| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is acaP [H]
Identifier: 146343512
GI number: 146343512
Start: 7005519
End: 7006280
Strand: Direct
Name: acaP [H]
Synonym: BRADO6744
Alternate gene names: 146343512
Gene position: 7005519-7006280 (Clockwise)
Preceding gene: 146343509
Following gene: 146343519
Centisome position: 93.95
GC content: 66.27
Gene sequence:
>762_bases ATGGACCGCCGCCACGTCTTGAAGGCCCTCGCGGGCCTCGCCCTCTGTCCTGTCTGTGCCACGCCGGGCTTCGCCGCCGA AGGCGCGCCGCATTGGAGCTATGAGGGCGCGACCGGGCCGGCCAAGTGGGGCGACCTCGACGCCGCCAACAAGGTGTGCA GCGTCGGCAACCAGCAATCGCCGATCGACATCGAGAACGCCATGAAGACCCGGCTGCCGGACTTCAAGCTGTCCTGGGCC AAGACCGCCGACACCATCGTCAACAACGGCCACACCATCCAGCTCAACTTCGCCGACGGCAGCGGCACGCTCAAGCTCGG CGAGACCAACTACAAGCTGCTGCAGGTGCACTTCCACCGGCCGAGCGAGCACCAGATCGGCGGCAAGAATTTTCCGATGG AGGCGCATTTCGTGCACCGCGCCGCCTCCGGTAGCCTCGCCGTGCTCGGCGTGCTCATGACCACCGGCCGGCCCAATGCC ACGTTCTCGCAGATCGTGGCGACGATGCCGGACAAGGAAGGCCCGGCGGTGAAGGCCGATCCGCGCATCAATCCCAACAT GATGCTGCCCGGCCGCCGCTCCTATTATCGCTATGCCGGCTCGCTGACGACGCCGCCCTGCTCCGAGGTCGTCGAGTGGC TGCTGCTGAGCGACCCGATCCAGGTGGCGGAAGCCGACGTCGCAAAATTCGCCAAGCTCTACCCGATGAACGCACGCCCC GTGCAGAAGCTCGATCGCCGCTTCGTACTGCAGGGGATGTAG
Upstream 100 bases:
>100_bases AACCAAAACAGGGTTCCCTGGTTCCCGCGATTCGCTCGCGCCGCCGGGCGCTGACGCGCCGCCCGATTGCATGCATCACG CCTGAGATTTGGAGATTGCC
Downstream 100 bases:
>100_bases TCGACCGCCCGCATGGGGCAAACGCGCCGCCAAACACTCCGCCGTCGTCCCGGCCTCCGAGCCGGGACAAATACCGCGGG ATGCTGATTGGTTTGCGAGG
Product: carbonic anhydrase
Products: NA
Alternate protein names: Carbonate dehydratase [H]
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MDRRHVLKALAGLALCPVCATPGFAAEGAPHWSYEGATGPAKWGDLDAANKVCSVGNQQSPIDIENAMKTRLPDFKLSWA KTADTIVNNGHTIQLNFADGSGTLKLGETNYKLLQVHFHRPSEHQIGGKNFPMEAHFVHRAASGSLAVLGVLMTTGRPNA TFSQIVATMPDKEGPAVKADPRINPNMMLPGRRSYYRYAGSLTTPPCSEVVEWLLLSDPIQVAEADVAKFAKLYPMNARP VQKLDRRFVLQGM
Sequences:
>Translated_253_residues MDRRHVLKALAGLALCPVCATPGFAAEGAPHWSYEGATGPAKWGDLDAANKVCSVGNQQSPIDIENAMKTRLPDFKLSWA KTADTIVNNGHTIQLNFADGSGTLKLGETNYKLLQVHFHRPSEHQIGGKNFPMEAHFVHRAASGSLAVLGVLMTTGRPNA TFSQIVATMPDKEGPAVKADPRINPNMMLPGRRSYYRYAGSLTTPPCSEVVEWLLLSDPIQVAEADVAKFAKLYPMNARP VQKLDRRFVLQGM >Mature_253_residues MDRRHVLKALAGLALCPVCATPGFAAEGAPHWSYEGATGPAKWGDLDAANKVCSVGNQQSPIDIENAMKTRLPDFKLSWA KTADTIVNNGHTIQLNFADGSGTLKLGETNYKLLQVHFHRPSEHQIGGKNFPMEAHFVHRAASGSLAVLGVLMTTGRPNA TFSQIVATMPDKEGPAVKADPRINPNMMLPGRRSYYRYAGSLTTPPCSEVVEWLLLSDPIQVAEADVAKFAKLYPMNARP VQKLDRRFVLQGM
Specific function: Reversible hydration of carbon dioxide [H]
COG id: COG3338
COG function: function code P; Carbonic anhydrase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the alpha-carbonic anhydrase family [H]
Homologues:
Organism=Homo sapiens, GI4885101, Length=256, Percent_Identity=33.59375, Blast_Score=115, Evalue=3e-26, Organism=Homo sapiens, GI258679498, Length=260, Percent_Identity=31.9230769230769, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI192447434, Length=260, Percent_Identity=31.9230769230769, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI192447432, Length=260, Percent_Identity=31.9230769230769, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI192447430, Length=260, Percent_Identity=31.9230769230769, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI4502517, Length=260, Percent_Identity=31.9230769230769, Blast_Score=108, Evalue=3e-24, Organism=Homo sapiens, GI4557395, Length=254, Percent_Identity=31.1023622047244, Blast_Score=106, Evalue=2e-23, Organism=Homo sapiens, GI62240989, Length=199, Percent_Identity=36.1809045226131, Blast_Score=102, Evalue=4e-22, Organism=Homo sapiens, GI4502521, Length=232, Percent_Identity=30.1724137931034, Blast_Score=100, Evalue=1e-21, Organism=Homo sapiens, GI4885099, Length=260, Percent_Identity=30.3846153846154, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI45935383, Length=290, Percent_Identity=30.3448275862069, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI4502515, Length=290, Percent_Identity=29.6551724137931, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI6005723, Length=232, Percent_Identity=31.4655172413793, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI6912284, Length=269, Percent_Identity=31.5985130111524, Blast_Score=96, Evalue=4e-20, Organism=Homo sapiens, GI38348436, Length=229, Percent_Identity=30.5676855895196, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI22027500, Length=210, Percent_Identity=31.9047619047619, Blast_Score=91, Evalue=8e-19, Organism=Homo sapiens, GI4502519, Length=277, Percent_Identity=29.2418772563177, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI194097398, Length=277, Percent_Identity=27.4368231046931, Blast_Score=87, Evalue=1e-17, Organism=Homo sapiens, GI91208428, Length=236, Percent_Identity=28.3898305084746, Blast_Score=85, Evalue=5e-17, Organism=Homo sapiens, GI70167127, Length=265, Percent_Identity=28.3018867924528, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI169636420, Length=223, Percent_Identity=30.4932735426009, Blast_Score=80, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568715, Length=236, Percent_Identity=30.9322033898305, Blast_Score=106, Evalue=1e-23, Organism=Caenorhabditis elegans, GI71995280, Length=264, Percent_Identity=28.7878787878788, Blast_Score=76, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17569163, Length=224, Percent_Identity=27.6785714285714, Blast_Score=75, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17569165, Length=224, Percent_Identity=27.6785714285714, Blast_Score=75, Evalue=4e-14, Organism=Drosophila melanogaster, GI17737413, Length=238, Percent_Identity=29.8319327731092, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI24645604, Length=278, Percent_Identity=29.136690647482, Blast_Score=96, Evalue=2e-20, Organism=Drosophila melanogaster, GI21358169, Length=272, Percent_Identity=27.5735294117647, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI161079350, Length=274, Percent_Identity=28.8321167883212, Blast_Score=80, Evalue=2e-15, Organism=Drosophila melanogaster, GI28573346, Length=258, Percent_Identity=26.3565891472868, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI116008410, Length=226, Percent_Identity=28.3185840707965, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI18858185, Length=239, Percent_Identity=24.2677824267782, Blast_Score=71, Evalue=6e-13, Organism=Drosophila melanogaster, GI20130189, Length=258, Percent_Identity=27.1317829457364, Blast_Score=71, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001148 - InterPro: IPR018338 - InterPro: IPR018340 [H]
Pfam domain/function: PF00194 Carb_anhydrase [H]
EC number: =4.2.1.1 [H]
Molecular weight: Translated: 27565; Mature: 27565
Theoretical pI: Translated: 9.16; Mature: 9.16
Prosite motif: PS00162 ALPHA_CA_1 ; PS51144 ALPHA_CA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRRHVLKALAGLALCPVCATPGFAAEGAPHWSYEGATGPAKWGDLDAANKVCSVGNQQS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PIDIENAMKTRLPDFKLSWAKTADTIVNNGHTIQLNFADGSGTLKLGETNYKLLQVHFHR CCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEEEEEECC PSEHQIGGKNFPMEAHFVHRAASGSLAVLGVLMTTGRPNATFSQIVATMPDKEGPAVKAD CCCCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHCCCCCCCCEECC PRINPNMMLPGRRSYYRYAGSLTTPPCSEVVEWLLLSDPIQVAEADVAKFAKLYPMNARP CCCCCCEECCCCHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH VQKLDRRFVLQGM HHHHHHHHHHCCC >Mature Secondary Structure MDRRHVLKALAGLALCPVCATPGFAAEGAPHWSYEGATGPAKWGDLDAANKVCSVGNQQS CCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCC PIDIENAMKTRLPDFKLSWAKTADTIVNNGHTIQLNFADGSGTLKLGETNYKLLQVHFHR CCCHHHHHHHCCCCCEEEHHHHHHHHHCCCCEEEEEEECCCCEEEECCCCEEEEEEEECC PSEHQIGGKNFPMEAHFVHRAASGSLAVLGVLMTTGRPNATFSQIVATMPDKEGPAVKAD CCCCCCCCCCCCCHHHHHHHCCCCCCEEEEHHHHCCCCCHHHHHHHHHCCCCCCCCEECC PRINPNMMLPGRRSYYRYAGSLTTPPCSEVVEWLLLSDPIQVAEADVAKFAKLYPMNARP CCCCCCEECCCCHHHHEECCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCH VQKLDRRFVLQGM HHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9108244; 7721686; 9761692 [H]