| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146342188
Identifier: 146342188
GI number: 146342188
Start: 5552002
End: 5552559
Strand: Reverse
Name: 146342188
Synonym: BRADO5339
Alternate gene names: NA
Gene position: 5552559-5552002 (Counterclockwise)
Preceding gene: 146342191
Following gene: 146342187
Centisome position: 74.47
GC content: 70.97
Gene sequence:
>558_bases ATGCAGTCCACCGACTGGCCAGACCACCACTCCAGGATGCTGTGCGAGCTCCATGCCAAGGGGCTCTCTTATGCCGAGAT CGCGCGCGCCCTCAATGCGCAGTTCGGGACGGCCTATACGCGCAATGCGACGCTCGGCCGCGGCAAGCGCATCGGGCTCG TGGCGCCCGCGTCCAAGGGAGAGTTCAAGGCCGAGTTCGAGTCCGTCCGTTGCGAGCCCCGGGCGATGTCTGCCGCGGCC GCACCCGGACGACGGAGCCCGGACGCCGGCGTGCGGCCGGTCGCGATGCCCCGGTCGCCAAAGGCGGCCGCGCGGGTCAA GCTGCGCTCGGTCGGCATCAGTCCGCGGCTGCTGGCGTTCGACCAGCTCGCGCCCGATGATTGCCGCTACCCCTATGGTG GCGACCGCGACGGCGATCCGATCACCTTTTGCGGCCATCCGCGCCAGCCGGGCTCCTGCTATTGCACCCCCCACCATCAG CTGACGCGGACTCCGCCCGAGGAGACCGCTGTTCGTCCCGCCGGCCCTCTGGTCCTGCGGCTGGTCGCGGCCGCCTAG
Upstream 100 bases:
>100_bases CGATTTATCAGAACTCAAGCTTGACTTTTTCTTCGGAATAACGGAAATTGAGCCGTCGGGCAAGAGCCTTCGGCGCCCGA TCCAGAAGAAAGAGGCGAGA
Downstream 100 bases:
>100_bases CGCGGCGAACCCGATCACACCTGACCCCATTCCATCTTCCGGAGACGAGACATGGCGCGCCCCCGACGCAGCAAGCCCCT TCGCACGTCCAAGATCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MQSTDWPDHHSRMLCELHAKGLSYAEIARALNAQFGTAYTRNATLGRGKRIGLVAPASKGEFKAEFESVRCEPRAMSAAA APGRRSPDAGVRPVAMPRSPKAAARVKLRSVGISPRLLAFDQLAPDDCRYPYGGDRDGDPITFCGHPRQPGSCYCTPHHQ LTRTPPEETAVRPAGPLVLRLVAAA
Sequences:
>Translated_185_residues MQSTDWPDHHSRMLCELHAKGLSYAEIARALNAQFGTAYTRNATLGRGKRIGLVAPASKGEFKAEFESVRCEPRAMSAAA APGRRSPDAGVRPVAMPRSPKAAARVKLRSVGISPRLLAFDQLAPDDCRYPYGGDRDGDPITFCGHPRQPGSCYCTPHHQ LTRTPPEETAVRPAGPLVLRLVAAA >Mature_185_residues MQSTDWPDHHSRMLCELHAKGLSYAEIARALNAQFGTAYTRNATLGRGKRIGLVAPASKGEFKAEFESVRCEPRAMSAAA APGRRSPDAGVRPVAMPRSPKAAARVKLRSVGISPRLLAFDQLAPDDCRYPYGGDRDGDPITFCGHPRQPGSCYCTPHHQ LTRTPPEETAVRPAGPLVLRLVAAA
Specific function: Unknown
COG id: COG5352
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19970; Mature: 19970
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTDWPDHHSRMLCELHAKGLSYAEIARALNAQFGTAYTRNATLGRGKRIGLVAPASKG CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCC EFKAEFESVRCEPRAMSAAAAPGRRSPDAGVRPVAMPRSPKAAARVKLRSVGISPRLLAF CHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHCCCCCCEEEC DQLAPDDCRYPYGGDRDGDPITFCGHPRQPGSCYCTPHHQLTRTPPEETAVRPAGPLVLR CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHCCCCCCCHHHHH LVAAA HHHCC >Mature Secondary Structure MQSTDWPDHHSRMLCELHAKGLSYAEIARALNAQFGTAYTRNATLGRGKRIGLVAPASKG CCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCC EFKAEFESVRCEPRAMSAAAAPGRRSPDAGVRPVAMPRSPKAAARVKLRSVGISPRLLAF CHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHEEHHHCCCCCCEEEC DQLAPDDCRYPYGGDRDGDPITFCGHPRQPGSCYCTPHHQLTRTPPEETAVRPAGPLVLR CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEECCCCCCCCCCCHHCCCCCCCHHHHH LVAAA HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA