| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146342186
Identifier: 146342186
GI number: 146342186
Start: 5550573
End: 5551001
Strand: Reverse
Name: 146342186
Synonym: BRADO5336
Alternate gene names: NA
Gene position: 5551001-5550573 (Counterclockwise)
Preceding gene: 146342187
Following gene: 146342184
Centisome position: 74.44
GC content: 64.34
Gene sequence:
>429_bases ATGGTTGGTCATCAGTATCTGTTCCGGTCGGCGAGCGCGAAGCTCGCGCTTGCTGCAGTCATGGCGACCGTGCTCACGGC GGCTCAGTCCGCGCCGACCTCGGCGCGAGCGGCAGGTCCGAGCACGCATCCGTCGGTGATCAAGGCGGCCGCAAGCGATG TGACGGATGTCAGTGCGCGGCGGCGTCATCGCCATGTCTATCGGGGCAACCCGGCCGCGGGTCTCGCCATCATGGGCGCA ATGATCGGGACGTTCGGCGCGATTGCGGCGCACTCGCACGACGACGACTACTACTATGGACCGGGCTACTACGCCGGACC CGGCTACTATGGCCCGCCGGTGTATTATGCCCCCCAGCCGTATTACGTGCGTCCGTACTACGGTCATCCGTACTACGGCC CACGTGTCCACTATTATCATCCGTACTGA
Upstream 100 bases:
>100_bases GAACGGCGCATGCGCCCGGGGCCGATGCTGTGTTGATGCAGGTCAACCGCCCCACGACGCCATGTTGTAATCGAGACGAG CGGAAAAGACGGGGGATATC
Downstream 100 bases:
>100_bases GGATGGAGGTCGGCGCCGCGGCTTTCACGCGGCGGCGTCTGCCTAGAAGCCGCCGGCGCTGAAGCGGAACGGTTGCACGA CGTCATACGCCGCCTTGCTG
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MVGHQYLFRSASAKLALAAVMATVLTAAQSAPTSARAAGPSTHPSVIKAAASDVTDVSARRRHRHVYRGNPAAGLAIMGA MIGTFGAIAAHSHDDDYYYGPGYYAGPGYYGPPVYYAPQPYYVRPYYGHPYYGPRVHYYHPY
Sequences:
>Translated_142_residues MVGHQYLFRSASAKLALAAVMATVLTAAQSAPTSARAAGPSTHPSVIKAAASDVTDVSARRRHRHVYRGNPAAGLAIMGA MIGTFGAIAAHSHDDDYYYGPGYYAGPGYYGPPVYYAPQPYYVRPYYGHPYYGPRVHYYHPY >Mature_142_residues MVGHQYLFRSASAKLALAAVMATVLTAAQSAPTSARAAGPSTHPSVIKAAASDVTDVSARRRHRHVYRGNPAAGLAIMGA MIGTFGAIAAHSHDDDYYYGPGYYAGPGYYGPPVYYAPQPYYVRPYYGHPYYGPRVHYYHPY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15406; Mature: 15406
Theoretical pI: Translated: 9.62; Mature: 9.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGHQYLFRSASAKLALAAVMATVLTAAQSAPTSARAAGPSTHPSVIKAAASDVTDVSAR CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RRHRHVYRGNPAAGLAIMGAMIGTFGAIAAHSHDDDYYYGPGYYAGPGYYGPPVYYAPQP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEECCCC YYVRPYYGHPYYGPRVHYYHPY CEEECCCCCCCCCCEEEEECCC >Mature Secondary Structure MVGHQYLFRSASAKLALAAVMATVLTAAQSAPTSARAAGPSTHPSVIKAAASDVTDVSAR CCCHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH RRHRHVYRGNPAAGLAIMGAMIGTFGAIAAHSHDDDYYYGPGYYAGPGYYGPPVYYAPQP HHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCCCCCEECCCC YYVRPYYGHPYYGPRVHYYHPY CEEECCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA