| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146343794
Identifier: 146343794
GI number: 146343794
Start: 7351428
End: 7353404
Strand: Reverse
Name: 146343794
Synonym: BRADO7043
Alternate gene names: NA
Gene position: 7353404-7351428 (Counterclockwise)
Preceding gene: 146343795
Following gene: 146343793
Centisome position: 98.62
GC content: 64.64
Gene sequence:
>1977_bases ATGAATCCGGGCTGGTACCTCCGCCGGCTCATCCGCATGGAGCTGTCCGAGCTCAGCGGCCGCGTTCAGGATCAGCTCTG GCGCCTTTTTTGGCGCCTGCAAGCCCCGGATATCGCTCGCCTGGCGCGTCGAGACGCCCGGCCGAACGGCGTTCGACTCA AGGCCTTGCCTTCTGCGTCCATGGTGCCCGCGGCGGCCGCCGCGCGCCTGCTGCAGCGTGCGGATCGTGTCCTTGATGGT GAATGGGAGATCTTCGGCACTCGTCATCCGGCGCTCGGTGACGATCCGGACTGGTTCATCGATGCCCGCAGCGGAAGACG GGCGCCGTCGTCCGACTACGCGTTCGCGATTGCGTATCGCGATGCGGGGAGACATGGCGATATCAAGTTCATCTGGGAGC CGGCGCGCCTCCACCATCTGACCGTGCTGTCGGCAGCCTTCGCCCTGTCGGGCGACGAGCGTTACGCCATGCGGGTTGCC GGACATTTGCGCAGTTGGTGGCACCAGAATCTATTCCTGCATGGGCCGCATTGGATCAGCGGCATCGAAATCGGGCTGCG CCTGATTGCTTTCGTGTGGATTCGGCAACTGCTCTCCGCCTGGCCAGGAGCCGGCGATCTGTTTGAAGGCAATGCCGAGT TCATTGACCAGCTCTATGCGCATCAACTCTGGCTGTCGCGTTTTCCCAGCCGGGGATCGTCGGCCAATAATCATCTGATC GCAGAGGCCGCCGGCCAATTTGTCGCGAGCTGTGCGTTTCCGCTCTTCCGGCAGAGCGGCCGCTGGCGTGTGGCGGCCGC CGAGACGCTGGCCCGGGAGGCGGTGATACAGACATTCCCCTGCGGCGCCAATCGAGAGCTGGCGTCCGATTATCATGGCT TCGTTCTCGAACTGCTTTTGATCGCCGCCATTCAGGGGGAAGCTGCGGGCCATCCGGTTGCACCGGAAGTTTGGCGTGCA ATCGAGCTAATGACCGACGCCGTGGCGAGCATGATCGACCCGGCCGGGCACGCGCCACGCCAGGGGGACAGCGACGAAGG GATCGGACTTCTCGTCGATGATCCCGCCGGGAATCGCTGGCTTGGCCTGATCGAGACTGGTGCACGCCTGTTCGGGCGGC CTTCTTGGTGGCCTGCTGAAGCGGCAGATGATGTCCGGAGCGTCCTGCTGACTCATGATCTGTGGTGCCGTCCGCGTCAG GCCGATGATGCCGGTCGTGCTCGGCGGCTGTTTCCGGACGCTGGTCAGGCCTATCTGGTCAGCAGCCGCAGCGGATTCTG GGCTCGTTGCGACCACGGTCCGCTTGGGTTCGGCCGGATCGCAGCGCATGGCCATGCCGATGCGCTCTCGATTGAATGCC GGATCGGCGGTGTCGATGTCCTCGCCGATCCTGGCACCTATTGCTACCACTCCGAGCCGCGCTGGCGCGACTACTTCCGA TCGACGCTGGGGCACAACACGTTGCAGGCCTTTGGACACGACCAATCGAGGTCCGGTGGTCCGTTCTTGTGGACGCAGCA TGCGCGCAGTCGGCTGGTCGCGATGGAGGGGCTGGACGACGAGTCCTTCGATGCACTTTGGACGGCGGAACATTTCGGCT ATCGGCCGCTGGTTCATCGACGCAGCGTACGTCTGATGCGCAAGGGGTCAAAGCTCGAGGTGACCGACACTCTCCTGGAG AGCGGCGAGTTGCCGATCCCCGTGGCGCTCTGCTGGCACCTGGGTCCCGCTGTCGGTTGCGAGCTCGGTGCGGATCGAGC GACGCTCACCTGGTCCGGAGGACGAGGCGAGCTTGCGTTGCCGTCGCAGCTTGCCTGGCGGAGCCATCACGGCGACGAAG CGTTGCCGGCCGGCTGGTACTCGCCGGCCTTCGGCCACAAGGTTCCTTCGACCACGCTGATAGGCTCTGGTGTGCTGCGA GCCGGCACGAGCCTCGTCACCGAATTGAGCTGGTCGGCAGATTTCCGCGTCGCATGA
Upstream 100 bases:
>100_bases CTCTGGCGGTCCAGGAGAGCGCCGCCACGGGGCTTCTCGTCGATCTCAGATCGGCGACCCCGCCGGAAATTGAGAACGAA CTCTCGGCGTCGGCGATCCC
Downstream 100 bases:
>100_bases AGATCCTCGTCGCGCACAACCAGTATCAGGGCCGCGGCGGAGAGGATGTCGTCTTCGACGCGGAAACGGCGCTACTGCGT GAGGCCGGCCACCAGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Heparinase II/III-Like Protein; Cytoplasmic Protein; Heparinase II/III-Like
Number of amino acids: Translated: 658; Mature: 658
Protein sequence:
>658_residues MNPGWYLRRLIRMELSELSGRVQDQLWRLFWRLQAPDIARLARRDARPNGVRLKALPSASMVPAAAAARLLQRADRVLDG EWEIFGTRHPALGDDPDWFIDARSGRRAPSSDYAFAIAYRDAGRHGDIKFIWEPARLHHLTVLSAAFALSGDERYAMRVA GHLRSWWHQNLFLHGPHWISGIEIGLRLIAFVWIRQLLSAWPGAGDLFEGNAEFIDQLYAHQLWLSRFPSRGSSANNHLI AEAAGQFVASCAFPLFRQSGRWRVAAAETLAREAVIQTFPCGANRELASDYHGFVLELLLIAAIQGEAAGHPVAPEVWRA IELMTDAVASMIDPAGHAPRQGDSDEGIGLLVDDPAGNRWLGLIETGARLFGRPSWWPAEAADDVRSVLLTHDLWCRPRQ ADDAGRARRLFPDAGQAYLVSSRSGFWARCDHGPLGFGRIAAHGHADALSIECRIGGVDVLADPGTYCYHSEPRWRDYFR STLGHNTLQAFGHDQSRSGGPFLWTQHARSRLVAMEGLDDESFDALWTAEHFGYRPLVHRRSVRLMRKGSKLEVTDTLLE SGELPIPVALCWHLGPAVGCELGADRATLTWSGGRGELALPSQLAWRSHHGDEALPAGWYSPAFGHKVPSTTLIGSGVLR AGTSLVTELSWSADFRVA
Sequences:
>Translated_658_residues MNPGWYLRRLIRMELSELSGRVQDQLWRLFWRLQAPDIARLARRDARPNGVRLKALPSASMVPAAAAARLLQRADRVLDG EWEIFGTRHPALGDDPDWFIDARSGRRAPSSDYAFAIAYRDAGRHGDIKFIWEPARLHHLTVLSAAFALSGDERYAMRVA GHLRSWWHQNLFLHGPHWISGIEIGLRLIAFVWIRQLLSAWPGAGDLFEGNAEFIDQLYAHQLWLSRFPSRGSSANNHLI AEAAGQFVASCAFPLFRQSGRWRVAAAETLAREAVIQTFPCGANRELASDYHGFVLELLLIAAIQGEAAGHPVAPEVWRA IELMTDAVASMIDPAGHAPRQGDSDEGIGLLVDDPAGNRWLGLIETGARLFGRPSWWPAEAADDVRSVLLTHDLWCRPRQ ADDAGRARRLFPDAGQAYLVSSRSGFWARCDHGPLGFGRIAAHGHADALSIECRIGGVDVLADPGTYCYHSEPRWRDYFR STLGHNTLQAFGHDQSRSGGPFLWTQHARSRLVAMEGLDDESFDALWTAEHFGYRPLVHRRSVRLMRKGSKLEVTDTLLE SGELPIPVALCWHLGPAVGCELGADRATLTWSGGRGELALPSQLAWRSHHGDEALPAGWYSPAFGHKVPSTTLIGSGVLR AGTSLVTELSWSADFRVA >Mature_658_residues MNPGWYLRRLIRMELSELSGRVQDQLWRLFWRLQAPDIARLARRDARPNGVRLKALPSASMVPAAAAARLLQRADRVLDG EWEIFGTRHPALGDDPDWFIDARSGRRAPSSDYAFAIAYRDAGRHGDIKFIWEPARLHHLTVLSAAFALSGDERYAMRVA GHLRSWWHQNLFLHGPHWISGIEIGLRLIAFVWIRQLLSAWPGAGDLFEGNAEFIDQLYAHQLWLSRFPSRGSSANNHLI AEAAGQFVASCAFPLFRQSGRWRVAAAETLAREAVIQTFPCGANRELASDYHGFVLELLLIAAIQGEAAGHPVAPEVWRA IELMTDAVASMIDPAGHAPRQGDSDEGIGLLVDDPAGNRWLGLIETGARLFGRPSWWPAEAADDVRSVLLTHDLWCRPRQ ADDAGRARRLFPDAGQAYLVSSRSGFWARCDHGPLGFGRIAAHGHADALSIECRIGGVDVLADPGTYCYHSEPRWRDYFR STLGHNTLQAFGHDQSRSGGPFLWTQHARSRLVAMEGLDDESFDALWTAEHFGYRPLVHRRSVRLMRKGSKLEVTDTLLE SGELPIPVALCWHLGPAVGCELGADRATLTWSGGRGELALPSQLAWRSHHGDEALPAGWYSPAFGHKVPSTTLIGSGVLR AGTSLVTELSWSADFRVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72897; Mature: 72897
Theoretical pI: Translated: 7.21; Mature: 7.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPGWYLRRLIRMELSELSGRVQDQLWRLFWRLQAPDIARLARRDARPNGVRLKALPSAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCC MVPAAAAARLLQRADRVLDGEWEIFGTRHPALGDDPDWFIDARSGRRAPSSDYAFAIAYR CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE DAGRHGDIKFIWEPARLHHLTVLSAAFALSGDERYAMRVAGHLRSWWHQNLFLHGPHWIS CCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCHHH GIEIGLRLIAFVWIRQLLSAWPGAGDLFEGNAEFIDQLYAHQLWLSRFPSRGSSANNHLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH AEAAGQFVASCAFPLFRQSGRWRVAAAETLAREAVIQTFPCGANRELASDYHGFVLELLL HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IAAIQGEAAGHPVAPEVWRAIELMTDAVASMIDPAGHAPRQGDSDEGIGLLVDDPAGNRW HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCE LGLIETGARLFGRPSWWPAEAADDVRSVLLTHDLWCRPRQADDAGRARRLFPDAGQAYLV EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEE SSRSGFWARCDHGPLGFGRIAAHGHADALSIECRIGGVDVLADPGTYCYHSEPRWRDYFR ECCCCCEEECCCCCCCCCHHCCCCCCCEEEEEEEECCEEEEECCCCEEECCCCHHHHHHH STLGHNTLQAFGHDQSRSGGPFLWTQHARSRLVAMEGLDDESFDALWTAEHFGYRPLVHR HHHCCHHHHHHCCCCCCCCCCEEEEHHHHHHEEEEECCCCCCCCCEEEHHHCCCCCHHHH RSVRLMRKGSKLEVTDTLLESGELPIPVALCWHLGPAVGCELGADRATLTWSGGRGELAL HHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHCCCHHCCCCCCCCEEEEECCCCCCCCC PSQLAWRSHHGDEALPAGWYSPAFGHKVPSTTLIGSGVLRAGTSLVTELSWSADFRVA CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MNPGWYLRRLIRMELSELSGRVQDQLWRLFWRLQAPDIARLARRDARPNGVRLKALPSAS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCC MVPAAAAARLLQRADRVLDGEWEIFGTRHPALGDDPDWFIDARSGRRAPSSDYAFAIAYR CCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCEEEEEEE DAGRHGDIKFIWEPARLHHLTVLSAAFALSGDERYAMRVAGHLRSWWHQNLFLHGPHWIS CCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEECCCHHH GIEIGLRLIAFVWIRQLLSAWPGAGDLFEGNAEFIDQLYAHQLWLSRFPSRGSSANNHLI HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCH AEAAGQFVASCAFPLFRQSGRWRVAAAETLAREAVIQTFPCGANRELASDYHGFVLELLL HHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHH IAAIQGEAAGHPVAPEVWRAIELMTDAVASMIDPAGHAPRQGDSDEGIGLLVDDPAGNRW HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCCCCE LGLIETGARLFGRPSWWPAEAADDVRSVLLTHDLWCRPRQADDAGRARRLFPDAGQAYLV EEHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCEEEE SSRSGFWARCDHGPLGFGRIAAHGHADALSIECRIGGVDVLADPGTYCYHSEPRWRDYFR ECCCCCEEECCCCCCCCCHHCCCCCCCEEEEEEEECCEEEEECCCCEEECCCCHHHHHHH STLGHNTLQAFGHDQSRSGGPFLWTQHARSRLVAMEGLDDESFDALWTAEHFGYRPLVHR HHHCCHHHHHHCCCCCCCCCCEEEEHHHHHHEEEEECCCCCCCCCEEEHHHCCCCCHHHH RSVRLMRKGSKLEVTDTLLESGELPIPVALCWHLGPAVGCELGADRATLTWSGGRGELAL HHHHHHHCCCCEEHHHHHHHCCCCCCHHHHHHHCCCHHCCCCCCCCEEEEECCCCCCCCC PSQLAWRSHHGDEALPAGWYSPAFGHKVPSTTLIGSGVLRAGTSLVTELSWSADFRVA CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA