Definition | Clostridium botulinum A str. ATCC 3502, complete genome. |
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Accession | NC_009495 |
Length | 3,886,916 |
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The map label for this gene is 148379192
Identifier: 148379192
GI number: 148379192
Start: 1329727
End: 1330641
Strand: Direct
Name: 148379192
Synonym: CBO1210
Alternate gene names: NA
Gene position: 1329727-1330641 (Clockwise)
Preceding gene: 148379190
Following gene: 148379193
Centisome position: 34.21
GC content: 32.79
Gene sequence:
>915_bases ATGTCAATGGAAGAAATGAGAGATTGTCACGATAGAAATATGAGTTTTGATAAAGGTCATGGAAATGATTGTCATGAGCA CCATCATAACGAGTGCCATGAGCACCATCATAACGAGTGCCATGAACATTCTCACAACGAGTGCCATGAACATTCTCATA AAGATTGTGGGAAAGTACTAGAAAGTAAAACTGTACCAATGTGTGAAGGAACTAATCTAACACCACAAACAGTAAGAAGA CCAGTGGTAGCTAAGATACCAGTAGTACTCGCAGAAAAAGAGATACAAATAGATGTAGAGTCTAAAACAAGATTAAAAGA AAAATTCTTAGAAATAAAGAGAATAAAAAAAGATGTATTTTTAACTCAATGTGAATTAATACCAAGAGCAGGTGTTATAG AAAATGGTGTTCCTAGAACAGCAAAATTATTTATAAGTGGATTTATTAGAAAAAATATAGAATTTGCTACTGCAGACTGT ATAAAAGATGATGTAGTAAGTGGTGAAATAAAGCATACTACAGAAAAGATACCATTTACTTGCGTAACAGAGGTAAGGTA TATAACTCCTCCGGTATTAGCTAATAGAGAAAGACAGCGAGAAATGGAGTTATTCTGTAGTGAACGTCAGTGTGAACAGG AATGTAATTGTGAAGAGGAAAAACTAGGAAGACTTACTTGTCAAGAATTTTTAGAAGATTCAATAACACTTGTAGAAAAA CCATTCTGTGAATTATTAGGAGCTAGAATATTTGAAGCAGATATACAAAGAAAACCTTGTTTTGAAAAAGGTGTAAAAGT TTTTGATGAATTAGTAGAGAAAATGGTAGTTTTCATTAGAGTAAAAGTTTTACAGTTGCAACAAGTAACTGTAGGTGATC CAAATAACGGTTCAGAAGATGGTTGTAGAAAATAA
Upstream 100 bases:
>100_bases ATCATAATATATAGTATAAGTTATAAAATCAAATTACAAGTAATAATAATCAATCAAATAAGCTTTAAATAAATATTTTA AAACTAGGGAGGAATAAATG
Downstream 100 bases:
>100_bases TACAGAAAATTGCTAATGATAAGATTAATAATAAATAATGCTTAAGATAATTTAGGAGAAAGGATTTCTCCTAAATTATC TAATTTTATATGTGGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRR PVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADC IKDDVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVEK PFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSEDGCRK
Sequences:
>Translated_304_residues MSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRR PVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADC IKDDVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVEK PFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSEDGCRK >Mature_303_residues SMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVLESKTVPMCEGTNLTPQTVRRP VVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVFLTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCI KDDVVSGEIKHTTEKIPFTCVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVEKP FCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSEDGCRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35134; Mature: 35002
Theoretical pI: Translated: 6.26; Mature: 6.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 8.2 %Cys+Met (Translated Protein) 5.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 7.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVL CCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ESKTVPMCEGTNLTPQTVRRPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVF HHCCCCCCCCCCCCHHHHHCCHHHHCCHHEECCEEEEECCHHHHHHHHHHHHHHHHHHHH LTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVSGEIKHTTEKIPFT HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCC CVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVEK EEHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH PFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSED HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC GCRK CCCC >Mature Secondary Structure SMEEMRDCHDRNMSFDKGHGNDCHEHHHNECHEHHHNECHEHSHNECHEHSHKDCGKVL CHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH ESKTVPMCEGTNLTPQTVRRPVVAKIPVVLAEKEIQIDVESKTRLKEKFLEIKRIKKDVF HHCCCCCCCCCCCCHHHHHCCHHHHCCHHEECCEEEEECCHHHHHHHHHHHHHHHHHHHH LTQCELIPRAGVIENGVPRTAKLFISGFIRKNIEFATADCIKDDVVSGEIKHTTEKIPFT HHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHCCCCC CVTEVRYITPPVLANRERQREMELFCSERQCEQECNCEEEKLGRLTCQEFLEDSITLVEK EEHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH PFCELLGARIFEADIQRKPCFEKGVKVFDELVEKMVVFIRVKVLQLQQVTVGDPNNGSED HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCC GCRK CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA