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The map label for this gene is rfaB [C]

Identifier: 146343793

GI number: 146343793

Start: 7350271

End: 7351431

Strand: Reverse

Name: rfaB [C]

Synonym: BRADO7042

Alternate gene names: 146343793

Gene position: 7351431-7350271 (Counterclockwise)

Preceding gene: 146343794

Following gene: 146343792

Centisome position: 98.59

GC content: 63.39

Gene sequence:

>1161_bases
ATGAAGATCCTCGTCGCGCACAACCAGTATCAGGGCCGCGGCGGAGAGGATGTCGTCTTCGACGCGGAAACGGCGCTACT
GCGTGAGGCCGGCCACCAGGTCGAGACGCTGACTGTCAGTAATCATGCGATCAACTCGCTGGCATCGCGCGTCGCGGCAA
CGCTTTCCGTGGTCGATAGCCGGTTCGGCCGGCAGGCGATCGGGGAGGCGATCGAACGCCATCGACCTGACGTGGTTCAT
GTCCACAATTTCTTCCCTCGACTGTCACCCGCGATTTTCGATGTTTGTCGTCAATTCGGTGTGCCCGCCGTCGCGACGCT
GCATAACTACCGGACGATCTGCTCCGGCGGCATGCTGTTGCGGAACGGCCGCGTATGTCATGAATGTCTCGATGCGGGCG
ATCAGATCAGAGGCATCATTCACCGCTGCTATCGGGCATCATACGTAGGATCGGCCGCGTCGGCCTGGATGATCACGAGT
CACAAGCGACGCGGCACCTGGACGCGGCCGGGCATCAGGTTCATTGCGTTGACTGAGTTCGCGCGTGATCTCTTTGCAAG
GTCGGGCTTTGATGCCGATACCATCGACGTGAAGCCGAACTTTCTGCCCGATCCTGGGGAGCCAGACGGGGCGGCACGCC
GCGAGGGTCTCTTGTTCGTCGGCCGGCTCAGCCCGGAGAAGGGCGTCGATGATCTGATCTGCGCGGCCGCAACCGCCGGC
GTGCCCCTGCGGATCGCAGGAGGAGGACCGGAGCACGAACGGCTTCGCCGAGAGGCTGGTCCGAACGTCACATTCCTCGG
CGAGATCTCTCGGACGGAGGTCTTGCGAGAAATGTCCACCACGCGAGCGCTGGTGGTGCCATCGCGCTGGTACGAGGGAT
TTCCGATGGTCGTCGTGGAAGCTTTTGCGCGCGGCACCCCGGTCCTCGCATCGCGCCTCGGGGCGCTGGCCGAAATCATC
AGGGACAGAGAAACCGGTGCTCTCAACCCGCCGGGCAACATAGCGGCGCTTGCGTCGAACATCGCAGAGTTCGCGGGCGA
TCATGCGCTCGCCGACCGTTGCGGTCGCTCCGCGCGGCAAACCTATCTGAGCCGGTACACGCCGCACGCCAATCTGCGTC
TGCTCGAGGCGATCTATCGGCGTGCCCAGCACTCATCGTAG

Upstream 100 bases:

>100_bases
GCCACAAGGTTCCTTCGACCACGCTGATAGGCTCTGGTGTGCTGCGAGCCGGCACGAGCCTCGTCACCGAATTGAGCTGG
TCGGCAGATTTCCGCGTCGC

Downstream 100 bases:

>100_bases
GTACGGCTTAGCCTGCAGTTGGCGGAGACAATACTCCAGCTGTCGGCGACCTTCGTCGAATGTTAGATTTAACATTTCCA
GAGCGCAGAGATTTCTCGTC

Product: putative glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKILVAHNQYQGRGGEDVVFDAETALLREAGHQVETLTVSNHAINSLASRVAATLSVVDSRFGRQAIGEAIERHRPDVVH
VHNFFPRLSPAIFDVCRQFGVPAVATLHNYRTICSGGMLLRNGRVCHECLDAGDQIRGIIHRCYRASYVGSAASAWMITS
HKRRGTWTRPGIRFIALTEFARDLFARSGFDADTIDVKPNFLPDPGEPDGAARREGLLFVGRLSPEKGVDDLICAAATAG
VPLRIAGGGPEHERLRREAGPNVTFLGEISRTEVLREMSTTRALVVPSRWYEGFPMVVVEAFARGTPVLASRLGALAEII
RDRETGALNPPGNIAALASNIAEFAGDHALADRCGRSARQTYLSRYTPHANLRLLEAIYRRAQHSS

Sequences:

>Translated_386_residues
MKILVAHNQYQGRGGEDVVFDAETALLREAGHQVETLTVSNHAINSLASRVAATLSVVDSRFGRQAIGEAIERHRPDVVH
VHNFFPRLSPAIFDVCRQFGVPAVATLHNYRTICSGGMLLRNGRVCHECLDAGDQIRGIIHRCYRASYVGSAASAWMITS
HKRRGTWTRPGIRFIALTEFARDLFARSGFDADTIDVKPNFLPDPGEPDGAARREGLLFVGRLSPEKGVDDLICAAATAG
VPLRIAGGGPEHERLRREAGPNVTFLGEISRTEVLREMSTTRALVVPSRWYEGFPMVVVEAFARGTPVLASRLGALAEII
RDRETGALNPPGNIAALASNIAEFAGDHALADRCGRSARQTYLSRYTPHANLRLLEAIYRRAQHSS
>Mature_386_residues
MKILVAHNQYQGRGGEDVVFDAETALLREAGHQVETLTVSNHAINSLASRVAATLSVVDSRFGRQAIGEAIERHRPDVVH
VHNFFPRLSPAIFDVCRQFGVPAVATLHNYRTICSGGMLLRNGRVCHECLDAGDQIRGIIHRCYRASYVGSAASAWMITS
HKRRGTWTRPGIRFIALTEFARDLFARSGFDADTIDVKPNFLPDPGEPDGAARREGLLFVGRLSPEKGVDDLICAAATAG
VPLRIAGGGPEHERLRREAGPNVTFLGEISRTEVLREMSTTRALVVPSRWYEGFPMVVVEAFARGTPVLASRLGALAEII
RDRETGALNPPGNIAALASNIAEFAGDHALADRCGRSARQTYLSRYTPHANLRLLEAIYRRAQHSS

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 42221; Mature: 42221

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILVAHNQYQGRGGEDVVFDAETALLREAGHQVETLTVSNHAINSLASRVAATLSVVDS
CEEEEECCCCCCCCCCEEEECHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
RFGRQAIGEAIERHRPDVVHVHNFFPRLSPAIFDVCRQFGVPAVATLHNYRTICSGGMLL
HHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
RNGRVCHECLDAGDQIRGIIHRCYRASYVGSAASAWMITSHKRRGTWTRPGIRFIALTEF
ECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCEEEHHHHHH
ARDLFARSGFDADTIDVKPNFLPDPGEPDGAARREGLLFVGRLSPEKGVDDLICAAATAG
HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHCC
VPLRIAGGGPEHERLRREAGPNVTFLGEISRTEVLREMSTTRALVVPSRWYEGFPMVVVE
CCEEECCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCEEEECHHHHCCCHHHHHH
AFARGTPVLASRLGALAEIIRDRETGALNPPGNIAALASNIAEFAGDHALADRCGRSARQ
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCHHHHH
TYLSRYTPHANLRLLEAIYRRAQHSS
HHHHHCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKILVAHNQYQGRGGEDVVFDAETALLREAGHQVETLTVSNHAINSLASRVAATLSVVDS
CEEEEECCCCCCCCCCEEEECHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHHHHHHHHH
RFGRQAIGEAIERHRPDVVHVHNFFPRLSPAIFDVCRQFGVPAVATLHNYRTICSGGMLL
HHHHHHHHHHHHHCCCCEEEHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEE
RNGRVCHECLDAGDQIRGIIHRCYRASYVGSAASAWMITSHKRRGTWTRPGIRFIALTEF
ECCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHEEECCCCCCCCCCCCEEEHHHHHH
ARDLFARSGFDADTIDVKPNFLPDPGEPDGAARREGLLFVGRLSPEKGVDDLICAAATAG
HHHHHHHCCCCCCEEECCCCCCCCCCCCCCCHHHCCEEEEECCCCCCCHHHHHHHHHHCC
VPLRIAGGGPEHERLRREAGPNVTFLGEISRTEVLREMSTTRALVVPSRWYEGFPMVVVE
CCEEECCCCCHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCEEEECHHHHCCCHHHHHH
AFARGTPVLASRLGALAEIIRDRETGALNPPGNIAALASNIAEFAGDHALADRCGRSARQ
HHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHCHHHHH
TYLSRYTPHANLRLLEAIYRRAQHSS
HHHHHCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]