYQLKTSIKPILIYYSILIGFLLLILIEKFTSQNSNVQLSGIEMSTAIFIFVMALNSFKSSFYFSQGNNISR NSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFDMIYTKAIYGIDAGWEPILTHSIFNSFGTYIWTFAVYVFLF MLGLLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAILTFIILSILAIAGQYLLI KKAVTDKN >Mature_248_residues MEKSNKICKYQLKTSIKPILIYYSILIGFLLLILIEKFTSQNSNVQLSGIEMSTAIFIFVMALNSFKSSFYFSQGNNISR NSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFDMIYTKAIYGIDAGWEPILTHSIFNSFGTYIWTFAVYVFLF MLGLLITIIYFRLNKLGQIVLSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAILTFIILSILAIAGQYLLI KKAVTDKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28082; Mature: 28082
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKSNKICKYQLKTSIKPILIYYSILIGFLLLILIEKFTSQNSNVQLSGIEMSTAIFIFV CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH MALNSFKSSFYFSQGNNISRNSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFD HHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC MIYTKAIYGIDAGWEPILTHSIFNSFGTYIWTFAVYVFLFMLGLLITIIYFRLNKLGQIV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAILTFIILSILAIAGQYLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH KKAVTDKN HHHHCCCC >Mature Secondary Structure MEKSNKICKYQLKTSIKPILIYYSILIGFLLLILIEKFTSQNSNVQLSGIEMSTAIFIFV CCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHH MALNSFKSSFYFSQGNNISRNSFIIGTIKAGIIMAAALSLIDVIINRIYNIFIICPTNFD HHHHHHHHHEEECCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCC MIYTKAIYGIDAGWEPILTHSIFNSFGTYIWTFAVYVFLFMLGLLITIIYFRLNKLGQIV HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSFFPVILIVVTSGFYSYIPTGVWEFIENAFGINTKNPYIAILTFIILSILAIAGQYLLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHH KKAVTDKN HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA