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The map label for this gene is arnB [H]

Identifier: 146342051

GI number: 146342051

Start: 5401317

End: 5402444

Strand: Direct

Name: arnB [H]

Synonym: BRADO5191

Alternate gene names: 146342051

Gene position: 5401317-5402444 (Clockwise)

Preceding gene: 146342050

Following gene: 146342052

Centisome position: 72.44

GC content: 60.73

Gene sequence:

>1128_bases
ATGACCCCCATACAGTTCGCGCTACCCTATTTCGGACCGGAGGAAGCCGCAGCGGCGGCCGCCGCCGTTCAAAGCGGCTG
GGTGGTCGGCGGGCCTCGGCTGAGAGAGCTCGAAACCGCGTTTGCAGACCATTGCGGCGTCTCCCACGGCGTGGGTGTGT
CGTCCTGGACCACCGGCGCATTCCTGGTGCTCAAAACTCTCGGGATCGGACCGGGCGACGAGGTTCTGGTACCTTCGTTG
ACATTTATCGCGACCGTCAACGCAATCGTTCACGTCGGCGCCACACCGGTATTCGTCGACGTTCATCCTGGAACGTATAA
CATCGATCCAGCCGACATTCCCGAGAAGATCACATCACGCACGCGGGCCATCCTGCCGGTCGACCAGTTGGGGCTCCCAT
GCGACATCGACGAGATCAGCCGGATTGCATCGGCAAACGATCTGCTGCTGATCGCCGACGCCGCCTGCTCCTTTGGAAGC
GCGTTTCGCGGTGTCGCGGTTGGAAGTCAAGCGACAATCACGATCTTCAGCCTGCACGCCCGAAAGATCATCACGACGGG
CGAAGGCGGCATGATCGTCACCAACGACGGCGACTTCGCAGAACGTTTGCGAAGGCAGCGGCATCAGGGCATGTCCCTCT
CAGACTATCAGCGCCATGGCCAATTGCCGACGATGTTCGAGACCTACCCGGAGGTCGGTTACAATTTCAGGATCACCGAC
GTTCAGGCAGCGATCGGGGTCGCGCAATTGGCTCGCCTGCCCGAGATGCTGCGGTTGAGACGTGAGATAGCGCAGCACTA
TCTCTCCCGTCTTGATGGACATCCTGACCTGATCATGCCGCTCGTACCTGATCACGTGACGCCCAACTGGCAGTCGTTTC
AAATCCGGCTGCGCGAAGGCGCAAGACTAACTCGCAACCAACTGATGGAGCGCCTCCACGAACGTGGCGTACCTACCCGC
CGCGGTGTGATGGCCTCCCACATGGAGCCTCCTTACCGTTCACATTGCGCGATCCTGCCCGTGACGGAACTGCTGGCTCG
GCAATGCCTGCAGCTCCCGATGCATCCCCGCCTGACAGCAGACCAGATCGATTTCATAGCTGACGAGCTGACGGACGCGC
TGAAGTAG

Upstream 100 bases:

>100_bases
ACCTCGACTGGTTCCGCCTCAAGCATTCAGACCCGTCTCAACTGATCGAGCGGGACATCGTGAATTGGACCATGCCCACC
GCACCCGACCAACCCGCGCC

Downstream 100 bases:

>100_bases
GTAAGCTCTGGATCGATGAGTCAGCTCAAACCGCAATACAGATGACGATGGATCAGGTCCCGATATCACGTTCGCAGCTC
CCCGCACATCTGAAGCGGCT

Product: putative DegT/DnrJ/EryC1/StrS aminotransferase family protein

Products: NA

Alternate protein names: UDP-(beta-L-threo-pentapyranosyl-4''-ulose diphosphate) aminotransferase; UDP-Ara4O aminotransferase; UDP-4-amino-4-deoxy-L-arabinose aminotransferase [H]

Number of amino acids: Translated: 375; Mature: 374

Protein sequence:

>375_residues
MTPIQFALPYFGPEEAAAAAAAVQSGWVVGGPRLRELETAFADHCGVSHGVGVSSWTTGAFLVLKTLGIGPGDEVLVPSL
TFIATVNAIVHVGATPVFVDVHPGTYNIDPADIPEKITSRTRAILPVDQLGLPCDIDEISRIASANDLLLIADAACSFGS
AFRGVAVGSQATITIFSLHARKIITTGEGGMIVTNDGDFAERLRRQRHQGMSLSDYQRHGQLPTMFETYPEVGYNFRITD
VQAAIGVAQLARLPEMLRLRREIAQHYLSRLDGHPDLIMPLVPDHVTPNWQSFQIRLREGARLTRNQLMERLHERGVPTR
RGVMASHMEPPYRSHCAILPVTELLARQCLQLPMHPRLTADQIDFIADELTDALK

Sequences:

>Translated_375_residues
MTPIQFALPYFGPEEAAAAAAAVQSGWVVGGPRLRELETAFADHCGVSHGVGVSSWTTGAFLVLKTLGIGPGDEVLVPSL
TFIATVNAIVHVGATPVFVDVHPGTYNIDPADIPEKITSRTRAILPVDQLGLPCDIDEISRIASANDLLLIADAACSFGS
AFRGVAVGSQATITIFSLHARKIITTGEGGMIVTNDGDFAERLRRQRHQGMSLSDYQRHGQLPTMFETYPEVGYNFRITD
VQAAIGVAQLARLPEMLRLRREIAQHYLSRLDGHPDLIMPLVPDHVTPNWQSFQIRLREGARLTRNQLMERLHERGVPTR
RGVMASHMEPPYRSHCAILPVTELLARQCLQLPMHPRLTADQIDFIADELTDALK
>Mature_374_residues
TPIQFALPYFGPEEAAAAAAAVQSGWVVGGPRLRELETAFADHCGVSHGVGVSSWTTGAFLVLKTLGIGPGDEVLVPSLT
FIATVNAIVHVGATPVFVDVHPGTYNIDPADIPEKITSRTRAILPVDQLGLPCDIDEISRIASANDLLLIADAACSFGSA
FRGVAVGSQATITIFSLHARKIITTGEGGMIVTNDGDFAERLRRQRHQGMSLSDYQRHGQLPTMFETYPEVGYNFRITDV
QAAIGVAQLARLPEMLRLRREIAQHYLSRLDGHPDLIMPLVPDHVTPNWQSFQIRLREGARLTRNQLMERLHERGVPTRR
GVMASHMEPPYRSHCAILPVTELLARQCLQLPMHPRLTADQIDFIADELTDALK

Specific function: Catalyzes the conversion of UDP-4-keto-arabinose (UDP- Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family. ArnB subfamily [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=372, Percent_Identity=39.5161290322581, Blast_Score=224, Evalue=8e-60,
Organism=Escherichia coli, GI2367285, Length=284, Percent_Identity=34.8591549295775, Blast_Score=144, Evalue=9e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022850
- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: =2.6.1.87 [H]

Molecular weight: Translated: 41101; Mature: 40970

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPIQFALPYFGPEEAAAAAAAVQSGWVVGGPRLRELETAFADHCGVSHGVGVSSWTTGA
CCCCEEECCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
FLVLKTLGIGPGDEVLVPSLTFIATVNAIVHVGATPVFVDVHPGTYNIDPADIPEKITSR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
TRAILPVDQLGLPCDIDEISRIASANDLLLIADAACSFGSAFRGVAVGSQATITIFSLHA
HHEECCHHHCCCCCCHHHHHHHHCCCCEEEEECCHHCCCHHHHCEEECCCCEEEEEEEEC
RKIITTGEGGMIVTNDGDFAERLRRQRHQGMSLSDYQRHGQLPTMFETYPEVGYNFRITD
EEEEEECCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCEEEEEH
VQAAIGVAQLARLPEMLRLRREIAQHYLSRLDGHPDLIMPLVPDHVTPNWQSFQIRLREG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHEEEEECCC
ARLTRNQLMERLHERGVPTRRGVMASHMEPPYRSHCAILPVTELLARQCLQLPMHPRLTA
CHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCHHHCEEEECHHHHHHHHHHHCCCCCCCCH
DQIDFIADELTDALK
HHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPIQFALPYFGPEEAAAAAAAVQSGWVVGGPRLRELETAFADHCGVSHGVGVSSWTTGA
CCCEEECCCCCHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHH
FLVLKTLGIGPGDEVLVPSLTFIATVNAIVHVGATPVFVDVHPGTYNIDPADIPEKITSR
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCHHHHHHHHHHH
TRAILPVDQLGLPCDIDEISRIASANDLLLIADAACSFGSAFRGVAVGSQATITIFSLHA
HHEECCHHHCCCCCCHHHHHHHHCCCCEEEEECCHHCCCHHHHCEEECCCCEEEEEEEEC
RKIITTGEGGMIVTNDGDFAERLRRQRHQGMSLSDYQRHGQLPTMFETYPEVGYNFRITD
EEEEEECCCCEEEECCCHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHCCCCEEEEEH
VQAAIGVAQLARLPEMLRLRREIAQHYLSRLDGHPDLIMPLVPDHVTPNWQSFQIRLREG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCHHEEEEECCC
ARLTRNQLMERLHERGVPTRRGVMASHMEPPYRSHCAILPVTELLARQCLQLPMHPRLTA
CHHHHHHHHHHHHHCCCCHHHCHHHHCCCCCHHHCEEEECHHHHHHHHHHHCCCCCCCCH
DQIDFIADELTDALK
HHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA