Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

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The map label for this gene is ectD [H]

Identifier: 146343222

GI number: 146343222

Start: 6684912

End: 6685712

Strand: Direct

Name: ectD [H]

Synonym: BRADO6432

Alternate gene names: 146343222

Gene position: 6684912-6685712 (Clockwise)

Preceding gene: 146343221

Following gene: 146343223

Centisome position: 89.65

GC content: 65.42

Gene sequence:

>801_bases
ATGAAGCTGACGCCGGAGCAGATCGCATTCTTCAACCGCGAGGGCTGGCTGTTCCTGCCGGAACTGTTCAGCCCGGAGGA
GACCGCCTTCCTCGCCCGCGAGGCGGAGGCGATCTACGCCGCCGACAGGCCCGAGGTCTGGCGCGAGAAGAGCGGCGTAC
CGCGCACGGCGTTTGCCGCGCATCTGTACAATGACGCGTTCCGCGTGCTCGCGGCGCATCCGCGCATGATCGAGCCGATC
GAGCAGATCTTCGGCGAGAAGCTCTACATGCATCAGTTCAAGATCAACGCCAAATCCGCCTTCACCGGCGACGTCTGGCA
GTGGCACCAGGACTACGGCACCTGGAAGCGCGACGACGGCATGCCGGAGCCGCGCGCGATGAACATCGCGATCTTCCTCG
ACGAGGTGATGCCGATCAACGGCCCGTTGATGCTGGTGCCACGCAGCCAGCACGAAGGCGATCTCGAGGCCTCACACGAT
CTGGCCACGACGTCCTATCCGTTGTGGACGCTCGACGAGGCGACGGTGACGCGGCTGGTCGCCCAAGGCGGCATTGTGGC
GCCGACCGGCAAGCGCGGCGGCATGCTGATGTTCCACGGCAATCTCGTGCACGGCTCCGCCGGCAACATCACGCCCTACC
CGCGTAAGATCGTGTACCTGACGCTGAACGCGGTCTCGAACCACATTCGCACCCCGACGAGGCCGGAGTACATCGCGCAT
CGCGACTTCACGCCGATCGAGACGTTGCCGGACGATGCATTGCTGCAGCTGGCGCGGGCGCATCGCGAGGCGGCGGAGTA
A

Upstream 100 bases:

>100_bases
CGCATGCTGATCGAGCAGGGCAAGAAGATGTAGCTTCGCGTCGGACGCAGCCCGGCGAAGACCGGGCGCCTCCAAGAGGA
AACGAGCAAGAGAGGCCACC

Downstream 100 bases:

>100_bases
GGCACAGCGCTCGCCACAAAAGAGGTCGTCATGCCCCGGGCTCGACCAGGCTCGACCCGGGCATCCATCCTCTGAGCAAG
AGCGAGCCTTGTGAGGAGAT

Product: putative ectoine hydroxylase (ectD)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAAHLYNDAFRVLAAHPRMIEPI
EQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDGMPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHD
LATTSYPLWTLDEATVTRLVAQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH
RDFTPIETLPDDALLQLARAHREAAE

Sequences:

>Translated_266_residues
MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAAHLYNDAFRVLAAHPRMIEPI
EQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDGMPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHD
LATTSYPLWTLDEATVTRLVAQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH
RDFTPIETLPDDALLQLARAHREAAE
>Mature_266_residues
MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAAHLYNDAFRVLAAHPRMIEPI
EQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDGMPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHD
LATTSYPLWTLDEATVTRLVAQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH
RDFTPIETLPDDALLQLARAHREAAE

Specific function: Catalyzes the conversion of ectoine to hydroxyectoine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PhyH family. EctD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012774
- InterPro:   IPR008775 [H]

Pfam domain/function: PF05721 PhyH [H]

EC number: NA

Molecular weight: Translated: 30146; Mature: 30146

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAA
CCCCHHHHHEECCCCCEECCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHH
HLYNDAFRVLAAHPRMIEPIEQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDG
HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCC
MPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHDLATTSYPLWTLDEATVTRLV
CCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHH
AQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH
HCCCEECCCCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEC
RDFTPIETLPDDALLQLARAHREAAE
CCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKLTPEQIAFFNREGWLFLPELFSPEETAFLAREAEAIYAADRPEVWREKSGVPRTAFAA
CCCCHHHHHEECCCCCEECCCCCCCCHHHHHHHHHHHEEECCCCHHHHHHCCCCHHHHHH
HLYNDAFRVLAAHPRMIEPIEQIFGEKLYMHQFKINAKSAFTGDVWQWHQDYGTWKRDDG
HHHHHHHHHHHCCCHHHHHHHHHHCCCEEEEEEEECCCCCCCCHHHHHHHHCCCCCCCCC
MPEPRAMNIAIFLDEVMPINGPLMLVPRSQHEGDLEASHDLATTSYPLWTLDEATVTRLV
CCCCCEEEEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEEECHHHHHHHH
AQGGIVAPTGKRGGMLMFHGNLVHGSAGNITPYPRKIVYLTLNAVSNHIRTPTRPEYIAH
HCCCEECCCCCCCCEEEEECCEEECCCCCCCCCCCEEEEEEEHHHHHHCCCCCCCCEEEC
RDFTPIETLPDDALLQLARAHREAAE
CCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA