| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147673477
Identifier: 147673477
GI number: 147673477
Start: 355973
End: 356488
Strand: Direct
Name: 147673477
Synonym: VC0395_A0335
Alternate gene names: NA
Gene position: 355973-356488 (Clockwise)
Preceding gene: 147674081
Following gene: 147674822
Centisome position: 11.77
GC content: 34.5
Gene sequence:
>516_bases TTGAATATGAATAGAGCACATGGGTTTTTCCTCTTTTTACTCTCAATTCCTACCGCCATCATTTCAGCTTTGACTTTTGA ACAACAAGGTGGATTCATTATTGGTGGATGGTTTGTAATAGCTCTTGCGCTCTCTGGAATGGGTGCAATTAAACAATTTA TAAAAGAGCGCAATAACCAATATGGAATCACAACTGGTGTCGTGGTCGGATTTGAAGTAACTGTTAAATACAATAGAAAT ATCGAGGAGCGTTTTAGAAAGAAAAAATTTCTCAATCCTCAGGTTGAATATACTTGGAATGGTCAGGTTTACACTCAATC ATTATTAGTAACTTACGATGCTACTTTACATCGTATTGTTGGTAAGAAACTAGGAGAGAAAGTTGTTTTGCGTGTTCCAT TAAATGAACCTCAAAACGCAAGAGAGAATACATTTATTTCCAAGTATATCTATCTAATAATTAGTGTCTGTGCTGGTTTT CTTTCTTTGTTAATATTGTTTTTGTTGGCTTTCTAG
Upstream 100 bases:
>100_bases TGACTGGGGTGAACGAGCGTAGCCAACACCGCTGCAGCTTCAAGTAGGAAGGGTATAAACAAAATAAATATTAAGTTTGG CATTATATTTTTCTGGATGA
Downstream 100 bases:
>100_bases TATGAACCACACTAAATAATATCAACATAATACGCCATGCCCTGTTGATTAAGCAGGGCACTATTTTATATCAATCATGA AATATACACTATGCTGTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNMNRAHGFFLFLLSIPTAIISALTFEQQGGFIIGGWFVIALALSGMGAIKQFIKERNNQYGITTGVVVGFEVTVKYNRN IEERFRKKKFLNPQVEYTWNGQVYTQSLLVTYDATLHRIVGKKLGEKVVLRVPLNEPQNARENTFISKYIYLIISVCAGF LSLLILFLLAF
Sequences:
>Translated_171_residues MNMNRAHGFFLFLLSIPTAIISALTFEQQGGFIIGGWFVIALALSGMGAIKQFIKERNNQYGITTGVVVGFEVTVKYNRN IEERFRKKKFLNPQVEYTWNGQVYTQSLLVTYDATLHRIVGKKLGEKVVLRVPLNEPQNARENTFISKYIYLIISVCAGF LSLLILFLLAF >Mature_171_residues MNMNRAHGFFLFLLSIPTAIISALTFEQQGGFIIGGWFVIALALSGMGAIKQFIKERNNQYGITTGVVVGFEVTVKYNRN IEERFRKKKFLNPQVEYTWNGQVYTQSLLVTYDATLHRIVGKKLGEKVVLRVPLNEPQNARENTFISKYIYLIISVCAGF LSLLILFLLAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19433; Mature: 19433
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMNRAHGFFLFLLSIPTAIISALTFEQQGGFIIGGWFVIALALSGMGAIKQFIKERNNQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHCCCC YGITTGVVVGFEVTVKYNRNIEERFRKKKFLNPQVEYTWNGQVYTQSLLVTYDATLHRIV CCCEEEEEEEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCEEEEHHEEEHHHHHHHHHH GKKLGEKVVLRVPLNEPQNARENTFISKYIYLIISVCAGFLSLLILFLLAF HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNMNRAHGFFLFLLSIPTAIISALTFEQQGGFIIGGWFVIALALSGMGAIKQFIKERNNQ CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCHHHHHHHHHHCCCC YGITTGVVVGFEVTVKYNRNIEERFRKKKFLNPQVEYTWNGQVYTQSLLVTYDATLHRIV CCCEEEEEEEEEEEEEECCCHHHHHHHHHCCCCCEEEEECCEEEEHHEEEHHHHHHHHHH GKKLGEKVVLRVPLNEPQNARENTFISKYIYLIISVCAGFLSLLILFLLAF HHHCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA