Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
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Accession | NC_009457 |
Length | 3,024,069 |
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The map label for this gene is 147674779
Identifier: 147674779
GI number: 147674779
Start: 1994658
End: 1995428
Strand: Reverse
Name: 147674779
Synonym: VC0395_A1875
Alternate gene names: NA
Gene position: 1995428-1994658 (Counterclockwise)
Preceding gene: 147674154
Following gene: 147675568
Centisome position: 65.98
GC content: 43.19
Gene sequence:
>771_bases TTGGCAAAAAATCGGCCAGAGAACACCATGAAAAAATCGTTTTTAACCTTAGCGCTATTAATGAGTTCCTCCACTTGGGC GGCACAATGTCAGGTGGATATCCAAAATGAAGTGCATCTTAATACTCAACGTATTGAGATCCGGCGTACCAGCAGTGATA AAGCGCTGATCGATAAGCAGAACAATCTTTATATTCAAGGTAAGAGAGTTTCGCTTAACGCAGATCAGCAGGCAGCGGTA CGTCAGTATCGTGAGCAGTTGACCAGTTTACTGCCAAAAGCTCAGCGATGGGCAGACGATAGTTTGAAGCTAGCCAATCA GTTAGTTGACGATGTTGCACTCTCTTTAGAGGCCCCACAAGCGTTTAATAATGTGAAAACCTCTATGGCCACCTTGTTTG CTGAAGCGAAAGCTGAGTACTTTAAAAATGGTGATTTGGTTGTTCCCGCTGAAACGTTTGCTGCAATGCAAACTCGATGG CAACAGAAATTAGCGCAGGGAAAAGAAGTCCTCACGCAGCAATTTTTTACTAGTGCGTTTGATGTGATGGCGAATAAAAT GCAGCAGGAGGGCGGGGTGAATCTTAGCCAGCTTGGTAAAAACATGGCGGATTTAAAAAACAAATTGGACAGCAAGCTAA AAGAACAAAGCTCGACGTTTGAGAAACAAGGACGAGAGTGGTGTGATACGCTGAACAAAATGACGCAACAAGAACAGCAA TTACACAAAAAGATCCCTCAACTAAAGAACTATCAAGTCTTCACCATCTAA
Upstream 100 bases:
>100_bases CCTTTATCAGGGGGGGGATTTGATGAATTGAACAATAAACGGCAGGAAAGTGTCATTTTTGACGTTTTATTGGCGTAGTA TTCATCAGGATTGATTATAG
Downstream 100 bases:
>100_bases ACTGATAAGAGCGTGACCTGCGCTCTTTTGTTCTAAGTAAAGGTTTATTATGACGATGGTGATATGAATTTAAATAACTT TAGCCTACGCTGGCTAACGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MAKNRPENTMKKSFLTLALLMSSSTWAAQCQVDIQNEVHLNTQRIEIRRTSSDKALIDKQNNLYIQGKRVSLNADQQAAV RQYREQLTSLLPKAQRWADDSLKLANQLVDDVALSLEAPQAFNNVKTSMATLFAEAKAEYFKNGDLVVPAETFAAMQTRW QQKLAQGKEVLTQQFFTSAFDVMANKMQQEGGVNLSQLGKNMADLKNKLDSKLKEQSSTFEKQGREWCDTLNKMTQQEQQ LHKKIPQLKNYQVFTI
Sequences:
>Translated_256_residues MAKNRPENTMKKSFLTLALLMSSSTWAAQCQVDIQNEVHLNTQRIEIRRTSSDKALIDKQNNLYIQGKRVSLNADQQAAV RQYREQLTSLLPKAQRWADDSLKLANQLVDDVALSLEAPQAFNNVKTSMATLFAEAKAEYFKNGDLVVPAETFAAMQTRW QQKLAQGKEVLTQQFFTSAFDVMANKMQQEGGVNLSQLGKNMADLKNKLDSKLKEQSSTFEKQGREWCDTLNKMTQQEQQ LHKKIPQLKNYQVFTI >Mature_255_residues AKNRPENTMKKSFLTLALLMSSSTWAAQCQVDIQNEVHLNTQRIEIRRTSSDKALIDKQNNLYIQGKRVSLNADQQAAVR QYREQLTSLLPKAQRWADDSLKLANQLVDDVALSLEAPQAFNNVKTSMATLFAEAKAEYFKNGDLVVPAETFAAMQTRWQ QKLAQGKEVLTQQFFTSAFDVMANKMQQEGGVNLSQLGKNMADLKNKLDSKLKEQSSTFEKQGREWCDTLNKMTQQEQQL HKKIPQLKNYQVFTI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29197; Mature: 29065
Theoretical pI: Translated: 9.88; Mature: 9.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKNRPENTMKKSFLTLALLMSSSTWAAQCQVDIQNEVHLNTQRIEIRRTSSDKALIDKQ CCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCHHEEEEEECCCCCHHHCCC NNLYIQGKRVSLNADQQAAVRQYREQLTSLLPKAQRWADDSLKLANQLVDDVALSLEAPQ CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH AFNNVKTSMATLFAEAKAEYFKNGDLVVPAETFAAMQTRWQQKLAQGKEVLTQQFFTSAF HHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVMANKMQQEGGVNLSQLGKNMADLKNKLDSKLKEQSSTFEKQGREWCDTLNKMTQQEQQ HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHKKIPQLKNYQVFTI HHHHCCHHCCCEEEEC >Mature Secondary Structure AKNRPENTMKKSFLTLALLMSSSTWAAQCQVDIQNEVHLNTQRIEIRRTSSDKALIDKQ CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCEECCHHEEEEEECCCCCHHHCCC NNLYIQGKRVSLNADQQAAVRQYREQLTSLLPKAQRWADDSLKLANQLVDDVALSLEAPQ CCEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCH AFNNVKTSMATLFAEAKAEYFKNGDLVVPAETFAAMQTRWQQKLAQGKEVLTQQFFTSAF HHHHHHHHHHHHHHHHHHHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DVMANKMQQEGGVNLSQLGKNMADLKNKLDSKLKEQSSTFEKQGREWCDTLNKMTQQEQQ HHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHKKIPQLKNYQVFTI HHHHCCHHCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA