| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is pgl [H]
Identifier: 146342645
GI number: 146342645
Start: 6018860
End: 6020107
Strand: Direct
Name: pgl [H]
Synonym: BRADO5812
Alternate gene names: 146342645
Gene position: 6018860-6020107 (Clockwise)
Preceding gene: 146342644
Following gene: 146342646
Centisome position: 80.72
GC content: 68.11
Gene sequence:
>1248_bases ATGCCCTCTCCCGAGCTGGTGCGCGTCGCCGACAAGGCGGCGATGGCGCAGGCCGCCGCCGATGTCCTGCTCGTACGCAT CGCCGCCAATCCCGGCCGTGTCGCCATCTGCCTCACCGGCGGCTCCAGTCCGAAGCAGCTCTATGAGCTCTTGGCGACGG ACGCCTATCGCGACCGCATTCCCTGGCCGCGCGTGCACTGGTTCATCGGCGATGAGCGTTTTGTTCCGCCCGGCGATCCG CTGCACAACATGACCATGGCGCGCCGCGCCTTCCTCGACGCCTGCGCGCCCGCGTCCAATATCCATCCGATCCCGACGGA GACGAGCAGTCCCGAGAGCAGCGCGGCGGCCTATGCGCGCGAGCTGATGGCATTCTACGGCGCGAACGTGCTCGATCCGG CGCGGCCGCTGTTCGATCTCGTGCTGCTCGGCATCGGGCCGGATGGCCACGTCGCCTCGCTGTTTCCAGGCTTTCCGGCG GTCGACGTCAGGGATCGCTGGGTGGTCGGCGTCGACAAGGCGCATGTCGCGCCGTTCGTGCCGCGGGTCAGCCTGACGCT GCCTGTGCTCGCCTCCTGTCGCACCATGTTGTTCGAGGTGGGCGGGGCGGACAAGCGGCCGATCCTGACGCGCGTTCTGG CCGGCGAAGACCTGCCGGCCAATCGCGCGCGGTCGAATGAGAGGACGACATTTCTCATCGATGATTCGGCGTGGCCGGGG CCATCGGCGACGCTCCCCCACGCGCTGATCGTCATGGGCGTGTCGAGCTCGGGAAAGAGCACGGTCGGCCAGGCGCTGGG CCGGCGCCTCGGCTGGCGGTTCGAGGACGGCGACAACTTTCATCCGCCCGCCAACGTCGCCAAGATGAGCGCGGGCCAGC CGCTGACCGACGAGGATCGCTGGCCCTGGCTGCGGGCGATCGCGGACGAGATCGCGCGCTGCCGCGCCAAGGGCGAGCGC ATCATCATCGCCTGCTCGGCGCTCAAGAAGGCATACCGCAAAATCCTGGCCGGTGATCCCCATGACGTCCGCCTCATCTA TCTCGAAGGCGACCGCGAGCTGATCGGCGACCGCATGGGCCACCGCAAGGGCCATTTCATGCCGCCCGGGCTGCTCGACA GCCAGTTCGCGACCTTGGAACCACCCGGCGCCGACGAGCATCCTATCAAGGTCTCGGTCAACGCGCCGGTCGAGCATATC GTCGACGACGTCCTGCAACAGCTTGCAATCGGTCGGGACCGTGCCTGA
Upstream 100 bases:
>100_bases CTGCACAGCTACGAGGCGGGCAGCGAGGGGCCCAAGGCTGCTGCCGACCTGCTCGCGCGCGACGGCCGCAGCTGGCGCAA GCTGGCCTGAGGCGATGGGC
Downstream 100 bases:
>100_bases CCACGAATGGAAGGGCTCATGACCCGCATCGCTCTCGTCGTGTCCGATGTCGACGGCACGCTGCTGACCAAGGACAAGGT CCTCACCGAGCGCGCGGCCA
Product: putative bifunctional 6-phosphogluconolactonase (N-terminal) (Pgl)/D-gluconate kinase (C-terminal)
Products: NA
Alternate protein names: 6PGL [H]
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MPSPELVRVADKAAMAQAAADVLLVRIAANPGRVAICLTGGSSPKQLYELLATDAYRDRIPWPRVHWFIGDERFVPPGDP LHNMTMARRAFLDACAPASNIHPIPTETSSPESSAAAYARELMAFYGANVLDPARPLFDLVLLGIGPDGHVASLFPGFPA VDVRDRWVVGVDKAHVAPFVPRVSLTLPVLASCRTMLFEVGGADKRPILTRVLAGEDLPANRARSNERTTFLIDDSAWPG PSATLPHALIVMGVSSSGKSTVGQALGRRLGWRFEDGDNFHPPANVAKMSAGQPLTDEDRWPWLRAIADEIARCRAKGER IIIACSALKKAYRKILAGDPHDVRLIYLEGDRELIGDRMGHRKGHFMPPGLLDSQFATLEPPGADEHPIKVSVNAPVEHI VDDVLQQLAIGRDRA
Sequences:
>Translated_415_residues MPSPELVRVADKAAMAQAAADVLLVRIAANPGRVAICLTGGSSPKQLYELLATDAYRDRIPWPRVHWFIGDERFVPPGDP LHNMTMARRAFLDACAPASNIHPIPTETSSPESSAAAYARELMAFYGANVLDPARPLFDLVLLGIGPDGHVASLFPGFPA VDVRDRWVVGVDKAHVAPFVPRVSLTLPVLASCRTMLFEVGGADKRPILTRVLAGEDLPANRARSNERTTFLIDDSAWPG PSATLPHALIVMGVSSSGKSTVGQALGRRLGWRFEDGDNFHPPANVAKMSAGQPLTDEDRWPWLRAIADEIARCRAKGER IIIACSALKKAYRKILAGDPHDVRLIYLEGDRELIGDRMGHRKGHFMPPGLLDSQFATLEPPGADEHPIKVSVNAPVEHI VDDVLQQLAIGRDRA >Mature_414_residues PSPELVRVADKAAMAQAAADVLLVRIAANPGRVAICLTGGSSPKQLYELLATDAYRDRIPWPRVHWFIGDERFVPPGDPL HNMTMARRAFLDACAPASNIHPIPTETSSPESSAAAYARELMAFYGANVLDPARPLFDLVLLGIGPDGHVASLFPGFPAV DVRDRWVVGVDKAHVAPFVPRVSLTLPVLASCRTMLFEVGGADKRPILTRVLAGEDLPANRARSNERTTFLIDDSAWPGP SATLPHALIVMGVSSSGKSTVGQALGRRLGWRFEDGDNFHPPANVAKMSAGQPLTDEDRWPWLRAIADEIARCRAKGERI IIACSALKKAYRKILAGDPHDVRLIYLEGDRELIGDRMGHRKGHFMPPGLLDSQFATLEPPGADEHPIKVSVNAPVEHIV DDVLQQLAIGRDRA
Specific function: Hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate [H]
COG id: COG3265
COG function: function code G; Gluconate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily [H]
Homologues:
Organism=Homo sapiens, GI299758445, Length=183, Percent_Identity=45.9016393442623, Blast_Score=160, Evalue=1e-39, Organism=Homo sapiens, GI52145310, Length=217, Percent_Identity=35.0230414746544, Blast_Score=95, Evalue=1e-19, Organism=Homo sapiens, GI6912586, Length=250, Percent_Identity=33.2, Blast_Score=86, Evalue=9e-17, Organism=Escherichia coli, GI1790719, Length=171, Percent_Identity=45.6140350877193, Blast_Score=142, Evalue=5e-35, Organism=Escherichia coli, GI87082265, Length=168, Percent_Identity=41.6666666666667, Blast_Score=136, Evalue=3e-33, Organism=Caenorhabditis elegans, GI25146487, Length=172, Percent_Identity=48.2558139534884, Blast_Score=142, Evalue=3e-34, Organism=Caenorhabditis elegans, GI115533060, Length=223, Percent_Identity=27.3542600896861, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533058, Length=223, Percent_Identity=27.3542600896861, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6320454, Length=148, Percent_Identity=36.4864864864865, Blast_Score=103, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6319918, Length=217, Percent_Identity=33.1797235023041, Blast_Score=92, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324362, Length=214, Percent_Identity=31.7757009345794, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6321687, Length=213, Percent_Identity=34.7417840375587, Blast_Score=90, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6321957, Length=217, Percent_Identity=30.8755760368664, Blast_Score=88, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005900 - InterPro: IPR006148 [H]
Pfam domain/function: PF01182 Glucosamine_iso [H]
EC number: =3.1.1.31 [H]
Molecular weight: Translated: 45091; Mature: 44960
Theoretical pI: Translated: 7.15; Mature: 7.15
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSPELVRVADKAAMAQAAADVLLVRIAANPGRVAICLTGGSSPKQLYELLATDAYRDRI CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC PWPRVHWFIGDERFVPPGDPLHNMTMARRAFLDACAPASNIHPIPTETSSPESSAAAYAR CCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH ELMAFYGANVLDPARPLFDLVLLGIGPDGHVASLFPGFPAVDVRDRWVVGVDKAHVAPFV HHHHHHCCCCCCHHHHHHHHHHEECCCCCCCHHHCCCCCCCCCCCCEEEECCHHHHCCCC PRVSLTLPVLASCRTMLFEVGGADKRPILTRVLAGEDLPANRARSNERTTFLIDDSAWPG CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCC PSATLPHALIVMGVSSSGKSTVGQALGRRLGWRFEDGDNFHPPANVAKMSAGQPLTDEDR CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHCCCCCCCCCCC WPWLRAIADEIARCRAKGERIIIACSALKKAYRKILAGDPHDVRLIYLEGDRELIGDRMG CHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHC HRKGHFMPPGLLDSQFATLEPPGADEHPIKVSVNAPVEHIVDDVLQQLAIGRDRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PSPELVRVADKAAMAQAAADVLLVRIAANPGRVAICLTGGSSPKQLYELLATDAYRDRI CCCHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHCC PWPRVHWFIGDERFVPPGDPLHNMTMARRAFLDACAPASNIHPIPTETSSPESSAAAYAR CCCEEEEEECCCEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH ELMAFYGANVLDPARPLFDLVLLGIGPDGHVASLFPGFPAVDVRDRWVVGVDKAHVAPFV HHHHHHCCCCCCHHHHHHHHHHEECCCCCCCHHHCCCCCCCCCCCCEEEECCHHHHCCCC PRVSLTLPVLASCRTMLFEVGGADKRPILTRVLAGEDLPANRARSNERTTFLIDDSAWPG CCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCC PSATLPHALIVMGVSSSGKSTVGQALGRRLGWRFEDGDNFHPPANVAKMSAGQPLTDEDR CCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEECCCCCCCCCCHHHHHCCCCCCCCCCC WPWLRAIADEIARCRAKGERIIIACSALKKAYRKILAGDPHDVRLIYLEGDRELIGDRMG CHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHC HRKGHFMPPGLLDSQFATLEPPGADEHPIKVSVNAPVEHIVDDVLQQLAIGRDRA CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11759840 [H]