| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is mutL [H]
Identifier: 146342898
GI number: 146342898
Start: 6304635
End: 6306476
Strand: Direct
Name: mutL [H]
Synonym: BRADO6079
Alternate gene names: 146342898
Gene position: 6304635-6306476 (Clockwise)
Preceding gene: 146342896
Following gene: 146342901
Centisome position: 84.55
GC content: 70.25
Gene sequence:
>1842_bases ATGCCCGTCCGCCAGCTTCCCGAACAGGTCATCAACCGCATCGCCGCCGGCGAGGTGGTCGAGCGGCCCGCAAGTGTCGT CAAGGAGCTGGTCGAGAACGCGATCGATGCCGGTGCGAGCCGCATCGACATCTTCACCGATGGCGGCGGCCGGCGCAAAA TTGCGATCACCGACGACGGCGGCGGCATGACCGCGGCCGATCTCGCACTCGCCGTCGAACGCCACGCGACCTCGAAGCTC GACGACGAGGACCTCTTGCAGATCCGCACGCTCGGGTTCCGCGGCGAGGCGCTGCCGTCGATCGGCTCGGTGGCGCGGCT GTCGATCACGACGCGGCACAAGAGCGAGCCGCATGCCTGGGGCATCACGGTCGATTGCGGCGACAAGTCACAGATCGTAC CGGCCGCACTCAACCAGGGCACCCGCGTCGAAGTGGCCGATCTCTTCCATGCGACGCCGGCGCGGCTGAAGTTCCTCAAA ACCGACCGCACCGAGGCGGAGGCGATCCGCGAGGTGGTGCGGCGGCTGGCGATGGCGCGCCCCGACATCGCCTTCACGGT CGCCGGAGAGGAGCGGGCGCCGGTGACCTGGGCCGCCGCTTTGCCCGGCGCGCCGGGGCAACTGACGCGGCTCGGCGACA TCCTGGGCACCGACTTCCGCAGCCATGCGATCGCGGTGCGCAGCGAGCGCGACCATGTGGCGGTCGAAGGCTTCGCCGCC GCGCCGGCGCTGACGCGCGCCAATGCGCTCGGGCAGTATCTGTTCGTCAACGGCCGCCCGGTGCGCGACAAATTGATCCT CGGCGCGGTGCGCGCGGCCTATGCCGACTATCTGCCGCGCGACCGGCATCCGGTGGTGGCGCTGTTCGTGACGCTCGATC CGCGCGAGGTCGACGCCAACGTGCATCCTGCCAAGACCGAAGTGCGCTTCCGCAATGCCGGCCTGGTGCGCGCGCTGATC ATCCACGCGCTGAAGGAGGGCCTCGCCCGCGAAGGCCGCCGCACCGCCGCCAATGACGGCGGCGCGACCATCGCGGCGTT CCGCCCGGCGTTCACGCCACCGCGGCCGAGCGCGGGACCGATGAACTGGGATTGGCAGCGTTCGCCATCCGCTCCGATCC CGCGCCATGACGACGTGGACTCCATGCCCCCGGCCGTCTCGTCCGCCGCCTTCGCCGAGCCGATGCAGGCCGCGTTCGAC GTCGGCGGCCCGCGCGCCGATCTCCGCCTGCACGAGCAGCCGGCCGCGCCCGACATGCTCGACCGCCCGCTCGGCGCCGC GCGCACGCAGATCCACGACACCTACATCGTTTCACAGACGCGCGACGGCCTTGTCATCGTCGATCAGCACGCCGCGCATG AGCGTATCGTCTACGAGCGGCTGAAGACCTCGCTCGCCGCGCATGGCGTGCAGCGGCAGATCCTGTTGATTCCCGATATC GTCGAGCTCGACGAGGCCACCGTCGAGGCACTGCTCGCGCGCACCGATGAACTCGCCGCGTTCGGACTCGCCGTCGAATC CTTCGGCCCCGGCGCGGTAGCCGTGCGCGAGACACCGTCACTGCTCGGCAAGATCAATGCGGCGGGCCTGCTGCGCGACC TCGCCGAGCACATGGAGGAATGGGGCGAGGCGCTGCCGTTGGAGCGCCGTCTGATGCACGTCGCCGCCACCATGGCCTGC CACGGCTCCGTCCGCGCCGGCCGCCGCCTCAAGCCGGAGGAGATGAACGCGCTGCTCCGCGTGATGGAGGAGACGCCCAA CTCCGGCCAGTGCAACCACGGCCGCCCGACCTATGTCGAGCTGAAGCTCGCCGACGTCGAGAAGCTGTTCGGGAGGAGAT AG
Upstream 100 bases:
>100_bases AAAGGCTATTCTCCGGGCCAACATTGTGGCGTCGCAACGTGGCTCCCCTGCGCTGCGAGGGCTACAACAGCGTACCCGAA TCCGACGACAGTCCCGCGCC
Downstream 100 bases:
>100_bases CGAAGACGGCCTGGAAATACACTAGGAGGAAAACGACGCCAGCTCCAAATACGGTGTCGTCCCGGGCAAGCCGCAGCGGC GCAACGCGCCGCGGAGGCGC
Product: DNA mismatch repair protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 613; Mature: 612
Protein sequence:
>613_residues MPVRQLPEQVINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDGGGMTAADLALAVERHATSKL DDEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAWGITVDCGDKSQIVPAALNQGTRVEVADLFHATPARLKFLK TDRTEAEAIREVVRRLAMARPDIAFTVAGEERAPVTWAAALPGAPGQLTRLGDILGTDFRSHAIAVRSERDHVAVEGFAA APALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDANVHPAKTEVRFRNAGLVRALI IHALKEGLAREGRRTAANDGGATIAAFRPAFTPPRPSAGPMNWDWQRSPSAPIPRHDDVDSMPPAVSSAAFAEPMQAAFD VGGPRADLRLHEQPAAPDMLDRPLGAARTQIHDTYIVSQTRDGLVIVDQHAAHERIVYERLKTSLAAHGVQRQILLIPDI VELDEATVEALLARTDELAAFGLAVESFGPGAVAVRETPSLLGKINAAGLLRDLAEHMEEWGEALPLERRLMHVAATMAC HGSVRAGRRLKPEEMNALLRVMEETPNSGQCNHGRPTYVELKLADVEKLFGRR
Sequences:
>Translated_613_residues MPVRQLPEQVINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDGGGMTAADLALAVERHATSKL DDEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAWGITVDCGDKSQIVPAALNQGTRVEVADLFHATPARLKFLK TDRTEAEAIREVVRRLAMARPDIAFTVAGEERAPVTWAAALPGAPGQLTRLGDILGTDFRSHAIAVRSERDHVAVEGFAA APALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDANVHPAKTEVRFRNAGLVRALI IHALKEGLAREGRRTAANDGGATIAAFRPAFTPPRPSAGPMNWDWQRSPSAPIPRHDDVDSMPPAVSSAAFAEPMQAAFD VGGPRADLRLHEQPAAPDMLDRPLGAARTQIHDTYIVSQTRDGLVIVDQHAAHERIVYERLKTSLAAHGVQRQILLIPDI VELDEATVEALLARTDELAAFGLAVESFGPGAVAVRETPSLLGKINAAGLLRDLAEHMEEWGEALPLERRLMHVAATMAC HGSVRAGRRLKPEEMNALLRVMEETPNSGQCNHGRPTYVELKLADVEKLFGRR >Mature_612_residues PVRQLPEQVINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDGGGMTAADLALAVERHATSKLD DEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAWGITVDCGDKSQIVPAALNQGTRVEVADLFHATPARLKFLKT DRTEAEAIREVVRRLAMARPDIAFTVAGEERAPVTWAAALPGAPGQLTRLGDILGTDFRSHAIAVRSERDHVAVEGFAAA PALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDANVHPAKTEVRFRNAGLVRALII HALKEGLAREGRRTAANDGGATIAAFRPAFTPPRPSAGPMNWDWQRSPSAPIPRHDDVDSMPPAVSSAAFAEPMQAAFDV GGPRADLRLHEQPAAPDMLDRPLGAARTQIHDTYIVSQTRDGLVIVDQHAAHERIVYERLKTSLAAHGVQRQILLIPDIV ELDEATVEALLARTDELAAFGLAVESFGPGAVAVRETPSLLGKINAAGLLRDLAEHMEEWGEALPLERRLMHVAATMACH GSVRAGRRLKPEEMNALLRVMEETPNSGQCNHGRPTYVELKLADVEKLFGRR
Specific function: This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a "molecular matchmaker", a protein that promotes the formation of a stable complex between two or more DNA-bindi
COG id: COG0323
COG function: function code L; DNA mismatch repair enzyme (predicted ATPase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the DNA mismatch repair mutL/hexB family [H]
Homologues:
Organism=Homo sapiens, GI4557757, Length=314, Percent_Identity=38.2165605095541, Blast_Score=190, Evalue=4e-48, Organism=Homo sapiens, GI4505911, Length=325, Percent_Identity=28.9230769230769, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI189458898, Length=325, Percent_Identity=28.9230769230769, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI189458896, Length=318, Percent_Identity=27.9874213836478, Blast_Score=127, Evalue=3e-29, Organism=Homo sapiens, GI4505913, Length=349, Percent_Identity=27.5071633237822, Blast_Score=120, Evalue=3e-27, Organism=Homo sapiens, GI310128478, Length=349, Percent_Identity=27.5071633237822, Blast_Score=119, Evalue=6e-27, Organism=Homo sapiens, GI263191589, Length=220, Percent_Identity=33.6363636363636, Blast_Score=98, Evalue=2e-20, Organism=Homo sapiens, GI91992162, Length=360, Percent_Identity=24.7222222222222, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI91992160, Length=360, Percent_Identity=24.7222222222222, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1790612, Length=334, Percent_Identity=46.7065868263473, Blast_Score=267, Evalue=1e-72, Organism=Caenorhabditis elegans, GI71991825, Length=332, Percent_Identity=32.8313253012048, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17562796, Length=341, Percent_Identity=25.8064516129032, Blast_Score=116, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6323819, Length=314, Percent_Identity=35.3503184713376, Blast_Score=194, Evalue=4e-50, Organism=Saccharomyces cerevisiae, GI6324247, Length=358, Percent_Identity=27.0949720670391, Blast_Score=114, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6325093, Length=737, Percent_Identity=21.9810040705563, Blast_Score=102, Evalue=2e-22, Organism=Drosophila melanogaster, GI17136968, Length=342, Percent_Identity=37.719298245614, Blast_Score=196, Evalue=3e-50, Organism=Drosophila melanogaster, GI17136970, Length=357, Percent_Identity=25.7703081232493, Blast_Score=107, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR002099 - InterPro: IPR013507 - InterPro: IPR014762 - InterPro: IPR020667 - InterPro: IPR014763 - InterPro: IPR014790 - InterPro: IPR020568 - InterPro: IPR014721 [H]
Pfam domain/function: PF01119 DNA_mis_repair; PF02518 HATPase_c; PF08676 MutL_C [H]
EC number: NA
Molecular weight: Translated: 66421; Mature: 66289
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: PS00058 DNA_MISMATCH_REPAIR_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVRQLPEQVINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECC GGMTAADLALAVERHATSKLDDEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAW CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEE GITVDCGDKSQIVPAALNQGTRVEVADLFHATPARLKFLKTDRTEAEAIREVVRRLAMAR EEEEECCCCCCCCHHHHCCCCEEEHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHHHCC PDIAFTVAGEERAPVTWAAALPGAPGQLTRLGDILGTDFRSHAIAVRSERDHVAVEGFAA CCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHCEEEEECCCCCEEEECCHH APALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDAN CCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHCCCC VHPAKTEVRFRNAGLVRALIIHALKEGLAREGRRTAANDGGATIAAFRPAFTPPRPSAGP CCCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC MNWDWQRSPSAPIPRHDDVDSMPPAVSSAAFAEPMQAAFDVGGPRADLRLHEQPAAPDML CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHH DRPLGAARTQIHDTYIVSQTRDGLVIVDQHAAHERIVYERLKTSLAAHGVQRQILLIPDI HCCCCHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCH VELDEATVEALLARTDELAAFGLAVESFGPGAVAVRETPSLLGKINAAGLLRDLAEHMEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH WGEALPLERRLMHVAATMACHGSVRAGRRLKPEEMNALLRVMEETPNSGQCNHGRPTYVE HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEE LKLADVEKLFGRR EEHHHHHHHHCCC >Mature Secondary Structure PVRQLPEQVINRIAAGEVVERPASVVKELVENAIDAGASRIDIFTDGGGRRKIAITDDG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEEECC GGMTAADLALAVERHATSKLDDEDLLQIRTLGFRGEALPSIGSVARLSITTRHKSEPHAW CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEE GITVDCGDKSQIVPAALNQGTRVEVADLFHATPARLKFLKTDRTEAEAIREVVRRLAMAR EEEEECCCCCCCCHHHHCCCCEEEHHHHHHCCHHHHEEECCCCHHHHHHHHHHHHHHHCC PDIAFTVAGEERAPVTWAAALPGAPGQLTRLGDILGTDFRSHAIAVRSERDHVAVEGFAA CCEEEEECCCCCCCEEEEECCCCCCCHHHHHHHHHCCCHHHCEEEEECCCCCEEEECCHH APALTRANALGQYLFVNGRPVRDKLILGAVRAAYADYLPRDRHPVVALFVTLDPREVDAN CCHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECHHHCCCC VHPAKTEVRFRNAGLVRALIIHALKEGLAREGRRTAANDGGATIAAFRPAFTPPRPSAGP CCCCHHEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCCCCCC MNWDWQRSPSAPIPRHDDVDSMPPAVSSAAFAEPMQAAFDVGGPRADLRLHEQPAAPDML CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCHHH DRPLGAARTQIHDTYIVSQTRDGLVIVDQHAAHERIVYERLKTSLAAHGVQRQILLIPDI HCCCCHHHHHHHHEEEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCEEEECCCH VELDEATVEALLARTDELAAFGLAVESFGPGAVAVRETPSLLGKINAAGLLRDLAEHMEE HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHH WGEALPLERRLMHVAATMACHGSVRAGRRLKPEEMNALLRVMEETPNSGQCNHGRPTYVE HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCEEE LKLADVEKLFGRR EEHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA