Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343223
Identifier: 146343223
GI number: 146343223
Start: 6685876
End: 6687198
Strand: Direct
Name: 146343223
Synonym: BRADO6433
Alternate gene names: NA
Gene position: 6685876-6687198 (Clockwise)
Preceding gene: 146343222
Following gene: 146343225
Centisome position: 89.66
GC content: 66.97
Gene sequence:
>1323_bases TTGAAGCCGGATAACAGAATGAACCTCCACGCCCTCCTCCAAGCCCGCGCCGCTGCCGGCAAGCCGGTGCGCGTCGCACT CATCGGCGCTGGCAAGTTCGGCTCGATGTTCCTGTCGCAGGTGCCGAATGTCGCCGGTCTCGACGTGCCCGTGATCATCG ATCTCGATCCGCAGCGGGCGCGCGAAGCCTGCCGCACGGTCGGCTGGAGCGCCGAGCTGATCGAACGCACGACGTTCAGC GCCGACAGCGCCAAGGCGCTCGCCGACTCCATCGATGTCGTCGTCGAAGCGACCGGCAGTCCGGCTGCCGGCATCCGGCA TGCGCGCGCGGCGATCAGGGCCGGCAAGCACATCGTGATGGTCAATGTCGAGGCCGACGTGCTCGCCGGGCCGCTGCTGG CCGACGAGGCGCGCAAGGCCGGCGTGGTCTATTCGCTCGCCTATGGCGACCAGCCGGCGCTGACGGCCGAGCTCGTCGAC TGGGCGCGCGCGACCGGCTTTCATGTCGTGGCCGCGGGCAAGGGCACCAAATATCTGCCGGCCTATCACGACGTGACGCC CGATGGCGTCTGGCAGCATTACGGGCTTACCGCGGGCGAGGCGCAGTCCGGCGGCATGAACCCGCAGATGTTCAACTCCT TTCTCGACGGCACGAAGTCGGCCATCGAGATGGCGGCGATCGCCAATGCGACCGGACTCGACGTGCCGTCCGACGGCCTG TTGTTTCCGCCCTGCGGCGTCGACGACCTGCCGCAAGTGCTCCGGCCGCGCGAGCGCGGCGGCGTGCTGGAGCGTTCCGG CATGGTCGAGGTGGTGTCGTCGCTCGAGCGCGACGGTCGCCCGGTGTTTCGTGATTTACGCTGGGGTGTCTATGTCGTGC TCGAAGCACCGAACGACTACGCTGCGGATTGCTTCAAGCAATACGGACTGAAGACCGACGCGACCGGGCGCTACGCCGCG ATGTACAAGCCCTATCATCTGATCGGGCTCGAGCTGAACGTGTCGGTGCTTTCGGCCGCGCTACGCAGCGAACCAACTGG GCAGCCGCTCTGCTTCCGCGGCGATGTCGTCGCCGTCGCCAAGAAGGATCTGCGCGCAGGCGAGATCCTCGATGGCGAAG GTGGCTATACGGTGTGGGGCAAGGTGATGCCCGCCAGCGCCAGCCTGCAGCTCGGCGCGCTGCCAATTGGATTGGCGCAT CGGGTCAAGCTGGTGAACGACGTTGCGCACGGCCACGTGGTGCGTTGGAGCGACGTCGCAGCCGATGCGGCGGACGAGAC AGTGAAGTATCGCAAGCAGATGGAGACGGCGTTCGCCCGGTGA
Upstream 100 bases:
>100_bases TCCATCCTCTGAGCAAGAGCGAGCCTTGTGAGGAGATGGATGGCCGGGTCAAGCCCGGCCATGACGACTGGGTTGGTAGC TGCCTGTCACACGACAATCC
Downstream 100 bases:
>100_bases GCGTTCGCGCGCCTCGCTCGCGCGAGCCGCATAAAAAAGCCCCGACCGCTGGTCGGGGCTTGGTGGCCTGTAGGCGAGAG GCGAATCTTTTGTCCCTAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Homoserine Dehydrogenase; SAF Domain Protein; NAD(P)-Dependent Oxidoreductase; Dihydrodipicolinate Reductase; Oxidoreductase; Oxidoreductase Domain Protein; Oxidoreductase Domain-Containing Protein; Oxidoreductase-Like; StrU Protein; Saf Domain Protein; SAF Domain Family Protein
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKPDNRMNLHALLQARAAAGKPVRVALIGAGKFGSMFLSQVPNVAGLDVPVIIDLDPQRAREACRTVGWSAELIERTTFS ADSAKALADSIDVVVEATGSPAAGIRHARAAIRAGKHIVMVNVEADVLAGPLLADEARKAGVVYSLAYGDQPALTAELVD WARATGFHVVAAGKGTKYLPAYHDVTPDGVWQHYGLTAGEAQSGGMNPQMFNSFLDGTKSAIEMAAIANATGLDVPSDGL LFPPCGVDDLPQVLRPRERGGVLERSGMVEVVSSLERDGRPVFRDLRWGVYVVLEAPNDYAADCFKQYGLKTDATGRYAA MYKPYHLIGLELNVSVLSAALRSEPTGQPLCFRGDVVAVAKKDLRAGEILDGEGGYTVWGKVMPASASLQLGALPIGLAH RVKLVNDVAHGHVVRWSDVAADAADETVKYRKQMETAFAR
Sequences:
>Translated_440_residues MKPDNRMNLHALLQARAAAGKPVRVALIGAGKFGSMFLSQVPNVAGLDVPVIIDLDPQRAREACRTVGWSAELIERTTFS ADSAKALADSIDVVVEATGSPAAGIRHARAAIRAGKHIVMVNVEADVLAGPLLADEARKAGVVYSLAYGDQPALTAELVD WARATGFHVVAAGKGTKYLPAYHDVTPDGVWQHYGLTAGEAQSGGMNPQMFNSFLDGTKSAIEMAAIANATGLDVPSDGL LFPPCGVDDLPQVLRPRERGGVLERSGMVEVVSSLERDGRPVFRDLRWGVYVVLEAPNDYAADCFKQYGLKTDATGRYAA MYKPYHLIGLELNVSVLSAALRSEPTGQPLCFRGDVVAVAKKDLRAGEILDGEGGYTVWGKVMPASASLQLGALPIGLAH RVKLVNDVAHGHVVRWSDVAADAADETVKYRKQMETAFAR >Mature_440_residues MKPDNRMNLHALLQARAAAGKPVRVALIGAGKFGSMFLSQVPNVAGLDVPVIIDLDPQRAREACRTVGWSAELIERTTFS ADSAKALADSIDVVVEATGSPAAGIRHARAAIRAGKHIVMVNVEADVLAGPLLADEARKAGVVYSLAYGDQPALTAELVD WARATGFHVVAAGKGTKYLPAYHDVTPDGVWQHYGLTAGEAQSGGMNPQMFNSFLDGTKSAIEMAAIANATGLDVPSDGL LFPPCGVDDLPQVLRPRERGGVLERSGMVEVVSSLERDGRPVFRDLRWGVYVVLEAPNDYAADCFKQYGLKTDATGRYAA MYKPYHLIGLELNVSVLSAALRSEPTGQPLCFRGDVVAVAKKDLRAGEILDGEGGYTVWGKVMPASASLQLGALPIGLAH RVKLVNDVAHGHVVRWSDVAADAADETVKYRKQMETAFAR
Specific function: Unknown
COG id: COG4091
COG function: function code E; Predicted homoserine dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46894; Mature: 46894
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPDNRMNLHALLQARAAAGKPVRVALIGAGKFGSMFLSQVPNVAGLDVPVIIDLDPQRA CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCHHHH REACRTVGWSAELIERTTFSADSAKALADSIDVVVEATGSPAAGIRHARAAIRAGKHIVM HHHHHHCCCCHHHHHHHCCCCCHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCEEEE VNVEADVLAGPLLADEARKAGVVYSLAYGDQPALTAELVDWARATGFHVVAAGKGTKYLP EEECHHHHHCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC AYHDVTPDGVWQHYGLTAGEAQSGGMNPQMFNSFLDGTKSAIEMAAIANATGLDVPSDGL CCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCE LFPPCGVDDLPQVLRPRERGGVLERSGMVEVVSSLERDGRPVFRDLRWGVYVVLEAPNDY EECCCCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCH AADCFKQYGLKTDATGRYAAMYKPYHLIGLELNVSVLSAALRSEPTGQPLCFRGDVVAVA HHHHHHHCCCCCCCCCCEEEEECCEEEEEEEECHHHHHHHHHCCCCCCCEEEECCEEEEE KKDLRAGEILDGEGGYTVWGKVMPASASLQLGALPIGLAHRVKLVNDVAHGHVVRWSDVA HHCCCCCCEEECCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHH ADAADETVKYRKQMETAFAR CCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKPDNRMNLHALLQARAAAGKPVRVALIGAGKFGSMFLSQVPNVAGLDVPVIIDLDPQRA CCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHCCCCCCCCEEEEEECCHHHH REACRTVGWSAELIERTTFSADSAKALADSIDVVVEATGSPAAGIRHARAAIRAGKHIVM HHHHHHCCCCHHHHHHHCCCCCHHHHHHHCEEEEEEECCCCHHHHHHHHHHHHCCCEEEE VNVEADVLAGPLLADEARKAGVVYSLAYGDQPALTAELVDWARATGFHVVAAGKGTKYLP EEECHHHHHCCHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCC AYHDVTPDGVWQHYGLTAGEAQSGGMNPQMFNSFLDGTKSAIEMAAIANATGLDVPSDGL CCCCCCCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCE LFPPCGVDDLPQVLRPRERGGVLERSGMVEVVSSLERDGRPVFRDLRWGVYVVLEAPNDY EECCCCCCHHHHHHCCHHHCCCCCCCCHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCCH AADCFKQYGLKTDATGRYAAMYKPYHLIGLELNVSVLSAALRSEPTGQPLCFRGDVVAVA HHHHHHHCCCCCCCCCCEEEEECCEEEEEEEECHHHHHHHHHCCCCCCCEEEECCEEEEE KKDLRAGEILDGEGGYTVWGKVMPASASLQLGALPIGLAHRVKLVNDVAHGHVVRWSDVA HHCCCCCCEEECCCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHCCCEEEEHHHH ADAADETVKYRKQMETAFAR CCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA