| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342187
Identifier: 146342187
GI number: 146342187
Start: 5551336
End: 5551950
Strand: Reverse
Name: 146342187
Synonym: BRADO5338
Alternate gene names: NA
Gene position: 5551950-5551336 (Counterclockwise)
Preceding gene: 146342188
Following gene: 146342186
Centisome position: 74.46
GC content: 66.83
Gene sequence:
>615_bases ATGGCGCGCCCCCGACGCAGCAAGCCCCTTCGCACGTCCAAGATCCAGCACTCCAGCACTCACGATCGTCGCGCTCAGGA GCTGACGCGCCATGCCGACGTGGTTCCGGTCGAGATCGATGATCCCTTGGCGCTCGAGCCTGGCGAGAAGATCGTGACGC TGCGATCGGTGCGCAACGATCCGCTGGGTCGGCTCCATGCGCACAAGCAGCTCGACGACGCCCAGTATCGGGCGGGGCGG GCGTTCCAGAACGACTGGGAGCGGGCCGAGCGGGGCCCGCAGGCGATCGATCCGTCGCGCGAGCATGTCGACGGCGCGCG CGGGCGTGAGCCGGTCACCGAAAGTCAAAGACAGGCGGTGCTCCGGCTGAATCGGGCCGAGCGCGAGCTCGGTCTGGATG GAGCGGCGATCACCCATGACGTCCTGGTGCATGGCTTGACGATGGAACAGGTTGGGCAGAAGCGCGGATTGGCCAGCCAG CGCTGGAACGACTATTTTGCGCGCCGCTTCAAGGAGTGCCTGGATCGCCTGGCTGTGGTCTATGGCTTTTCCACCGGTCG GGTCGCAAGCCACGATGACCGCAGGGGGCGATCGGACTCCCGCATCGACCGCTAG
Upstream 100 bases:
>100_bases TGTTCGTCCCGCCGGCCCTCTGGTCCTGCGGCTGGTCGCGGCCGCCTAGCGCGGCGAACCCGATCACACCTGACCCCATT CCATCTTCCGGAGACGAGAC
Downstream 100 bases:
>100_bases CGGCAAATTGGGCCATCGCTCATGCGATCGACATGGACGATGGCCAGCGAGCCGAAAATCGTTCGGTTGAAAATGAATGT CATGAGTTCCTGTCCGCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MARPRRSKPLRTSKIQHSSTHDRRAQELTRHADVVPVEIDDPLALEPGEKIVTLRSVRNDPLGRLHAHKQLDDAQYRAGR AFQNDWERAERGPQAIDPSREHVDGARGREPVTESQRQAVLRLNRAERELGLDGAAITHDVLVHGLTMEQVGQKRGLASQ RWNDYFARRFKECLDRLAVVYGFSTGRVASHDDRRGRSDSRIDR
Sequences:
>Translated_204_residues MARPRRSKPLRTSKIQHSSTHDRRAQELTRHADVVPVEIDDPLALEPGEKIVTLRSVRNDPLGRLHAHKQLDDAQYRAGR AFQNDWERAERGPQAIDPSREHVDGARGREPVTESQRQAVLRLNRAERELGLDGAAITHDVLVHGLTMEQVGQKRGLASQ RWNDYFARRFKECLDRLAVVYGFSTGRVASHDDRRGRSDSRIDR >Mature_203_residues ARPRRSKPLRTSKIQHSSTHDRRAQELTRHADVVPVEIDDPLALEPGEKIVTLRSVRNDPLGRLHAHKQLDDAQYRAGRA FQNDWERAERGPQAIDPSREHVDGARGREPVTESQRQAVLRLNRAERELGLDGAAITHDVLVHGLTMEQVGQKRGLASQR WNDYFARRFKECLDRLAVVYGFSTGRVASHDDRRGRSDSRIDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23319; Mature: 23188
Theoretical pI: Translated: 10.60; Mature: 10.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPRRSKPLRTSKIQHSSTHDRRAQELTRHADVVPVEIDDPLALEPGEKIVTLRSVRND CCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEHHHHHCCC PLGRLHAHKQLDDAQYRAGRAFQNDWERAERGPQAIDPSREHVDGARGREPVTESQRQAV CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH LRLNRAERELGLDGAAITHDVLVHGLTMEQVGQKRGLASQRWNDYFARRFKECLDRLAVV HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YGFSTGRVASHDDRRGRSDSRIDR HCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure ARPRRSKPLRTSKIQHSSTHDRRAQELTRHADVVPVEIDDPLALEPGEKIVTLRSVRND CCCCCCCCCCHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCEEHHHHHCCC PLGRLHAHKQLDDAQYRAGRAFQNDWERAERGPQAIDPSREHVDGARGREPVTESQRQAV CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCHHHHHHHH LRLNRAERELGLDGAAITHDVLVHGLTMEQVGQKRGLASQRWNDYFARRFKECLDRLAVV HHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH YGFSTGRVASHDDRRGRSDSRIDR HCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA