Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146343225
Identifier: 146343225
GI number: 146343225
Start: 6688306
End: 6688671
Strand: Direct
Name: 146343225
Synonym: BRADO6435
Alternate gene names: NA
Gene position: 6688306-6688671 (Clockwise)
Preceding gene: 146343223
Following gene: 146343226
Centisome position: 89.7
GC content: 69.95
Gene sequence:
>366_bases ATGGCCAAGTCGGAAGTGGAAGTGATCACGTCGGAGCGGCGGCGCCGGCACTGGTCGCGGGCGGACAAGGAGCGCGTCGT GGCTGCAGCGTTGCAGCCAGGCGCGACGATCCTGGGCGTGGCGCGAGCGTTCGGTGTGCATTCCAGTCAGGTGTTCCGCT GGCGTCAGCAGCTGTGCGGGAAGGAGACGCCGTCGCCCGGCTTTGCCGCGGTGACGATCGCGGCCGATCCGCATGCGGCG CCAGCCTGCACGCAAGGGCTGATCGAGGTCGAGATCGGGACTGAGACGAAGATCCGGATCAGCGGCCCGGCGGATGCCGC GACGGTGACGGCGGTGATCGCGGCGCTCCGGGTGGGCTCGCGATGA
Upstream 100 bases:
>100_bases CACACGCTTGTGCGCCTGCGATGTAACCCCCCGGTGACGGCCGCCTTGCGTCGGCAGTGAGGCTTCGCGAAGCCATAGGA TTAGTCCTGGAGCTAGTCCT
Downstream 100 bases:
>100_bases CGATCCCGATCCCCTCCGGCACCCAGGTCTGGCTGGCGACCGGGCACACGGATATGCGCAAGGGCTTCGACGGTCTGGCG CTGCTGGTCCAAGAGACGCT
Product: putative transposase from insertion sequence
Products: NA
Alternate protein names: Transposase-Related Protein; Insertion Sequence Transposase Protein; Transposase Insertion Sequence
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MAKSEVEVITSERRRRHWSRADKERVVAAALQPGATILGVARAFGVHSSQVFRWRQQLCGKETPSPGFAAVTIAADPHAA PACTQGLIEVEIGTETKIRISGPADAATVTAVIAALRVGSR
Sequences:
>Translated_121_residues MAKSEVEVITSERRRRHWSRADKERVVAAALQPGATILGVARAFGVHSSQVFRWRQQLCGKETPSPGFAAVTIAADPHAA PACTQGLIEVEIGTETKIRISGPADAATVTAVIAALRVGSR >Mature_120_residues AKSEVEVITSERRRRHWSRADKERVVAAALQPGATILGVARAFGVHSSQVFRWRQQLCGKETPSPGFAAVTIAADPHAAP ACTQGLIEVEIGTETKIRISGPADAATVTAVIAALRVGSR
Specific function: Unknown
COG id: COG2963
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12843; Mature: 12712
Theoretical pI: Translated: 10.72; Mature: 10.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSEVEVITSERRRRHWSRADKERVVAAALQPGATILGVARAFGVHSSQVFRWRQQLCG CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC KETPSPGFAAVTIAADPHAAPACTQGLIEVEIGTETKIRISGPADAATVTAVIAALRVGS CCCCCCCEEEEEEECCCCCCCHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCC R C >Mature Secondary Structure AKSEVEVITSERRRRHWSRADKERVVAAALQPGATILGVARAFGVHSSQVFRWRQQLCG CCCHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHCC KETPSPGFAAVTIAADPHAAPACTQGLIEVEIGTETKIRISGPADAATVTAVIAALRVGS CCCCCCCEEEEEEECCCCCCCHHCCCEEEEEECCCEEEEECCCCCHHHHHHHHHHHHCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA