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The map label for this gene is yfhC [C]

Identifier: 146342901

GI number: 146342901

Start: 6309661

End: 6310107

Strand: Direct

Name: yfhC [C]

Synonym: BRADO6082

Alternate gene names: 146342901

Gene position: 6309661-6310107 (Clockwise)

Preceding gene: 146342898

Following gene: 146342911

Centisome position: 84.62

GC content: 68.23

Gene sequence:

>447_bases
ATGAACAGCCCTTCTTTCATGGATTTGGCCCTAAAAGCGGCCGAATCGGCCGCAATTTCCGGCGAGGTGCCGATCGGCTG
CGTCGTGGTGCGCGACGGCACAGTGATCGCCGCCGCCGCCAACCGCACCCTGACCGACCGCGACCCGACCGCGCACGCCG
AGATCCTGGCGCTGCGCCAGGCCGCCCAGGCGATCGGCAGCGAGCGGCTGATCGATTGCGACCTCTACGTCACGCTGGAG
CCGTGCACGATGTGCGCCGGCGCCATCTCCTTCGCCCGTATCCGCCGGCTGTATTACGGGGCGGCCGACTCCAAGGGCGG
CGCCGTGGAGTCAGGCGTGCGCTTCTTCGCCGCGCCGACGTGCCATCACGCACCGGAGGTCTATTCGGCGGTCGGCGAGC
AGCAGTCGGCGCAAATGCTCAGGGAGTTCTTTAAGGCGCGGCGCTGA

Upstream 100 bases:

>100_bases
GTGATACGCGCGCTTCGGAAGCAGCGCATGTCACGCGAAAATGGGGTCCGGTTGTGCTGAAGGGCGATCCAGTAGCAGAC
TTGGACGAGCGTGACGAGCC

Downstream 100 bases:

>100_bases
TGTCACTTGCTCAGCAAGAACTCCCGCAACAGCCGCGCCGTTTCGGCCGGGTTCTCCTCGGTGAGGAAGTGCCCGGAATC
GACCGCCACGCCGCGGACGT

Product: putative cytidine and deoxycytidylate deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MNSPSFMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAIGSERLIDCDLYVTLE
PCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAPEVYSAVGEQQSAQMLREFFKARR

Sequences:

>Translated_148_residues
MNSPSFMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAIGSERLIDCDLYVTLE
PCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAPEVYSAVGEQQSAQMLREFFKARR
>Mature_148_residues
MNSPSFMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQAAQAIGSERLIDCDLYVTLE
PCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPTCHHAPEVYSAVGEQQSAQMLREFFKARR

Specific function: Mutation In This Protein Makes E.Coli Resistant To The Toxic Proteins Encoded By The Gef Gene Family. [C]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=150, Percent_Identity=28.6666666666667, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI145693172, Length=143, Percent_Identity=44.0559440559441, Blast_Score=121, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17554608, Length=97, Percent_Identity=41.2371134020619, Blast_Score=87, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI17541138, Length=144, Percent_Identity=33.3333333333333, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17555996, Length=79, Percent_Identity=43.0379746835443, Blast_Score=69, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6322425, Length=161, Percent_Identity=29.8136645962733, Blast_Score=65, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21355527, Length=148, Percent_Identity=30.4054054054054, Blast_Score=68, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 15780; Mature: 15780

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: PS00903 CYT_DCMP_DEAMINASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSPSFMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQ
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHH
AAQAIGSERLIDCDLYVTLEPCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPT
HHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCC
CHHAPEVYSAVGEQQSAQMLREFFKARR
CCCCHHHHHHHCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSPSFMDLALKAAESAAISGEVPIGCVVVRDGTVIAAAANRTLTDRDPTAHAEILALRQ
CCCCHHHHHHHHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCHHHHHHHHHH
AAQAIGSERLIDCDLYVTLEPCTMCAGAISFARIRRLYYGAADSKGGAVESGVRFFAAPT
HHHHCCCCCEEEEEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEECCC
CHHAPEVYSAVGEQQSAQMLREFFKARR
CCCCHHHHHHHCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA