| Definition | Vibrio cholerae O395 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_009457 |
| Length | 3,024,069 |
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The map label for this gene is 147674081
Identifier: 147674081
GI number: 147674081
Start: 354012
End: 355781
Strand: Direct
Name: 147674081
Synonym: VC0395_A0334
Alternate gene names: NA
Gene position: 354012-355781 (Clockwise)
Preceding gene: 147673362
Following gene: 147673477
Centisome position: 11.71
GC content: 48.64
Gene sequence:
>1770_bases TTGAACCATCGGGATTCGATAGGCAAAGTGCAATTCATCTTGAGCTATCTCTACTCTAGAAAGCCAAACAACTTTGAAAT GGAACTGCCCATGCCTAGCCACTCCTCGTTTTTAGATATTTCAGCGCTGTTTGAACAGTGTGAACAGAGTTCACTACTGA AAGGTGCACAACTCGCGAAAAGTGGCTCGGTACGCAAGCTCACCATCACTGGGCATACCGTCAACGCAGAAGTGAAAGGC TCTCAACTTTATCGCGTACAACTTACTGGCGGTCAAGCTTCCTCTAGCCGCTGCACTTGCCCTGCGGCGGGCCATCAAGC CGTATGCAAGCACGCCGTGGCTGTTGCCCTCTGCTTACTCGATCAGCAATCACAGAATGAAGACGGTGAACGTGAGCAGA TCCGCCGTTATCTAAGCACATTAAGCGAAGAGGCGAGGCTCGAGATGTTACTTGATTATCTCGAGCGAGATAAGTCGGTT TGGCAAGCCTTACTGGCGAAAGAACAACCCAAAGATCAGAGCCTCAGTTATAACGAGCTGAAGAAAAAAATTACCCAAGC GCTCCCTCGTAAACAGCTTTGGGATTGGGGGGACGTGAGCGATTACTTTGCACAGGCCGAAGAGCAGCTCGACTGGGTAT TTGATGTTGCGATGCAACTTGCAACCGATCAGCAGTGGAAACTGATCCAGCACACAGTCACTCGTTTGAACAGCGTGTTA GAGCAGATTGATGACTCCAACGGTGAACGTTTTGGAGTCGAAGCGCTGATCAATGTTCAGATGCCGATGATTTTGAACCG ATTGGAGTGGAGTGAGGAAGAGAAAGCGCAGTGGATGTTTGAGCGCATGACCCACCATGAGTTTGATGTGTATCCCTCAA TTGAAACCGACTTCGCGATCGTTTGGCGCAGCAACCCAACATTTTTACACTTGTGTCGCAAAGCCATTGAGAACACACCA CTAAACCGTGAAAACGCGTGGGATCTCAAAACGTGGGCCGCACCACTACTGGCCATGGCAGCGGATTGGCATGAAGTTAT CGCCATTAAGCAAAAAATCGCGTGGCGCTGCGATGATTTTCTGGACATAGTGCAGCTCTACCTTGAGCACCAAGAGCCAC ATCAAGCGGAATTCTGGTTAGCTAAAGCCAAAAAGCACGCGACCCCTTATGAAAAGCAGCAGTGCGAGCAACTGCAGGTC AACCTCTACCTCTGTTTGGGGCAAATGACTCAAGCGTGGCAGTTGGCGAACCGACTTTTCACTGAGAATCCCTCCTTTGA TAGTTACCAAAAGCTGAGTGCGTTCAAAACCACACACCAAATTGAAGATGCGGAGTTTTTAGCGCGTATCGAACAGAGCT TGATCGCCTGCTATCAACCCGCTGATGCACGAGGATTTATCAGCCGCAACAGTAGTGATGTGGTCGAATTTTATATCGAG CAGCAAGCGTGGAAAAAAGCCTGTGATTGGGTAGCCAATCGAGCCACCGAAAGTCAGGTACTACTCAGGTTGGCCGATCA CATTATTGCCAACCAACCTCAGATCTCGTTGCAGTACTACCTTCGCGTGGCGCGCGCTTCAATTGAACAAACCAGCAACC AAGGTTATCAAAATGCGATTCACCATCTACAACGTATCGAGCGTTTATTAGCCAAAAATCCCACCGTGTTGGCCGATTTT TATCTCGAAATCACCGCTCTGGCAGAAGCCTACAAACGTAAGCGAAATATGCATAACTTATTGAAAAAACACTATCCCAA GCAGGTTTAG
Upstream 100 bases:
>100_bases ATACGAATGAAGCGGTTTGACTCAAGCCCATTGATGGCGGCTCGTTGGGTTAATTGTAAGCAGGTGTTGGGCAGTAAAGC TAAAAATTGCATAGAGTGAC
Downstream 100 bases:
>100_bases TGGTTCTCTTCTGGTTGCTATTATACCCAAACAACTTGGAGTGCAGGTAGGCGGCAAGTAAGTGAATCCTCATGAGCATA GGCAAACTATGTGACTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 589; Mature: 589
Protein sequence:
>589_residues MNHRDSIGKVQFILSYLYSRKPNNFEMELPMPSHSSFLDISALFEQCEQSSLLKGAQLAKSGSVRKLTITGHTVNAEVKG SQLYRVQLTGGQASSSRCTCPAAGHQAVCKHAVAVALCLLDQQSQNEDGEREQIRRYLSTLSEEARLEMLLDYLERDKSV WQALLAKEQPKDQSLSYNELKKKITQALPRKQLWDWGDVSDYFAQAEEQLDWVFDVAMQLATDQQWKLIQHTVTRLNSVL EQIDDSNGERFGVEALINVQMPMILNRLEWSEEEKAQWMFERMTHHEFDVYPSIETDFAIVWRSNPTFLHLCRKAIENTP LNRENAWDLKTWAAPLLAMAADWHEVIAIKQKIAWRCDDFLDIVQLYLEHQEPHQAEFWLAKAKKHATPYEKQQCEQLQV NLYLCLGQMTQAWQLANRLFTENPSFDSYQKLSAFKTTHQIEDAEFLARIEQSLIACYQPADARGFISRNSSDVVEFYIE QQAWKKACDWVANRATESQVLLRLADHIIANQPQISLQYYLRVARASIEQTSNQGYQNAIHHLQRIERLLAKNPTVLADF YLEITALAEAYKRKRNMHNLLKKHYPKQV
Sequences:
>Translated_589_residues MNHRDSIGKVQFILSYLYSRKPNNFEMELPMPSHSSFLDISALFEQCEQSSLLKGAQLAKSGSVRKLTITGHTVNAEVKG SQLYRVQLTGGQASSSRCTCPAAGHQAVCKHAVAVALCLLDQQSQNEDGEREQIRRYLSTLSEEARLEMLLDYLERDKSV WQALLAKEQPKDQSLSYNELKKKITQALPRKQLWDWGDVSDYFAQAEEQLDWVFDVAMQLATDQQWKLIQHTVTRLNSVL EQIDDSNGERFGVEALINVQMPMILNRLEWSEEEKAQWMFERMTHHEFDVYPSIETDFAIVWRSNPTFLHLCRKAIENTP LNRENAWDLKTWAAPLLAMAADWHEVIAIKQKIAWRCDDFLDIVQLYLEHQEPHQAEFWLAKAKKHATPYEKQQCEQLQV NLYLCLGQMTQAWQLANRLFTENPSFDSYQKLSAFKTTHQIEDAEFLARIEQSLIACYQPADARGFISRNSSDVVEFYIE QQAWKKACDWVANRATESQVLLRLADHIIANQPQISLQYYLRVARASIEQTSNQGYQNAIHHLQRIERLLAKNPTVLADF YLEITALAEAYKRKRNMHNLLKKHYPKQV >Mature_589_residues MNHRDSIGKVQFILSYLYSRKPNNFEMELPMPSHSSFLDISALFEQCEQSSLLKGAQLAKSGSVRKLTITGHTVNAEVKG SQLYRVQLTGGQASSSRCTCPAAGHQAVCKHAVAVALCLLDQQSQNEDGEREQIRRYLSTLSEEARLEMLLDYLERDKSV WQALLAKEQPKDQSLSYNELKKKITQALPRKQLWDWGDVSDYFAQAEEQLDWVFDVAMQLATDQQWKLIQHTVTRLNSVL EQIDDSNGERFGVEALINVQMPMILNRLEWSEEEKAQWMFERMTHHEFDVYPSIETDFAIVWRSNPTFLHLCRKAIENTP LNRENAWDLKTWAAPLLAMAADWHEVIAIKQKIAWRCDDFLDIVQLYLEHQEPHQAEFWLAKAKKHATPYEKQQCEQLQV NLYLCLGQMTQAWQLANRLFTENPSFDSYQKLSAFKTTHQIEDAEFLARIEQSLIACYQPADARGFISRNSSDVVEFYIE QQAWKKACDWVANRATESQVLLRLADHIIANQPQISLQYYLRVARASIEQTSNQGYQNAIHHLQRIERLLAKNPTVLADF YLEITALAEAYKRKRNMHNLLKKHYPKQV
Specific function: Unknown
COG id: COG4715
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68299; Mature: 68299
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS50966 ZF_SWIM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHRDSIGKVQFILSYLYSRKPNNFEMELPMPSHSSFLDISALFEQCEQSSLLKGAQLAK CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC SGSVRKLTITGHTVNAEVKGSQLYRVQLTGGQASSSRCTCPAAGHQAVCKHAVAVALCLL CCCEEEEEEECCEEECEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DQQSQNEDGEREQIRRYLSTLSEEARLEMLLDYLERDKSVWQALLAKEQPKDQSLSYNEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KKKITQALPRKQLWDWGDVSDYFAQAEEQLDWVFDVAMQLATDQQWKLIQHTVTRLNSVL HHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EQIDDSNGERFGVEALINVQMPMILNRLEWSEEEKAQWMFERMTHHEFDVYPSIETDFAI HHHCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEE VWRSNPTFLHLCRKAIENTPLNRENAWDLKTWAAPLLAMAADWHEVIAIKQKIAWRCDDF EECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDIVQLYLEHQEPHQAEFWLAKAKKHATPYEKQQCEQLQVNLYLCLGQMTQAWQLANRLF HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TENPSFDSYQKLSAFKTTHQIEDAEFLARIEQSLIACYQPADARGFISRNSSDVVEFYIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHH QQAWKKACDWVANRATESQVLLRLADHIIANQPQISLQYYLRVARASIEQTSNQGYQNAI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH HHLQRIERLLAKNPTVLADFYLEITALAEAYKRKRNMHNLLKKHYPKQV HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MNHRDSIGKVQFILSYLYSRKPNNFEMELPMPSHSSFLDISALFEQCEQSSLLKGAQLAK CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC SGSVRKLTITGHTVNAEVKGSQLYRVQLTGGQASSSRCTCPAAGHQAVCKHAVAVALCLL CCCEEEEEEECCEEECEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH DQQSQNEDGEREQIRRYLSTLSEEARLEMLLDYLERDKSVWQALLAKEQPKDQSLSYNEL CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH KKKITQALPRKQLWDWGDVSDYFAQAEEQLDWVFDVAMQLATDQQWKLIQHTVTRLNSVL HHHHHHHCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH EQIDDSNGERFGVEALINVQMPMILNRLEWSEEEKAQWMFERMTHHEFDVYPSIETDFAI HHHCCCCCCEECHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEE VWRSNPTFLHLCRKAIENTPLNRENAWDLKTWAAPLLAMAADWHEVIAIKQKIAWRCDDF EECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LDIVQLYLEHQEPHQAEFWLAKAKKHATPYEKQQCEQLQVNLYLCLGQMTQAWQLANRLF HHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TENPSFDSYQKLSAFKTTHQIEDAEFLARIEQSLIACYQPADARGFISRNSSDVVEFYIE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHH QQAWKKACDWVANRATESQVLLRLADHIIANQPQISLQYYLRVARASIEQTSNQGYQNAI HHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH HHLQRIERLLAKNPTVLADFYLEITALAEAYKRKRNMHNLLKKHYPKQV HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA