| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is coxE
Identifier: 146342847
GI number: 146342847
Start: 6249330
End: 6250535
Strand: Reverse
Name: coxE
Synonym: BRADO6027
Alternate gene names: NA
Gene position: 6250535-6249330 (Counterclockwise)
Preceding gene: 146342848
Following gene: 146342846
Centisome position: 83.83
GC content: 69.9
Gene sequence:
>1206_bases ATGAGCTGCTGCGGCGCCACGCCCGACCACGAGGACCTGGACGCGGTGGCGCGTCTGGTCGCCGGCCGCCTCGGCGCGTT CCTTCGGACATTGCGGGACAACGGCTTCGCGGTTGGCCTGAAGGAAGGGCGGGACGCTGCGGCTGTCATGGCCGCGGGCT ATGCCGACAGGCCCGGCCTGCTGCGTTCCGCCTTCAAGCATCTGTTCGCGGCGCGGAAGAGCGAATGGGAGCGTTTCGAC GGGCTGTTCGATGCGTTCTGGCTCGGCAAGCGCGTGCGCTCGCGAGTTCTGACGTCGGGATCGGCGCAGGCGGCGAACAG CCCCTCCTTGAAGAGCCTGCAGGACGCAGGGGCCGGCGAGAGGGGGCCGCAGGGCGCGACCGACCAGGTGCCGGGCGACG AGACGCCGCGCGAGACTGGCGGCGAGGGCGTTCGCGAGGGCGCCTCGCGCGTGGAGACGATCGGCGACACTGATTTCCGC AGGCTTGCCGATCCCAACCAGGTCGCGCTGGCGCATGAGGCGGCGGCGCGGCTCGCGAAGGCGATGCGCACGCGGCTGAC GCGGCGCGACCAGCTGCGGCGCACGGGCGAGCGGCTCGATCTGCGCCGGACCATCCATCGCAACATCAGCCATGGCGGCG TGCCGATCGCGCTCGTGCATCGCCGCCGCAAGGTGAAGCCGCTGCGGCTGGTGGTGCTGCTCGATGCCTCCGGCTCGATG AGCGCCTACACCGCCGTGTTCCTGCGCTTCATCCACGGCGTGCTCGACGCATTTCGCGAGGCCGAAGCGTTCCTGTTTCA CACCCGGCTCGCCTACGTCTCCGATGCGATGAAGGAGCGGGACGCCGCGCGCGCGCTCGACCGGCTGTCGATGATGGCGC AGGGCGCGGGCGGCGGCACCCGCATCGGCGAAAGCCTGGCGACCTTCAACCGCTGGCACGCGGCGCGCGTGATTCATTCG CGCACCTGCGTGATGATCGTTTCCGACGGCTACGATACTGGCGATCCTGATTTGCTTGATCGCGAAATGGCGCAGCTGCG CCGCCGCTGCCGCCGCATCGTCTGGCTCAACCCCATGCTCGGTTGGGACAGCTACGCGCCCGAGGCGCGCGGCATCAAGG CCGCGCTGCCTTACGTCGATCTCTACGCGCCCGCGCACACGCTGAATTCGCTCGCGGCGCTGGAGCCGTATCTGGCGAAG TTGTGA
Upstream 100 bases:
>100_bases CCGAGGTCGTCCATGACACGCTGATCTGCCTGCTGAAGACCCATGAAGACCGCGCGCGGGTCTCGCGCGAGGTAACCGCG CGCTTGCTGGGGAAGGTCGC
Downstream 100 bases:
>100_bases GGCCATGCCGAAAAGAGGAGCTCATCCATGACAATGTCCACGGAGATGCTCGACCTCGCCGCGCAGTTGAAAGCCGCCGA TGAAAGCTTCGTGCTGGCCA
Product: carbon monoxide dehydrogenase CoxE accessory protein
Products: NA
Alternate protein names: VWA Containing CoxE-Like; VWA Containing CoxE-Like Protein; VWA Domain Containing CoxE-Like Protein; Carbon Monoxide Dehydrogenase E Protein; VWA Domain CoxE-Like Family Protein; Carbon Monoxide Dehydrogenase CoxE Subunit; Von Willebrand Factor Type A Domain-Containing Protein; Carbon Monoxide Dehydrogenase CoxE Accessory Protein; Carbon Monoxide Dehydrogenase Accessory Protein; CoxE Protein; Vwa Domain Coxe-Like Protein; VWA Domain-Containing CoxE-Like Family Protein; CoxE-Like Protein
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MSCCGATPDHEDLDAVARLVAGRLGAFLRTLRDNGFAVGLKEGRDAAAVMAAGYADRPGLLRSAFKHLFAARKSEWERFD GLFDAFWLGKRVRSRVLTSGSAQAANSPSLKSLQDAGAGERGPQGATDQVPGDETPRETGGEGVREGASRVETIGDTDFR RLADPNQVALAHEAAARLAKAMRTRLTRRDQLRRTGERLDLRRTIHRNISHGGVPIALVHRRRKVKPLRLVVLLDASGSM SAYTAVFLRFIHGVLDAFREAEAFLFHTRLAYVSDAMKERDAARALDRLSMMAQGAGGGTRIGESLATFNRWHAARVIHS RTCVMIVSDGYDTGDPDLLDREMAQLRRRCRRIVWLNPMLGWDSYAPEARGIKAALPYVDLYAPAHTLNSLAALEPYLAK L
Sequences:
>Translated_401_residues MSCCGATPDHEDLDAVARLVAGRLGAFLRTLRDNGFAVGLKEGRDAAAVMAAGYADRPGLLRSAFKHLFAARKSEWERFD GLFDAFWLGKRVRSRVLTSGSAQAANSPSLKSLQDAGAGERGPQGATDQVPGDETPRETGGEGVREGASRVETIGDTDFR RLADPNQVALAHEAAARLAKAMRTRLTRRDQLRRTGERLDLRRTIHRNISHGGVPIALVHRRRKVKPLRLVVLLDASGSM SAYTAVFLRFIHGVLDAFREAEAFLFHTRLAYVSDAMKERDAARALDRLSMMAQGAGGGTRIGESLATFNRWHAARVIHS RTCVMIVSDGYDTGDPDLLDREMAQLRRRCRRIVWLNPMLGWDSYAPEARGIKAALPYVDLYAPAHTLNSLAALEPYLAK L >Mature_400_residues SCCGATPDHEDLDAVARLVAGRLGAFLRTLRDNGFAVGLKEGRDAAAVMAAGYADRPGLLRSAFKHLFAARKSEWERFDG LFDAFWLGKRVRSRVLTSGSAQAANSPSLKSLQDAGAGERGPQGATDQVPGDETPRETGGEGVREGASRVETIGDTDFRR LADPNQVALAHEAAARLAKAMRTRLTRRDQLRRTGERLDLRRTIHRNISHGGVPIALVHRRRKVKPLRLVVLLDASGSMS AYTAVFLRFIHGVLDAFREAEAFLFHTRLAYVSDAMKERDAARALDRLSMMAQGAGGGTRIGESLATFNRWHAARVIHSR TCVMIVSDGYDTGDPDLLDREMAQLRRRCRRIVWLNPMLGWDSYAPEARGIKAALPYVDLYAPAHTLNSLAALEPYLAKL
Specific function: Unknown
COG id: COG3552
COG function: function code R; Protein containing von Willebrand factor type A (vWA) domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44097; Mature: 43966
Theoretical pI: Translated: 10.42; Mature: 10.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCCGATPDHEDLDAVARLVAGRLGAFLRTLRDNGFAVGLKEGRDAAAVMAAGYADRPGL CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCHH LRSAFKHLFAARKSEWERFDGLFDAFWLGKRVRSRVLTSGSAQAANSPSLKSLQDAGAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC RGPQGATDQVPGDETPRETGGEGVREGASRVETIGDTDFRRLADPNQVALAHEAAARLAK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHH AMRTRLTRRDQLRRTGERLDLRRTIHRNISHGGVPIALVHRRRKVKPLRLVVLLDASGSM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCH SAYTAVFLRFIHGVLDAFREAEAFLFHTRLAYVSDAMKERDAARALDRLSMMAQGAGGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RIGESLATFNRWHAARVIHSRTCVMIVSDGYDTGDPDLLDREMAQLRRRCRRIVWLNPML HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECCCCC GWDSYAPEARGIKAALPYVDLYAPAHTLNSLAALEPYLAKL CCCCCCCCCCCCHHHCCHHHHHCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SCCGATPDHEDLDAVARLVAGRLGAFLRTLRDNGFAVGLKEGRDAAAVMAAGYADRPGL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHCCCCCCCHH LRSAFKHLFAARKSEWERFDGLFDAFWLGKRVRSRVLTSGSAQAANSPSLKSLQDAGAGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCC RGPQGATDQVPGDETPRETGGEGVREGASRVETIGDTDFRRLADPNQVALAHEAAARLAK CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHH AMRTRLTRRDQLRRTGERLDLRRTIHRNISHGGVPIALVHRRRKVKPLRLVVLLDASGSM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCH SAYTAVFLRFIHGVLDAFREAEAFLFHTRLAYVSDAMKERDAARALDRLSMMAQGAGGGT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH RIGESLATFNRWHAARVIHSRTCVMIVSDGYDTGDPDLLDREMAQLRRRCRRIVWLNPML HHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEECCCCC GWDSYAPEARGIKAALPYVDLYAPAHTLNSLAALEPYLAKL CCCCCCCCCCCCHHHCCHHHHHCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA