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The map label for this gene is coxD

Identifier: 146342848

GI number: 146342848

Start: 6250532

End: 6251419

Strand: Reverse

Name: coxD

Synonym: BRADO6028

Alternate gene names: NA

Gene position: 6251419-6250532 (Counterclockwise)

Preceding gene: 146342849

Following gene: 146342847

Centisome position: 83.84

GC content: 65.09

Gene sequence:

>888_bases
TTGAGAAAACAAACGCCTATGAAAACCCGCGACGACATCGCGCAATCTCTCGCCGCCTGCGGCTACATTGCCGATGGCGA
GCTGGCGACGGCGATTGCGCTGATGCAGCTGTTGAAGCGGCCGCTGCTGCTAGAGGGCGAGGCCGGCGTCGGCAAGACGG
AGGTGGCGAAGGCGCTGGCCGCGGTTGAAGGCACCGAGCTGATCCGGCTGCAATGCTATGAGGGACTCGACCAGAGCGCC
GCGCTGTATGAGTGGAACTACCAGCGCCAGCTGCTGGCGATCGAGGCGCATCGTGGCCACGCCGATGCCATCGAAGACCA
GATCTTCTCCGAGAAATATCTGCTCGAAAGGCCGCTGCTCGCTGCGATCCGCCGCGTCACCCCGCCGGTGCTGCTGATCG
ACGAGATCGACCGCGCCGACGACGAGTTCGAGGCATTCCTGCTGGAATTGCTGTCCGACTTCCAGATCTCGATTCCCGAG
CTCGGCACCATCACGGCGACCAGCATCCCGCACGTCGTCCTGACCTCCAACGGCACCCGCGAATTGTCCGACGCACTGCG
CCGCCGCTGCCTGTATCACTATGTCGACTATCCCGACGTCGACCGCGAGGCGCGCATCATCCTGGCGCGGATCGATGGCG
CCTCTGCCTCGCTTGCGCTGCAGATCGCGCGACTGGTCGAGGGTCTGCGCAAGGAGGAACTGCGCAAGGTGCCCGGTGTC
GCCGAGACGCTGGACTGGGCGGCGGCGCTGGTCGGGCTCGACGTCCGCGATCTCAAGGATCAGCCCGAGGTCGTCCATGA
CACGCTGATCTGCCTGCTGAAGACCCATGAAGACCGCGCGCGGGTCTCGCGCGAGGTAACCGCGCGCTTGCTGGGGAAGG
TCGCATGA

Upstream 100 bases:

>100_bases
GAGGGGTTGGGGTGGATGTCTCCGGCGGCAGTATCGCTTGGAGCCACCCCTCCTTAGCTCTCCCCCACATTGGGGGAATC
GCATCAAGGTCGCGGTAAGA

Downstream 100 bases:

>100_bases
GCTGCTGCGGCGCCACGCCCGACCACGAGGACCTGGACGCGGTGGCGCGTCTGGTCGCCGGCCGCCTCGGCGCGTTCCTT
CGGACATTGCGGGACAACGG

Product: carbon monoxide dehydrogenase CoxD accessory protein

Products: NA

Alternate protein names: ATPase AAA Family; AAA ATPase Central Domain Protein; AAA_5 ATPase; MoxR-Like ATPase; AAA Family ATPase; AAA ATPase; ATPase AAA Family Protein; ATPase Associated With Various Cellular Activities; Carbon Monoxide Dehydrogenase D Protein; Oxidoreductase; ATPase-Like Protein; MoxR Family ATPase; ATP-Dependent Protease; ATPase Aaa Family; ATPase Protein; ATPase Central Domain-Containing Protein; Aaa ATPase; Chaperone ClpB; Oligopeptide ABC Transporter; Membrane Oxidoreductase; Carbon Monoxide Dehydrogenase CoxD Accessory Protein; ATP-Dependent Protease LA Protein; MoxR-Like ATPases; CoxD-Like Protein; ATP-Dependent Protease Subunit; ATPase Associated With Various Cellular; Carbon Monoxide Dehydrogenase Accesory Protein; ClpA/ClpB Family Protein; AAA ATPase Family Protein; MoxR-Like ATPase CoxD

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MRKQTPMKTRDDIAQSLAACGYIADGELATAIALMQLLKRPLLLEGEAGVGKTEVAKALAAVEGTELIRLQCYEGLDQSA
ALYEWNYQRQLLAIEAHRGHADAIEDQIFSEKYLLERPLLAAIRRVTPPVLLIDEIDRADDEFEAFLLELLSDFQISIPE
LGTITATSIPHVVLTSNGTRELSDALRRRCLYHYVDYPDVDREARIILARIDGASASLALQIARLVEGLRKEELRKVPGV
AETLDWAAALVGLDVRDLKDQPEVVHDTLICLLKTHEDRARVSREVTARLLGKVA

Sequences:

>Translated_295_residues
MRKQTPMKTRDDIAQSLAACGYIADGELATAIALMQLLKRPLLLEGEAGVGKTEVAKALAAVEGTELIRLQCYEGLDQSA
ALYEWNYQRQLLAIEAHRGHADAIEDQIFSEKYLLERPLLAAIRRVTPPVLLIDEIDRADDEFEAFLLELLSDFQISIPE
LGTITATSIPHVVLTSNGTRELSDALRRRCLYHYVDYPDVDREARIILARIDGASASLALQIARLVEGLRKEELRKVPGV
AETLDWAAALVGLDVRDLKDQPEVVHDTLICLLKTHEDRARVSREVTARLLGKVA
>Mature_295_residues
MRKQTPMKTRDDIAQSLAACGYIADGELATAIALMQLLKRPLLLEGEAGVGKTEVAKALAAVEGTELIRLQCYEGLDQSA
ALYEWNYQRQLLAIEAHRGHADAIEDQIFSEKYLLERPLLAAIRRVTPPVLLIDEIDRADDEFEAFLLELLSDFQISIPE
LGTITATSIPHVVLTSNGTRELSDALRRRCLYHYVDYPDVDREARIILARIDGASASLALQIARLVEGLRKEELRKVPGV
AETLDWAAALVGLDVRDLKDQPEVVHDTLICLLKTHEDRARVSREVTARLLGKVA

Specific function: Unknown

COG id: COG0714

COG function: function code R; MoxR-like ATPases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32812; Mature: 32812

Theoretical pI: Translated: 4.85; Mature: 4.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKQTPMKTRDDIAQSLAACGYIADGELATAIALMQLLKRPLLLEGEAGVGKTEVAKALA
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
AVEGTELIRLQCYEGLDQSAALYEWNYQRQLLAIEAHRGHADAIEDQIFSEKYLLERPLL
HHCCCHHEEEHHHCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AAIRRVTPPVLLIDEIDRADDEFEAFLLELLSDFQISIPELGTITATSIPHVVLTSNGTR
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCH
ELSDALRRRCLYHYVDYPDVDREARIILARIDGASASLALQIARLVEGLRKEELRKVPGV
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AETLDWAAALVGLDVRDLKDQPEVVHDTLICLLKTHEDRARVSREVTARLLGKVA
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRKQTPMKTRDDIAQSLAACGYIADGELATAIALMQLLKRPLLLEGEAGVGKTEVAKALA
CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHH
AVEGTELIRLQCYEGLDQSAALYEWNYQRQLLAIEAHRGHADAIEDQIFSEKYLLERPLL
HHCCCHHEEEHHHCCCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHH
AAIRRVTPPVLLIDEIDRADDEFEAFLLELLSDFQISIPELGTITATSIPHVVLTSNGTR
HHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCEEEEECCCCH
ELSDALRRRCLYHYVDYPDVDREARIILARIDGASASLALQIARLVEGLRKEELRKVPGV
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCH
AETLDWAAALVGLDVRDLKDQPEVVHDTLICLLKTHEDRARVSREVTARLLGKVA
HHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA